RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 CLIC6Q96NY7 704 aa7.07□□□□□ -1.28
SSR3-208ENST00000496050 SLC2A13Q96QE2 648 aa7.07□□□□□ -1.28
SSR3-208ENST00000496050 EPB41L4BQ9H329 900 aa7.07□□□□□ -1.28
SSR3-208ENST00000496050 MTG2Q9H4K7 406 aa7.07□□□□□ -1.28
SSR3-208ENST00000496050 IFT122Q9HBG6 1241 aa7.07□□□□□ -1.28
SSR3-208ENST00000496050 PRSS50Q9UI38 385 aa7.07□□□□□ -1.28
SSR3-208ENST00000496050 ZBTB21Q9ULJ3 1066 aa7.07□□□□□ -1.28
SSR3-208ENST00000496050 WASF3Q9UPY6 502 aa7.07□□□□□ -1.28
SSR3-208ENST00000496050 PCDHA5Q9Y5H7 936 aa7.07□□□□□ -1.28
SSR3-208ENST00000496050 A0A0A6YYJ9 748 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 TEX51A0A1B0GUA7 166 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 NDUFS2O75306 463 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 CYP7B1O75881 506 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 PAPLNO95428 1278 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 HSPA6P17066 643 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 ITGB5P18084 799 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 XPAP23025 273 aaPredicted RBP7.06□□□□□ -1.28
SSR3-208ENST00000496050 NCKAP1LP55160 1127 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 MAP3K12Q12852 859 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 RRP12Q5JTH9 1297 aaKnown RBP7.06□□□□□ -1.28
SSR3-208ENST00000496050 MBNL2Q5VZF2 373 aaKnown RBP7.06□□□□□ -1.28
SSR3-208ENST00000496050 PPM1NQ8N819 430 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 CDYL2Q8N8U2 506 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 SMARCC2Q8TAQ2 1214 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 MZB1Q8WU39 189 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 GAB3Q8WWW8 586 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 WRNIP1Q96S55 665 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 DIRC2Q96SL1 478 aa7.06□□□□□ -1.28
SSR3-208ENST00000496050 NOL10Q9BSC4 688 aaKnown RBP7.06□□□□□ -1.28
SSR3-208ENST00000496050 NSUN3Q9H649 340 aaKnown RBP7.06□□□□□ -1.28
SSR3-208ENST00000496050 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.05□□□□□ -1.28
SSR3-208ENST00000496050 CUTAO60888 179 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 ZRANB2O95218 330 aaKnown RBP eCLIP7.05□□□□□ -1.28
SSR3-208ENST00000496050 MAP4K4O95819 1239 aaPredicted RBP7.05□□□□□ -1.28
SSR3-208ENST00000496050 C5AR1P21730 350 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 SLC16A1P53985 500 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 FOXO4P98177 505 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 CDK17Q00537 523 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 TRIM25Q14258 630 aaKnown RBP7.05□□□□□ -1.28
SSR3-208ENST00000496050 STILQ15468 1287 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 CCDC178Q5BJE1 867 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 BMP8AQ7Z5Y6 402 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 LYSMD2Q8IV50 215 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 TTLL6Q8N841 843 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 HIST1H2AHQ96KK5 128 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 HIST1H2AJQ99878 128 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 TACO1Q9BSH4 297 aaKnown RBP7.05□□□□□ -1.28
SSR3-208ENST00000496050 PRDM11Q9NQV5 511 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 SLC52A1Q9NWF4 448 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 MBD1Q9UIS9 605 aaPredicted RBP7.05□□□□□ -1.28
SSR3-208ENST00000496050 ZFP69BQ9UJL9 534 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 PCDHB6Q9Y5E3 794 aa7.05□□□□□ -1.28
SSR3-208ENST00000496050 MYOCOSA0A1B0GUC4 107 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 ERC2O15083 957 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 NRP2O60462 931 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 OPHN1O60890 802 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 MAFO75444 373 aaPredicted RBP7.04□□□□□ -1.28
SSR3-208ENST00000496050 IL18BPO95998 194 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 LPOP22079 712 aaPredicted RBP7.04□□□□□ -1.28
SSR3-208ENST00000496050 THBS2P35442 1172 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 MC3RP41968 323 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 CDR1P51861 262 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 ITGA1P56199 1179 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 PPARAQ07869 468 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 DGKDQ16760 1214 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 ARHGAP29Q52LW3 1261 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 IFIT1BQ5T764 474 aaKnown RBP7.04□□□□□ -1.28
SSR3-208ENST00000496050 PRR23BQ6ZRT6 265 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 EPM2AIP1Q7L775 607 aaPredicted RBP7.04□□□□□ -1.28
SSR3-208ENST00000496050 SLC41A1Q8IVJ1 513 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 STPG3Q8N7X2 389 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 KYQ8NBH2 561 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 LRGUKQ96M69 825 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 C11orf84Q9BUA3 381 aaPredicted RBP7.04□□□□□ -1.28
SSR3-208ENST00000496050 ACE2Q9BYF1 805 aaPredicted RBP7.04□□□□□ -1.28
SSR3-208ENST00000496050 PITHD1Q9GZP4 211 aaPredicted RBP7.04□□□□□ -1.28
SSR3-208ENST00000496050 OBP2AQ9NY56 170 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 SAP30BPQ9UHR5 308 aaKnown RBP7.04□□□□□ -1.28
SSR3-208ENST00000496050 CDY2AQ9Y6F7 541 aa7.04□□□□□ -1.28
SSR3-208ENST00000496050 VSTM5A8MXK1 200 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 N4BP3O15049 544 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 SEMA7AO75326 666 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 OFD1O75665 1012 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 CHGBP05060 677 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 IRAK1P51617 712 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 NRG3P56975 720 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 IL13RA1P78552 427 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 CD83Q01151 205 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 KIF23Q02241 960 aaPredicted RBP7.03□□□□□ -1.28
SSR3-208ENST00000496050 WDR72Q3MJ13 1102 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 KANK2Q63ZY3 851 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 SLC4A10Q6U841 1118 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 STK32CQ86UX6 486 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 DGKHQ86XP1 1220 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 THEMISQ8N1K5 641 aaPredicted RBP7.03□□□□□ -1.28
SSR3-208ENST00000496050 SLC35G2Q8TBE7 412 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 KCNN1Q92952 543 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 PAWRQ96IZ0 340 aaKnown RBP7.03□□□□□ -1.28
SSR3-208ENST00000496050 SYT3Q9BQG1 590 aa7.03□□□□□ -1.28
SSR3-208ENST00000496050 GORASP1Q9BQQ3 440 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms