RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 DAAM1Q9Y4D1 1078 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 DAGLAQ9Y4D2 1042 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 PCDHAC2Q9Y5I4 1007 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 HTTP42858 3142 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 RLFQ13129 1914 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 TRAV20A0A0B4J274 112 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 CFAP69A5D8W1 941 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 FOXN1O15353 648 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 ZNF500O60304 480 aaPredicted RBP6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 HSPA8P11142 646 aaKnown RBP6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 BMP6P22004 513 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 MCAMP43121 646 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 PPM1FP49593 454 aaPredicted RBP6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 CTCFP49711 727 aaPredicted RBP6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 RPL6Q02878 288 aaKnown RBP6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 G3BP1Q13283 466 aaKnown RBP eCLIP6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 SUPT20HL1Q3ZLR7 823 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 FAM83BQ5T0W9 1011 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 SYDE2Q5VT97 1194 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 ANO1Q5XXA6 986 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 PDZD3Q86UT5 571 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 TMEM40Q8WWA1 233 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 EXOC2Q96KP1 924 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 INO80BQ9C086 356 aaPredicted RBP6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 CCDC8Q9H0W5 538 aaPredicted RBP6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 PTPRHQ9HD43 1115 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 TPSG1Q9NRR2 321 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 HMG20BQ9P0W2 317 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 PUF60Q9UHX1 559 aaKnown RBP6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 DBNLQ9UJU6 430 aaKnown RBP6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 TRHDEQ9UKU6 1024 aa6.92□□□□□ -1.3
TMEM39A-212ENST00000497993 TRBV23-1A0A0A0MS06 115 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 GPR75-ASB3A0A0A6YYF3 556 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 ANO9A1A5B4 782 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 SART1O43290 800 aaKnown RBP6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 HMMRO75330 724 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 ENTPD3O75355 529 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 FBXO21O94952 628 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 ECEL1O95672 775 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 CTSBP07858 339 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 NAT2P11245 290 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 POU3F2P20265 443 aaPredicted RBP6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 TM4SF4P48230 202 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 TIMM10P62072 90 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 ZNF252P-AS1Q0IIN9 211 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 DOC2BQ14184 412 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 MINDY4Q4G0A6 757 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 NOL9Q5SY16 702 aaKnown RBP6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 FOXB2Q5VYV0 432 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 IL31Q6EBC2 164 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 ERAP2Q6P179 960 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 CCDC174Q6PII3 467 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 DLK2Q6UY11 383 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 ARMC9Q7Z3E5 817 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 SCUBE1Q8IWY4 988 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 PDILTQ8N807 584 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 C12orf50Q8NA57 414 aaPredicted RBP6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 SPATA5Q8NB90 893 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 FAM151AQ8WW52 585 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 TP53INP1Q96A56 240 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 NSUN4Q96CB9 384 aaKnown RBP6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 EAF2Q96CJ1 260 aaPredicted RBP6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 KIF1BPQ96EK5 621 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 FAM46AQ96IP4 442 aaKnown RBP6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 CLUHP3Q96NS8 147 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 UBL7Q96S82 380 aaPredicted RBP6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 TTC1Q99614 292 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 RHOBTB2Q9BYZ6 727 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 TDRD3Q9H7E2 651 aaKnown RBP6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 ZCCHC17Q9NP64 241 aaKnown RBP6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 RAD18Q9NS91 495 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 ZNF112Q9UJU3 913 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 LAMA4Q16363 1823 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 MROH7-TTC4A0A0A0MT08 1334 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 MYH4Q9Y623 1939 aa6.91□□□□□ -1.3
TMEM39A-212ENST00000497993 PRPF3O43395 683 aaKnown RBP6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 AOC2O75106 756 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 FRAT2O75474 233 aaPredicted RBP6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 USP2O75604 605 aaPredicted RBP6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 SURF6O75683 361 aaKnown RBP6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 TIAF1O95411 115 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 SLFN14P0C7P3 912 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 SDSP20132 328 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 CASP2P42575 452 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 NEK3P51956 506 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 NEK4P51957 841 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 RRP1P56182 461 aaKnown RBP6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 INHBEP58166 350 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 SUMO1P63165 101 aaKnown RBP6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 SOX4Q06945 474 aaPredicted RBP6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 CHAF1AQ13111 956 aaPredicted RBP6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 HSP90AA2PQ14568 343 aaPredicted RBP6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 FAM209AQ5JX71 171 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 NBPF12Q5TAG4 269 aaPredicted RBP6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 CDC42EP5Q6NZY7 148 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 LLGL2Q6P1M3 1020 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 CNTD1Q8N815 330 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 ANKRD42Q8N9B4 389 aa6.9□□□□□ -1.3
TMEM39A-212ENST00000497993 STK35Q8TDR2 534 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms