RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 CTCFP49711 727 aaPredicted RBP17.34■□□□□ 0.37
PHF1-211ENST00000495509 PEX3P56589 373 aa17.34■□□□□ 0.37
PHF1-211ENST00000495509 PPFIA1Q13136 1202 aa17.34■□□□□ 0.37
PHF1-211ENST00000495509 GRIK4Q16099 956 aa17.34■□□□□ 0.37
PHF1-211ENST00000495509 ZC2HC1CQ53FD0 456 aaPredicted RBP17.34■□□□□ 0.37
PHF1-211ENST00000495509 AOPEPQ8N6M6 819 aa17.34■□□□□ 0.37
PHF1-211ENST00000495509 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.34■□□□□ 0.372e-7■■□□□ 12
PHF1-211ENST00000495509 POLR3FQ9H1D9 316 aaPredicted RBP17.34■□□□□ 0.37
PHF1-211ENST00000495509 GOLGA6L3A6NEY3 463 aa17.33■□□□□ 0.37
PHF1-211ENST00000495509 C22orf31O95567 290 aa17.33■□□□□ 0.37
PHF1-211ENST00000495509 ARL2P36404 184 aa17.33■□□□□ 0.37
PHF1-211ENST00000495509 PMS1P54277 932 aaKnown RBP17.33■□□□□ 0.37
PHF1-211ENST00000495509 EFCAB12Q6NXP0 572 aa17.33■□□□□ 0.37
PHF1-211ENST00000495509 ZNF720Q7Z2F6 126 aa17.33■□□□□ 0.37
PHF1-211ENST00000495509 KSR1Q8IVT5 923 aa17.33■□□□□ 0.37
PHF1-211ENST00000495509 FAM178BQ8IXR5 827 aa17.33■□□□□ 0.37
PHF1-211ENST00000495509 ASAP3Q8TDY4 903 aa17.33■□□□□ 0.37
PHF1-211ENST00000495509 KIFAP3Q92845 792 aa17.33■□□□□ 0.37
PHF1-211ENST00000495509 NAT10Q9H0A0 1025 aaKnown RBP17.33■□□□□ 0.37
PHF1-211ENST00000495509 OLFML3Q9NRN5 406 aa17.33■□□□□ 0.37
PHF1-211ENST00000495509 SEL1LQ9UBV2 794 aa17.33■□□□□ 0.37
PHF1-211ENST00000495509 CTNND2Q9UQB3 1225 aa17.33■□□□□ 0.37
PHF1-211ENST00000495509 KPNA6O60684 536 aa17.33■□□□□ 0.36
PHF1-211ENST00000495509 PRPF6O94906 941 aaKnown RBP17.33■□□□□ 0.36
PHF1-211ENST00000495509 ZNF200P98182 395 aaPredicted RBP17.33■□□□□ 0.36
PHF1-211ENST00000495509 KCNA1Q09470 495 aa17.33■□□□□ 0.36
PHF1-211ENST00000495509 L1TD1Q5T7N2 865 aaKnown RBP17.33■□□□□ 0.36
PHF1-211ENST00000495509 EPM2AIP1Q7L775 607 aaPredicted RBP17.33■□□□□ 0.36
PHF1-211ENST00000495509 METTL13Q8N6R0 699 aa17.33■□□□□ 0.36
PHF1-211ENST00000495509 SCFD1Q8WVM8 642 aa17.33■□□□□ 0.36
PHF1-211ENST00000495509 NELFBQ8WX92 580 aa17.33■□□□□ 0.36
PHF1-211ENST00000495509 MTG1Q9BT17 334 aaPredicted RBP17.33■□□□□ 0.36
PHF1-211ENST00000495509 KIFC3Q9BVG8 833 aa17.33■□□□□ 0.36
PHF1-211ENST00000495509 LARSQ9P2J5 1176 aaKnown RBP17.33■□□□□ 0.36
PHF1-211ENST00000495509 DACH1Q9UI36 760 aa17.33■□□□□ 0.36
PHF1-211ENST00000495509 PPME1Q9Y570 386 aa17.33■□□□□ 0.36
PHF1-211ENST00000495509 SCN10AQ9Y5Y9 1956 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 TRIM49BA6NDI0 452 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 SLC16A4O15374 487 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 ZEB2O60315 1214 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 MSCO60682 206 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 GCNT3O95395 438 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 CAVIN2O95810 425 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 GJB1P08034 283 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 GLRA2P23416 452 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 CST5P28325 142 aaPredicted RBP17.32■□□□□ 0.36
PHF1-211ENST00000495509 HOXD13P35453 343 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 NPTX2P47972 431 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 CLCN3P51790 818 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 NCAPHQ15003 741 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 COBLL1Q53SF7 1204 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 MTHFD1LQ6UB35 978 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 NELFCDQ8IXH7 590 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 GUF1Q8N442 669 aaKnown RBP17.32■□□□□ 0.36
PHF1-211ENST00000495509 LMBR1Q8WVP7 490 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 PRPF31Q8WWY3 499 aaKnown RBP17.32■□□□□ 0.36
PHF1-211ENST00000495509 BPIFA3Q9BQP9 254 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 IKZF4Q9H2S9 585 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 SEMA6BQ9H3T3 888 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 HDAC6Q9UBN7 1215 aa17.32■□□□□ 0.36
PHF1-211ENST00000495509 FRMPD3Q5JV73 1810 aa17.31■□□□□ 0.36
PHF1-211ENST00000495509 CCDC169A6NNP5 214 aa17.31■□□□□ 0.36
PHF1-211ENST00000495509 CCL5P13501 91 aa17.31■□□□□ 0.36
PHF1-211ENST00000495509 ERCC5P28715 1186 aaPredicted RBP17.31■□□□□ 0.36
PHF1-211ENST00000495509 NBPF20Q3BBV1 942 aa17.31■□□□□ 0.36
PHF1-211ENST00000495509 RNF180Q86T96 592 aa17.31■□□□□ 0.36
PHF1-211ENST00000495509 MYOCDQ8IZQ8 938 aa17.31■□□□□ 0.36
PHF1-211ENST00000495509 COL1A2P08123 1366 aa17.31■□□□□ 0.36
PHF1-211ENST00000495509 ADGRA3Q8IWK6 1321 aa17.31■□□□□ 0.36
PHF1-211ENST00000495509 PAK1Q13153 545 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 STIM1Q13586 685 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 IER5Q5VY09 327 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 LINC01465Q8N7H1 131 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 ZNF507Q8TCN5 953 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 DHTKD1Q96HY7 919 aaPredicted RBP17.3■□□□□ 0.36
PHF1-211ENST00000495509 ZNF668Q96K58 619 aaPredicted RBP17.3■□□□□ 0.36
PHF1-211ENST00000495509 DEFB118Q96PH6 123 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 NTPCRQ9BSD7 190 aaKnown RBP17.3■□□□□ 0.36
PHF1-211ENST00000495509 KATNAL1Q9BW62 490 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 STRA6Q9BX79 667 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 GTPBP4Q9BZE4 634 aaKnown RBP17.3■□□□□ 0.36
PHF1-211ENST00000495509 RNF208Q9H0X6 261 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 PAK6Q9NQU5 681 aaPredicted RBP17.3■□□□□ 0.36
PHF1-211ENST00000495509 SUCLA2Q9P2R7 463 aaPredicted RBP17.3■□□□□ 0.36
PHF1-211ENST00000495509 GRIN2DO15399 1336 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 NRCAMQ92823 1304 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 RRN3P2A6NIE6 340 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 K7ENM7 598 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 PSMA7O14818 248 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 MAGEB2O15479 319 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 ACLYP53396 1101 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 RTP1P59025 263 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 ADAM17P78536 824 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 DMP1Q13316 513 aaPredicted RBP17.3■□□□□ 0.36
PHF1-211ENST00000495509 CT47A1Q5JQC4 288 aaPredicted RBP17.3■□□□□ 0.36
PHF1-211ENST00000495509 ANKRD40Q6AI12 368 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 FBXO46Q6PJ61 603 aaPredicted RBP17.3■□□□□ 0.36
PHF1-211ENST00000495509 HAUS6Q7Z4H7 955 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 EXOC8Q8IYI6 725 aa17.3■□□□□ 0.36
PHF1-211ENST00000495509 C7orf31Q8N865 590 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms