RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TXLNBQ8N3L3 684 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 RUFY1Q96T51 708 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 SRRTQ9BXP5 876 aaKnown RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 TRIM55Q9BYV6 548 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 RABEP2Q9H5N1 569 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 SYNCQ9H7C4 482 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 NRDE2Q9H7Z3 1164 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 ZNF408Q9H9D4 720 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 GRPEL1Q9HAV7 217 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 NGRNQ9NPE2 291 aaKnown RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 SNTG2Q9NY99 539 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 ADAM30Q9UKF2 790 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 ITGB1BP2Q9UKP3 347 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 NOB1Q9ULX3 412 aaKnown RBP3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 CNPY2Q9Y2B0 182 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 SPO11Q9Y5K1 396 aa3.46□□□□□ -1.86
SNRNP48-202ENST00000496946 TMEM265A0A087WTH1 108 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 SGSM2O43147 1006 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 OPA1O60313 960 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 NEMFO60524 1076 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 SNX2O60749 519 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 ARIH2O95376 493 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 STAMBPO95630 424 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 AGR2O95994 175 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 GLULP15104 373 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 ATF4P18848 351 aaPredicted RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 TNFAIP3P21580 790 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 CAP2P40123 477 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 ZNF165P49910 485 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 CCNHP51946 323 aaPredicted RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 ARPC4P59998 168 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 AP2B1P63010 937 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 TUBA1BP68363 451 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 DMPKQ09013 629 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 GRM1Q13255 1194 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 SF1Q15637 639 aaKnown RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 DPY19L1Q2PZI1 675 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 DALRD3Q5D0E6 543 aaKnown RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 ANGEL2Q5VTE6 544 aaKnown RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 CDCP2Q5VXM1 449 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 MCTP1Q6DN14 999 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 GALNT17Q6IS24 598 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 NAA16Q6N069 864 aaPredicted RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 CFAP161Q6P656 301 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 TUBA1AQ71U36 451 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 CBLL1Q75N03 491 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 BTN2A1Q7KYR7 527 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 CATSPER4Q7RTX7 472 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 CCDC84Q86UT8 332 aaPredicted RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 ERC1Q8IUD2 1116 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 OR8H2Q8N162 312 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 VPS52Q8N1B4 723 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 MSANTD4Q8NCY6 345 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 C3orf20Q8ND61 904 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 PI4K2BQ8TCG2 481 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 ASB11Q8WXH4 323 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 PPP1R14AQ96A00 147 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 EXOC4Q96A65 974 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 ZDHHC15Q96MV8 337 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 PPP1R9BQ96SB3 815 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 SMAD5Q99717 465 aaKnown RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 MCMBPQ9BTE3 642 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 HDAC8Q9BY41 377 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 CFDP1Q9UEE9 299 aaPredicted RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 TCFL5Q9UL49 500 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 TRIM17Q9Y577 477 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 MAGED1Q9Y5V3 778 aaPredicted RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 KPNA6O60684 536 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 ATE1O95260 518 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 RAC2P15153 192 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 FERP16591 822 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 MXI1P50539 228 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 CLCN2P51788 898 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 TPD52P55327 224 aaPredicted RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 STK3Q13188 491 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 TNIP1Q15025 636 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 TKFCQ3LXA3 575 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 SMUG1Q53HV7 270 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 CAPRIN2Q6IMN6 1127 aaKnown RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 MRM1Q6IN84 353 aaKnown RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 PPP4R3AQ6IN85 833 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 TMEM151BQ8IW70 566 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 RNF168Q8IYW5 571 aaPredicted RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 AFAP1Q8N556 730 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 LINC00469Q8N7U9 141 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 FAM81AQ8TBF8 368 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 CFAP36Q96G28 342 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 TCTN2Q96GX1 697 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 CLMNQ96JQ2 1002 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 DEPDC7Q96QD5 511 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 ALPK1Q96QP1 1244 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 SYT3Q9BQG1 590 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 EIF2AK1Q9BQI3 630 aaKnown RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 BRD8Q9H0E9 1235 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 LUC7LQ9NQ29 371 aaKnown RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 PIH1D1Q9NWS0 290 aaKnown RBP3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 STK39Q9UEW8 545 aa3.45□□□□□ -1.86
SNRNP48-202ENST00000496946 FBXL21Q9UKT6 434 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms