RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 PADI6Q6TGC4 694 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 LINC01465Q8N7H1 131 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 MCPH1Q8NEM0 835 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 HERVK_113Q902F9 699 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 TMEM143Q96AN5 459 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 CLIC6Q96NY7 704 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 PLIN2Q99541 437 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 OSMRQ99650 979 aa13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 MMTAG2Q9BU76 263 aaKnown RBP13.44□□□□□ -0.26
CSNK1E-213ENST00000495232 ABHD14A-ACY1A0A1B0GW23 586 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 E9PMD0 336 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 GPR182O15218 404 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 CUTAO60888 179 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 GPR32O75388 356 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 GPC3P51654 580 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 NFX1Q12986 1120 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 MKRN4PQ13434 485 aaPredicted RBP13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 TFDP1Q14186 410 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 MXD4Q14582 209 aaPredicted RBP13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 LPIN1Q14693 890 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 GPNMBQ14956 572 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 FAM102BQ5T8I3 360 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 MAEAQ7L5Y9 396 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 ZNF410Q86VK4 478 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 DBF4BQ8NFT6 615 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 PRPF31Q8WWY3 499 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 SYMPKQ92797 1274 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 EPSTI1Q96J88 318 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 SPATA32Q96LK8 384 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 NLRP4Q96MN2 994 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 GCOM2Q9BZD3 368 aaPredicted RBP13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 INO80BQ9C086 356 aaPredicted RBP13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 CCSER1Q9C0I3 900 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 COL4A3BPQ9Y5P4 624 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 SLC4A7Q9Y6M7 1214 aa13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 LAMA2P24043 3122 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-213ENST00000495232 SRGAP2CP0DJJ0 459 aa13.42□□□□□ -0.26
CSNK1E-213ENST00000495232 CYP11B2P19099 503 aa13.42□□□□□ -0.26
CSNK1E-213ENST00000495232 EIF4BP23588 611 aaKnown RBP13.42□□□□□ -0.26
CSNK1E-213ENST00000495232 CD52P31358 61 aa13.42□□□□□ -0.26
CSNK1E-213ENST00000495232 LAMTOR4Q0VGL1 99 aa13.42□□□□□ -0.26
CSNK1E-213ENST00000495232 GRB10Q13322 594 aa13.42□□□□□ -0.26
CSNK1E-213ENST00000495232 KARSQ15046 597 aaKnown RBP13.42□□□□□ -0.26
CSNK1E-213ENST00000495232 ZNF668Q96K58 619 aaPredicted RBP13.42□□□□□ -0.26
CSNK1E-213ENST00000495232 PNMA5Q96PV4 448 aa13.42□□□□□ -0.26
CSNK1E-213ENST00000495232 FTHL17Q9BXU8 183 aa13.42□□□□□ -0.26
CSNK1E-213ENST00000495232 SCAND2PQ9GZW5 306 aaPredicted RBP13.42□□□□□ -0.26
CSNK1E-213ENST00000495232 CDHR5Q9HBB8 845 aa13.42□□□□□ -0.26
CSNK1E-213ENST00000495232 CIZ1Q9ULV3 898 aaPredicted RBP13.42□□□□□ -0.26
CSNK1E-213ENST00000495232 PADI3Q9ULW8 664 aa13.42□□□□□ -0.26
CSNK1E-213ENST00000495232 A0A087WZ62 844 aa13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 PLA2G4BP0C869 781 aa13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 PLCG1P19174 1290 aa13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 TMEM119Q4V9L6 283 aa13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 RRAGBQ5VZM2 374 aa13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 CCDC73Q6ZRK6 1079 aa13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 FAM43BQ6ZT52 329 aaPredicted RBP13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 KSR1Q8IVT5 923 aa13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 RNF149Q8NC42 400 aa13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 TET1Q8NFU7 2136 aa13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 VWCEQ96DN2 955 aa13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 IFT74Q96LB3 600 aa13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 FDXACB1Q9BRP7 624 aaPredicted RBP13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 POLR3FQ9H1D9 316 aaPredicted RBP13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 ADAMTS10Q9H324 1103 aa13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 XPNPEP1Q9NQW7 623 aa13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 RCOR1Q9UKL0 485 aa13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 NOC2LQ9Y3T9 749 aaKnown RBP13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 RBM19Q9Y4C8 960 aaKnown RBP13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 SIP14410 1827 aa13.41□□□□□ -0.26
CSNK1E-213ENST00000495232 DENND3A2RUS2 1198 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 AMHP03971 560 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 DARSP14868 501 aaKnown RBP13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 ZSCAN20P17040 1043 aaPredicted RBP13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 SFPQP23246 707 aaKnown RBP eCLIP13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 DDIT3P35638 169 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 ARL2P36404 184 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 STAT6P42226 847 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 PHKA2P46019 1235 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 DHX8Q14562 1220 aaKnown RBP13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 PPP2R5AQ15172 486 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 HABP4Q5JVS0 413 aaKnown RBP13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 USP49Q70CQ1 688 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 KCNK18Q7Z418 384 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 SYT2Q8N9I0 419 aaPredicted RBP13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 TMEM40Q8WWA1 233 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 KIFAP3Q92845 792 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 SLC9A7Q96T83 725 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 TIPINQ9BVW5 301 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 OSBPL7Q9BZF2 842 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 AGO3Q9H9G7 860 aaKnown RBP13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 FAM13BQ9NYF5 915 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 KCND2Q9NZV8 630 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 CXXC1Q9P0U4 656 aaPredicted RBP13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 PCDHA7Q9UN72 937 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 ST3GAL5Q9UNP4 418 aa13.4□□□□□ -0.26
CSNK1E-213ENST00000495232 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 LRRIQ4A6NIV6 560 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 KRT18P05783 430 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms