RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 TRPC7Q9HCX4 862 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 OLFML3Q9NRN5 406 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 BCAP29Q9UHQ4 241 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 F8W031 263 aaPredicted RBP8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 THAP12O43422 761 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 PEX11AO75192 247 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 PSMG1O95456 288 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 RPL5P46777 297 aaKnown RBP8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 SPIDRQ14159 915 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 CYTH1Q15438 398 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 BTNL9Q6UXG8 535 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 SYMPKQ92797 1274 aaKnown RBP8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 CDK19Q9BWU1 502 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 AMOTL2Q9Y2J4 779 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 TACC3Q9Y6A5 838 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 DUOX2Q9NRD8 1548 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 CFAP69A5D8W1 941 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 A8MXQ7 604 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 BTBD18B2RXH4 712 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 KIF28PB7ZC32 967 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 TSPAN9O75954 239 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 GNA14O95837 355 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 IL13P35225 146 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 CCR3P51677 355 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 IGBP1P78318 339 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 SPDYCQ5MJ68 293 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 PCNX4Q63HM2 1172 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 TMC3Q7Z5M5 1100 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 TDRKHQ9Y2W6 561 aaKnown RBP8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 INO80Q9ULG1 1556 aaPredicted RBP8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 WDR17Q8IZU2 1322 aa8.76□□□□□ -1.01
CRNKL1-205ENST00000496549 GOLGA8CPA6NN73 597 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 GNAT3A8MTJ3 354 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 ATP6V1B1P15313 513 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 FBLN1P23142 703 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 TUFMP49411 452 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 NAA20P61599 178 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 KCNMA1Q12791 1236 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 LPIN1Q14693 890 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 TRIM16LQ309B1 348 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 OR52E8Q6IFG1 317 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 KBTBD3Q8NAB2 608 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 TTC8Q8TAM2 541 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 EAF2Q96CJ1 260 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 AGBL1Q96MI9 1066 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 PUS3Q9BZE2 481 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 ROPN1BQ9BZX4 212 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 ROPN1Q9HAT0 212 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 GJB4Q9NTQ9 266 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 NKX1-2Q9UD57 310 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 ASIC3Q9UHC3 531 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 STX8Q9UNK0 236 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 CNOT3O75175 753 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 STIP1P31948 543 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 BTKQ06187 659 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 RGS9BPQ6ZS82 235 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 KRT27Q7Z3Y8 459 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 C11orf74Q86VG3 221 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 FOXP4Q8IVH2 680 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 PDZD8Q8NEN9 1154 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 COX4I2Q96KJ9 171 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 KLHL25Q9H0H3 589 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 AGPAT5Q9NUQ2 364 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 PAG1Q9NWQ8 432 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 SEL1LQ9UBV2 794 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 HDAC9Q9UKV0 1011 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 NOC2LQ9Y3T9 749 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 IKBKGQ9Y6K9 419 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 LMTK3Q96Q04 1460 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 CCDC162PA2VCL2 907 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 FAM187AA6NFU0 413 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 ATP2A1O14983 1001 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 DEXIO95424 95 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 CDH3P22223 829 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 ERVK-9P63128 1117 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 SYDE2Q5VT97 1194 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 UNC13DQ70J99 1090 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 DHTKD1Q96HY7 919 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 COQ7Q99807 217 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 STK33Q9BYT3 514 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 GPHNQ9NQX3 736 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 ARMCX3Q9UH62 379 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 SNX24Q9Y343 169 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 ATP6V0A2Q9Y487 856 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 TNRQ92752 1358 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 CDK12Q9NYV4 1490 aaPredicted RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 MAP3K15Q6ZN16 1313 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 VDRP11473 427 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 FECHP22830 423 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 PBX1P40424 430 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 MMP13P45452 471 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 MRPS9P82933 396 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 PDE4DQ08499 809 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 PDAP1Q13442 181 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 TRPC3Q13507 836 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 PTPROQ16827 1216 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 PABPC1LQ4VXU2 614 aaKnown RBP8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 SH3D19Q5HYK7 790 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 USPL1Q5W0Q7 1092 aa8.75□□□□□ -1.01
CRNKL1-205ENST00000496549 RBM44Q6ZP01 1051 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms