RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ANO5Q75V66 913 aa17.63■□□□□ 0.41
HDAC4-213ENST00000496347 CCDC83Q8IWF9 413 aa17.63■□□□□ 0.41
HDAC4-213ENST00000496347 HLA-CQ95604 372 aa17.63■□□□□ 0.41
HDAC4-213ENST00000496347 LMAN2LQ9H0V9 348 aa17.63■□□□□ 0.41
HDAC4-213ENST00000496347 PCDHB7Q9Y5E2 793 aa17.63■□□□□ 0.41
HDAC4-213ENST00000496347 MRPL42Q9Y6G3 142 aaKnown RBP17.63■□□□□ 0.41
HDAC4-213ENST00000496347 TMEM150BA6NC51 233 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 MAFO75444 373 aaPredicted RBP17.62■□□□□ 0.41
HDAC4-213ENST00000496347 TFF2Q03403 129 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 DSC3Q14574 896 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 EPHA7Q15375 998 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 CALCRLQ16602 461 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 ZNF410Q86VK4 478 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 C4orf19Q8IY42 314 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 EXOC8Q8IYI6 725 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 NEK9Q8TD19 979 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 ADAMTS19Q8TE59 1207 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 NLRP7Q8WX94 980 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 SLC7A3Q8WY07 619 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 P2RX5Q93086 422 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 C8orf76Q96K31 380 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 ELAC1Q9H777 363 aaKnown RBP17.62■□□□□ 0.41
HDAC4-213ENST00000496347 CYP26B1Q9NR63 512 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 TMEM161AQ9NX61 479 aa17.62■□□□□ 0.41
HDAC4-213ENST00000496347 DDX11L8A8MPP1 907 aa17.61■□□□□ 0.41
HDAC4-213ENST00000496347 HOXA2O43364 376 aa17.61■□□□□ 0.41
HDAC4-213ENST00000496347 GAS2O43903 313 aaKnown RBP17.61■□□□□ 0.41
HDAC4-213ENST00000496347 RFC5P40937 340 aa17.61■□□□□ 0.41
HDAC4-213ENST00000496347 FOSBP53539 338 aa17.61■□□□□ 0.41
HDAC4-213ENST00000496347 ORC2Q13416 577 aaPredicted RBP17.61■□□□□ 0.41
HDAC4-213ENST00000496347 DRP2Q13474 957 aa17.61■□□□□ 0.41
HDAC4-213ENST00000496347 RABEP1Q15276 862 aa17.61■□□□□ 0.41
HDAC4-213ENST00000496347 NAALADL2Q58DX5 795 aa17.61■□□□□ 0.41
HDAC4-213ENST00000496347 PLA2G4FQ68DD2 849 aa17.61■□□□□ 0.41
HDAC4-213ENST00000496347 NCAPH2Q6IBW4 605 aa17.61■□□□□ 0.41
HDAC4-213ENST00000496347 NSUN3Q9H649 340 aaKnown RBP17.61■□□□□ 0.41
HDAC4-213ENST00000496347 ZSWIM4Q9H7M6 989 aa17.61■□□□□ 0.41
HDAC4-213ENST00000496347 TCF20Q9UGU0 1960 aaKnown RBP17.6■□□□□ 0.41
HDAC4-213ENST00000496347 SFPQP23246 707 aaKnown RBP eCLIP17.6■□□□□ 0.41
HDAC4-213ENST00000496347 YWHABP31946 246 aaKnown RBP17.6■□□□□ 0.41
HDAC4-213ENST00000496347 PAN2Q504Q3 1202 aaKnown RBP17.6■□□□□ 0.41
HDAC4-213ENST00000496347 GCOM2Q9BZD3 368 aaPredicted RBP17.6■□□□□ 0.41
HDAC4-213ENST00000496347 FOXP1Q9H334 677 aaPredicted RBP17.6■□□□□ 0.41
HDAC4-213ENST00000496347 UPF2Q9HAU5 1272 aaKnown RBP17.6■□□□□ 0.41
HDAC4-213ENST00000496347 DACT1Q9NYF0 836 aa17.6■□□□□ 0.41
HDAC4-213ENST00000496347 WRAP73Q9P2S5 460 aaPredicted RBP17.6■□□□□ 0.41
HDAC4-213ENST00000496347 PLXNA4Q9HCM2 1894 aa17.6■□□□□ 0.41
HDAC4-213ENST00000496347 ZSCAN20P17040 1043 aaPredicted RBP17.59■□□□□ 0.41
HDAC4-213ENST00000496347 POLGP54098 1239 aaPredicted RBP17.59■□□□□ 0.41
HDAC4-213ENST00000496347 FAM189BP81408 668 aa17.59■□□□□ 0.41
HDAC4-213ENST00000496347 COL19A1Q14993 1142 aa17.59■□□□□ 0.41
HDAC4-213ENST00000496347 OTUD6AQ7L8S5 288 aa17.59■□□□□ 0.41
HDAC4-213ENST00000496347 RSPH1Q8WYR4 309 aa17.59■□□□□ 0.41
HDAC4-213ENST00000496347 CEP170P1Q96L14 293 aa17.59■□□□□ 0.41
HDAC4-213ENST00000496347 UHRF1Q96T88 793 aaPredicted RBP17.59■□□□□ 0.41
HDAC4-213ENST00000496347 SH2D3AQ9BRG2 576 aa17.59■□□□□ 0.41
HDAC4-213ENST00000496347 DHX33Q9H6R0 707 aaKnown RBP17.59■□□□□ 0.41
HDAC4-213ENST00000496347 UBE2ZQ9H832 354 aaPredicted RBP17.59■□□□□ 0.41
HDAC4-213ENST00000496347 ATP6V0A4Q9HBG4 840 aa17.59■□□□□ 0.41
HDAC4-213ENST00000496347 SUCLA2Q9P2R7 463 aaPredicted RBP17.59■□□□□ 0.41
HDAC4-213ENST00000496347 PCDHA12Q9UN75 941 aa17.59■□□□□ 0.41
HDAC4-213ENST00000496347 ST18O60284 1047 aa17.58■□□□□ 0.4
HDAC4-213ENST00000496347 LYPLA2O95372 231 aa17.58■□□□□ 0.4
HDAC4-213ENST00000496347 BMP1P13497 986 aa17.58■□□□□ 0.4
HDAC4-213ENST00000496347 GATMP50440 423 aa17.58■□□□□ 0.4
HDAC4-213ENST00000496347 KCNQ1P51787 676 aa17.58■□□□□ 0.4
HDAC4-213ENST00000496347 CYP4A11Q02928 519 aa17.58■□□□□ 0.4
HDAC4-213ENST00000496347 EMC2Q15006 297 aa17.58■□□□□ 0.4
HDAC4-213ENST00000496347 CSPP1Q1MSJ5 1256 aa17.58■□□□□ 0.4
HDAC4-213ENST00000496347 RHPN2Q8IUC4 686 aa17.58■□□□□ 0.4
HDAC4-213ENST00000496347 LRRC43Q8N309 656 aa17.58■□□□□ 0.4
HDAC4-213ENST00000496347 FAM184AQ8NB25 1140 aa17.58■□□□□ 0.4
HDAC4-213ENST00000496347 FBXO18Q8NFZ0 1043 aa17.58■□□□□ 0.4
HDAC4-213ENST00000496347 PSPC1Q8WXF1 523 aaKnown RBP17.58■□□□□ 0.4
HDAC4-213ENST00000496347 MTMR9Q96QG7 549 aa17.58■□□□□ 0.4
HDAC4-213ENST00000496347 INO80BQ9C086 356 aaPredicted RBP17.58■□□□□ 0.4
HDAC4-213ENST00000496347 TTC12Q9H892 705 aaPredicted RBP17.58■□□□□ 0.4
HDAC4-213ENST00000496347 AAASQ9NRG9 546 aa17.58■□□□□ 0.4
HDAC4-213ENST00000496347 COL4A3BPQ9Y5P4 624 aa17.58■□□□□ 0.4
HDAC4-213ENST00000496347 TBKBP1A7MCY6 615 aa17.57■□□□□ 0.4
HDAC4-213ENST00000496347 WNT7AO00755 349 aa17.57■□□□□ 0.4
HDAC4-213ENST00000496347 GRM6O15303 877 aa17.57■□□□□ 0.4
HDAC4-213ENST00000496347 NCK2O43639 380 aa17.57■□□□□ 0.4
HDAC4-213ENST00000496347 IBSPP21815 317 aaPredicted RBP17.57■□□□□ 0.4
HDAC4-213ENST00000496347 NPEPPSP55786 919 aa17.57■□□□□ 0.4
HDAC4-213ENST00000496347 DYDC2Q96IM9 177 aa17.57■□□□□ 0.4
HDAC4-213ENST00000496347 ZNF668Q96K58 619 aaPredicted RBP17.57■□□□□ 0.4
HDAC4-213ENST00000496347 NLRP4Q96MN2 994 aa17.57■□□□□ 0.4
HDAC4-213ENST00000496347 EIF2AK1Q9BQI3 630 aaKnown RBP17.57■□□□□ 0.4
HDAC4-213ENST00000496347 TRAIPQ9BWF2 469 aa17.57■□□□□ 0.4
HDAC4-213ENST00000496347 TMEM117Q9H0C3 514 aa17.57■□□□□ 0.4
HDAC4-213ENST00000496347 CHST12Q9NRB3 414 aa17.57■□□□□ 0.4
HDAC4-213ENST00000496347 RGL1Q9NZL6 768 aa17.57■□□□□ 0.4
HDAC4-213ENST00000496347 PLAGL2Q9UPG8 496 aa17.57■□□□□ 0.4
HDAC4-213ENST00000496347 A0A087WZ62 844 aa17.56■□□□□ 0.4
HDAC4-213ENST00000496347 A0A0U1RQF3 1178 aa17.56■□□□□ 0.4
HDAC4-213ENST00000496347 TNFRSF10AO00220 468 aa17.56■□□□□ 0.4
HDAC4-213ENST00000496347 FGFR1P11362 822 aa17.56■□□□□ 0.4
HDAC4-213ENST00000496347 LAG3P18627 525 aa17.56■□□□□ 0.4
HDAC4-213ENST00000496347 TRAPPC10P48553 1259 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms