RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 TATDN2Q93075 761 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 FOXQ1Q9C009 403 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 FAM49AQ9H0Q0 323 aaPredicted RBP11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 CWH43Q9H720 699 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 TOMM22Q9NS69 142 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 C1orf112Q9NSG2 853 aa11.12□□□□□ -0.63
SMARCAL1-213ENST00000496037 IGSF9BQ9UPX0 1349 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 DHX16O60231 1041 aaKnown RBP11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 CENPBP07199 599 aaPredicted RBP11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 GLULP15104 373 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 EPCAMP16422 314 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 SP4Q02446 784 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 CTDSPL2Q05D32 466 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 PGM5Q15124 567 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 LETM2Q2VYF4 491 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 DCLRE1AQ6PJP8 1040 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 CYFIP1Q7L576 1253 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 GPR149Q86SP6 731 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 VSIG10LQ86VR7 867 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 LRRC43Q8N309 656 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 TTC13Q8NBP0 860 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 ZBTB44Q8NCP5 570 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 RSAD2Q8WXG1 361 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 CALR3Q96L12 384 aaKnown RBP11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 ATP6V0A4Q9HBG4 840 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 SPG21Q9NZD8 308 aa11.11□□□□□ -0.63
SMARCAL1-213ENST00000496037 CEP295Q9C0D2 2601 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 MBLAC1A4D2B0 266 aaPredicted RBP11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 GOLGA8HP0CJ92 632 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 GBP2P32456 591 aaPredicted RBP11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 PBX3P40426 434 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 HSD17B4P51659 736 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 IGBP1P78318 339 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 TMEM62Q0P6H9 643 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 PTPN14Q15678 1187 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 TMEM266Q2M3C6 531 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 RRP12Q5JTH9 1297 aaKnown RBP11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 IL31Q6EBC2 164 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 UNQ6494/PRO21346Q6UXR6 183 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 FAM43BQ6ZT52 329 aaPredicted RBP11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 SLC24A5Q71RS6 500 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 ABI1Q8IZP0 508 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 IL31RAQ8NI17 732 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 STAMQ92783 540 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 NXPE3Q969Y0 559 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 SHDQ96IW2 340 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 UBA5Q9GZZ9 404 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 CPVLQ9H3G5 476 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 TMX1Q9H3N1 280 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 BCAS3Q9H6U6 928 aa11.1□□□□□ -0.63
SMARCAL1-213ENST00000496037 FNDC1Q4ZHG4 1894 aaPredicted RBP11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 SMAPO00193 183 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 HOXA2O43364 376 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 LILRB5O75023 590 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 LRP3O75074 770 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 RAB11FIP3O75154 756 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 HMMRO75330 724 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 CXCL14O95715 111 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 SNHG28P0DPA3 235 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 FGFR1P11362 822 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 MARK3P27448 753 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 GIT2Q14161 759 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 N4BP2L1Q5TBK1 243 aaPredicted RBP11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 STOX1Q6ZVD7 989 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 NUDT18Q6ZVK8 323 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 PPFIBP1Q86W92 1011 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 SLC44A3Q8N4M1 653 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 ADAM2Q99965 735 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 TMEM117Q9H0C3 514 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 IGSF5Q9NSI5 407 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 TMEM161AQ9NX61 479 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 ERAP1Q9NZ08 941 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 PCDHA1Q9Y5I3 950 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 WDFY3Q8IZQ1 3526 aa11.09□□□□□ -0.63
SMARCAL1-213ENST00000496037 GCN1Q92616 2671 aaKnown RBP11.08□□□□□ -0.64
SMARCAL1-213ENST00000496037 ORC4O43929 436 aa11.08□□□□□ -0.64
SMARCAL1-213ENST00000496037 LRRN2O75325 713 aa11.08□□□□□ -0.64
SMARCAL1-213ENST00000496037 MS4A1P11836 297 aa11.08□□□□□ -0.64
SMARCAL1-213ENST00000496037 QRICH1Q2TAL8 776 aa11.08□□□□□ -0.64
SMARCAL1-213ENST00000496037 ODR4Q5SWX8 454 aa11.08□□□□□ -0.64
SMARCAL1-213ENST00000496037 LAIR1Q6GTX8 287 aa11.08□□□□□ -0.64
SMARCAL1-213ENST00000496037 C15orf39Q6ZRI6 1047 aa11.08□□□□□ -0.64
SMARCAL1-213ENST00000496037 PRR23CQ6ZRP0 262 aa11.08□□□□□ -0.64
SMARCAL1-213ENST00000496037 TMEM169Q96HH4 297 aa11.08□□□□□ -0.64
SMARCAL1-213ENST00000496037 CELF4Q9BZC1 486 aaKnown RBP11.08□□□□□ -0.64
SMARCAL1-213ENST00000496037 RGS18Q9NS28 235 aa11.08□□□□□ -0.64
SMARCAL1-213ENST00000496037 MAP3K20Q9NYL2 800 aaKnown RBP11.08□□□□□ -0.64
SMARCAL1-213ENST00000496037 ASH1LQ9NR48 2969 aaKnown RBP11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 C1QTNF9BB2RNN3 333 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 FIBPO43427 364 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 MGEA5O60502 916 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 FOXD2O60548 495 aaPredicted RBP11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 RPS6KA5O75582 802 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 STAM2O75886 525 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 C1QTNF9P0C862 333 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 HOXA13P31271 388 aaPredicted RBP11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 TCF7P36402 384 aaPredicted RBP11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 MAGEA9P43362 315 aa11.07□□□□□ -0.64
SMARCAL1-213ENST00000496037 STARD6P59095 220 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms