RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 LMAN2LQ9H0V9 348 aa13.91□□□□□ -0.18
CLDN12-213ENST00000496677 ELAC1Q9H777 363 aaKnown RBP13.91□□□□□ -0.18
CLDN12-213ENST00000496677 PLAGL2Q9UPG8 496 aa13.91□□□□□ -0.18
CLDN12-213ENST00000496677 LIMCH1Q9UPQ0 1083 aa13.91□□□□□ -0.18
CLDN12-213ENST00000496677 AKT3Q9Y243 479 aa13.91□□□□□ -0.18
CLDN12-213ENST00000496677 PCDHB7Q9Y5E2 793 aa13.91□□□□□ -0.18
CLDN12-213ENST00000496677 TCF20Q9UGU0 1960 aaKnown RBP13.91□□□□□ -0.18
CLDN12-213ENST00000496677 WNT7AO00755 349 aa13.9□□□□□ -0.18
CLDN12-213ENST00000496677 MAFO75444 373 aaPredicted RBP13.9□□□□□ -0.18
CLDN12-213ENST00000496677 P4HBP07237 508 aaKnown RBP13.9□□□□□ -0.18
CLDN12-213ENST00000496677 DNAJB1P25685 340 aa13.9□□□□□ -0.18
CLDN12-213ENST00000496677 QARSP47897 775 aaKnown RBP13.9□□□□□ -0.18
CLDN12-213ENST00000496677 EPHA7Q15375 998 aa13.9□□□□□ -0.18
CLDN12-213ENST00000496677 MTERF2Q49AM1 385 aa13.9□□□□□ -0.18
CLDN12-213ENST00000496677 TIGD5Q53EQ6 642 aa13.9□□□□□ -0.18
CLDN12-213ENST00000496677 NAALADL2Q58DX5 795 aa13.9□□□□□ -0.18
CLDN12-213ENST00000496677 TCEAL5Q5H9L2 206 aa13.9□□□□□ -0.18
CLDN12-213ENST00000496677 FAM102BQ5T8I3 360 aa13.9□□□□□ -0.18
CLDN12-213ENST00000496677 SPPL3Q8TCT6 385 aa13.9□□□□□ -0.18
CLDN12-213ENST00000496677 P2RX5Q93086 422 aa13.9□□□□□ -0.18
CLDN12-213ENST00000496677 ZNF668Q96K58 619 aaPredicted RBP13.9□□□□□ -0.18
CLDN12-213ENST00000496677 UHRF1Q96T88 793 aaPredicted RBP13.9□□□□□ -0.18
CLDN12-213ENST00000496677 UBE2ZQ9H832 354 aaPredicted RBP13.9□□□□□ -0.18
CLDN12-213ENST00000496677 RNF19AQ9NV58 838 aa13.9□□□□□ -0.18
CLDN12-213ENST00000496677 TMEM161AQ9NX61 479 aa13.9□□□□□ -0.18
CLDN12-213ENST00000496677 SEPT9Q9UHD8 586 aaPredicted RBP13.9□□□□□ -0.18
CLDN12-213ENST00000496677 DENND3A2RUS2 1198 aa13.89□□□□□ -0.19
CLDN12-213ENST00000496677 NPEPPSP55786 919 aa13.89□□□□□ -0.19
CLDN12-213ENST00000496677 LEXMQ3ZCV2 418 aa13.89□□□□□ -0.19
CLDN12-213ENST00000496677 PAN2Q504Q3 1202 aaKnown RBP13.89□□□□□ -0.19
CLDN12-213ENST00000496677 C4orf19Q8IY42 314 aa13.89□□□□□ -0.19
CLDN12-213ENST00000496677 DIS3L2Q8IYB7 885 aaKnown RBP13.89□□□□□ -0.19
CLDN12-213ENST00000496677 NEK9Q8TD19 979 aa13.89□□□□□ -0.19
CLDN12-213ENST00000496677 NSUN3Q9H649 340 aaKnown RBP13.89□□□□□ -0.19
CLDN12-213ENST00000496677 DHX33Q9H6R0 707 aaKnown RBP13.89□□□□□ -0.19
CLDN12-213ENST00000496677 LRFN2Q9ULH4 789 aa13.89□□□□□ -0.19
CLDN12-213ENST00000496677 ATG2AQ2TAZ0 1938 aa13.89□□□□□ -0.19
CLDN12-213ENST00000496677 FNDC1Q4ZHG4 1894 aaPredicted RBP13.89□□□□□ -0.19
CLDN12-213ENST00000496677 KIAA1671Q9BY89 1806 aa13.88□□□□□ -0.19
CLDN12-213ENST00000496677 SLITRK3O94933 977 aa13.88□□□□□ -0.19
CLDN12-213ENST00000496677 ITGB1P05556 798 aa13.88□□□□□ -0.19
CLDN12-213ENST00000496677 CDC42EP1Q00587 391 aa13.88□□□□□ -0.19
CLDN12-213ENST00000496677 CTC1Q2NKJ3 1217 aa13.88□□□□□ -0.19
CLDN12-213ENST00000496677 PLA2G4FQ68DD2 849 aa13.88□□□□□ -0.19
CLDN12-213ENST00000496677 ZNF598Q86UK7 904 aaKnown RBP13.88□□□□□ -0.19
CLDN12-213ENST00000496677 SLFN12Q8IYM2 578 aa13.88□□□□□ -0.19
CLDN12-213ENST00000496677 KLHL23Q8NBE8 558 aa13.88□□□□□ -0.19
CLDN12-213ENST00000496677 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.88□□□□□ -0.19
CLDN12-213ENST00000496677 MTMR9Q96QG7 549 aa13.88□□□□□ -0.19
CLDN12-213ENST00000496677 HSD17B14Q9BPX1 270 aa13.88□□□□□ -0.19
CLDN12-213ENST00000496677 LLPHQ9BRT6 129 aaKnown RBP13.88□□□□□ -0.19
CLDN12-213ENST00000496677 CWH43Q9H720 699 aa13.88□□□□□ -0.19
CLDN12-213ENST00000496677 ALG13Q9NP73 1137 aaKnown RBP13.88□□□□□ -0.19
CLDN12-213ENST00000496677 CYP26B1Q9NR63 512 aa13.88□□□□□ -0.19
CLDN12-213ENST00000496677 RGL1Q9NZL6 768 aa13.88□□□□□ -0.19
CLDN12-213ENST00000496677 SUCLA2Q9P2R7 463 aaPredicted RBP13.88□□□□□ -0.19
CLDN12-213ENST00000496677 A0A087WZ62 844 aa13.87□□□□□ -0.19
CLDN12-213ENST00000496677 ZBTB39O15060 712 aa13.87□□□□□ -0.19
CLDN12-213ENST00000496677 CSDE1O75534 798 aaKnown RBP13.87□□□□□ -0.19
CLDN12-213ENST00000496677 FGFR1P11362 822 aa13.87□□□□□ -0.19
CLDN12-213ENST00000496677 FGFR4P22455 802 aa13.87□□□□□ -0.19
CLDN12-213ENST00000496677 LTBRP36941 435 aa13.87□□□□□ -0.19
CLDN12-213ENST00000496677 RBM25P49756 843 aaKnown RBP13.87□□□□□ -0.19
CLDN12-213ENST00000496677 DNM2P50570 870 aa13.87□□□□□ -0.19
CLDN12-213ENST00000496677 LRRC55Q6ZSA7 311 aa13.87□□□□□ -0.19
CLDN12-213ENST00000496677 ECHDC2Q86YB7 292 aa13.87□□□□□ -0.19
CLDN12-213ENST00000496677 CCDC83Q8IWF9 413 aa13.87□□□□□ -0.19
CLDN12-213ENST00000496677 PABPC5Q96DU9 382 aaKnown RBP13.87□□□□□ -0.19
CLDN12-213ENST00000496677 DYDC2Q96IM9 177 aa13.87□□□□□ -0.19
CLDN12-213ENST00000496677 CASD1Q96PB1 797 aa13.87□□□□□ -0.19
CLDN12-213ENST00000496677 FDXACB1Q9BRP7 624 aaPredicted RBP13.87□□□□□ -0.19
CLDN12-213ENST00000496677 LXNQ9BS40 222 aa13.87□□□□□ -0.19
CLDN12-213ENST00000496677 ATP6V0A4Q9HBG4 840 aa13.87□□□□□ -0.19
CLDN12-213ENST00000496677 BRMS1Q9HCU9 246 aa13.87□□□□□ -0.19
CLDN12-213ENST00000496677 TYW1Q9NV66 732 aaKnown RBP13.87□□□□□ -0.19
CLDN12-213ENST00000496677 PPME1Q9Y570 386 aa13.87□□□□□ -0.19
CLDN12-213ENST00000496677 A0A0U1RQF3 1178 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 TBKBP1A7MCY6 615 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 DKC1O60832 514 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLDN12-213ENST00000496677 LYPLA2O95372 231 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 BAG4O95429 457 aaKnown RBP13.86□□□□□ -0.19
CLDN12-213ENST00000496677 ATF7P17544 494 aaPredicted RBP13.86□□□□□ -0.19
CLDN12-213ENST00000496677 KCNA5P22460 613 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 FOSBP53539 338 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 HYAL1Q12794 435 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 NCAPH2Q6IBW4 605 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 ZNF410Q86VK4 478 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 KSR1Q8IVT5 923 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 IL27Q8NEV9 243 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 NLRP7Q8WX94 980 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 ZSCAN31Q96LW9 406 aaPredicted RBP13.86□□□□□ -0.19
CLDN12-213ENST00000496677 TRAIPQ9BWF2 469 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 GCOM2Q9BZD3 368 aaPredicted RBP13.86□□□□□ -0.19
CLDN12-213ENST00000496677 TMEM117Q9H0C3 514 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 ZSWIM4Q9H7M6 989 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 IFT122Q9HBG6 1241 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 CHST12Q9NRB3 414 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 HCSTQ9UBK5 93 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 PCDHA12Q9UN75 941 aa13.86□□□□□ -0.19
CLDN12-213ENST00000496677 GRXCR2A6NFK2 248 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms