RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 PDIA5Q14554 519 aa23.15■■□□□ 1.3
CCDC12-207ENST00000494655 KRT79Q5XKE5 535 aa23.15■■□□□ 1.3
CCDC12-207ENST00000494655 FERMT3Q86UX7 667 aa23.15■■□□□ 1.3
CCDC12-207ENST00000494655 CATSPER3Q86XQ3 398 aa23.15■■□□□ 1.3
CCDC12-207ENST00000494655 C4orf32Q8N8J7 132 aa23.15■■□□□ 1.3
CCDC12-207ENST00000494655 NLRP4Q96MN2 994 aa23.15■■□□□ 1.3
CCDC12-207ENST00000494655 CDX2Q99626 313 aaPredicted RBP23.15■■□□□ 1.3
CCDC12-207ENST00000494655 CDHR5Q9HBB8 845 aa23.15■■□□□ 1.3
CCDC12-207ENST00000494655 C1orf112Q9NSG2 853 aa23.15■■□□□ 1.3
CCDC12-207ENST00000494655 BMP2KQ9NSY1 1161 aaPredicted RBP23.15■■□□□ 1.3
CCDC12-207ENST00000494655 ST3GAL5Q9UNP4 418 aa23.15■■□□□ 1.3
CCDC12-207ENST00000494655 STXBP5LQ9Y2K9 1186 aa23.15■■□□□ 1.3
CCDC12-207ENST00000494655 COL4A3BPQ9Y5P4 624 aa23.15■■□□□ 1.3
CCDC12-207ENST00000494655 COL4A6Q14031 1691 aa23.15■■□□□ 1.3
CCDC12-207ENST00000494655 STAG3L1P0CL83 205 aa23.14■■□□□ 1.29
CCDC12-207ENST00000494655 SYT1P21579 422 aa23.14■■□□□ 1.29
CCDC12-207ENST00000494655 ATP2C1P98194 919 aaPredicted RBP23.14■■□□□ 1.29
CCDC12-207ENST00000494655 DRP2Q13474 957 aa23.14■■□□□ 1.29
CCDC12-207ENST00000494655 FAM228AQ86W67 206 aa23.14■■□□□ 1.29
CCDC12-207ENST00000494655 SNX29Q8TEQ0 813 aa23.14■■□□□ 1.29
CCDC12-207ENST00000494655 TSPYL2Q9H2G4 693 aaPredicted RBP23.14■■□□□ 1.29
CCDC12-207ENST00000494655 ADAMTS10Q9H324 1103 aa23.14■■□□□ 1.29
CCDC12-207ENST00000494655 LRFN2Q9ULH4 789 aa23.14■■□□□ 1.29
CCDC12-207ENST00000494655 ENPP3O14638 875 aa23.13■■□□□ 1.29
CCDC12-207ENST00000494655 MED24O75448 989 aa23.13■■□□□ 1.29
CCDC12-207ENST00000494655 DARSP14868 501 aaKnown RBP23.13■■□□□ 1.29
CCDC12-207ENST00000494655 ZSCAN20P17040 1043 aaPredicted RBP23.13■■□□□ 1.29
CCDC12-207ENST00000494655 RARRES1P49788 294 aa23.13■■□□□ 1.29
CCDC12-207ENST00000494655 GRIN2CQ14957 1233 aa23.13■■□□□ 1.29
CCDC12-207ENST00000494655 ARL6IP4Q66PJ3 421 aaKnown RBP23.13■■□□□ 1.29
CCDC12-207ENST00000494655 POTEGQ6S5H5 508 aa23.13■■□□□ 1.29
CCDC12-207ENST00000494655 IGSF22Q8N9C0 903 aa23.13■■□□□ 1.29
CCDC12-207ENST00000494655 PIGOQ8TEQ8 1089 aa23.13■■□□□ 1.29
CCDC12-207ENST00000494655 ZNF668Q96K58 619 aaPredicted RBP23.13■■□□□ 1.29
CCDC12-207ENST00000494655 DBR1Q9UK59 544 aaKnown RBP23.13■■□□□ 1.29
CCDC12-207ENST00000494655 ARHGEF35A5YM69 484 aa23.12■■□□□ 1.29
CCDC12-207ENST00000494655 ASAP2O43150 1006 aa23.12■■□□□ 1.29
CCDC12-207ENST00000494655 SPATA31C1P0DKV0 1188 aa23.12■■□□□ 1.29
CCDC12-207ENST00000494655 PDIA4P13667 645 aaKnown RBP23.12■■□□□ 1.29
CCDC12-207ENST00000494655 HTRA4P83105 476 aaPredicted RBP23.12■■□□□ 1.29
CCDC12-207ENST00000494655 TFDP1Q14186 410 aa23.12■■□□□ 1.29
CCDC12-207ENST00000494655 MXD4Q14582 209 aaPredicted RBP23.12■■□□□ 1.29
CCDC12-207ENST00000494655 NPAS4Q8IUM7 802 aa23.12■■□□□ 1.29
CCDC12-207ENST00000494655 ZNF579Q8NAF0 562 aaKnown RBP23.12■■□□□ 1.29
CCDC12-207ENST00000494655 MYLIPQ8WY64 445 aa23.12■■□□□ 1.29
CCDC12-207ENST00000494655 TMEM143Q96AN5 459 aa23.12■■□□□ 1.29
CCDC12-207ENST00000494655 PRDM12Q9H4Q4 367 aa23.12■■□□□ 1.29
CCDC12-207ENST00000494655 A0A087WZ62 844 aa23.11■■□□□ 1.29
CCDC12-207ENST00000494655 ZBTB39O15060 712 aa23.11■■□□□ 1.29
CCDC12-207ENST00000494655 STX6O43752 255 aa23.11■■□□□ 1.29
CCDC12-207ENST00000494655 USO1O60763 962 aaKnown RBP23.11■■□□□ 1.29
CCDC12-207ENST00000494655 IBSPP21815 317 aaPredicted RBP23.11■■□□□ 1.29
CCDC12-207ENST00000494655 TAP1Q03518 808 aa23.11■■□□□ 1.29
CCDC12-207ENST00000494655 MCPH1Q8NEM0 835 aa23.11■■□□□ 1.29
CCDC12-207ENST00000494655 ADAM2Q99965 735 aa23.11■■□□□ 1.29
CCDC12-207ENST00000494655 FDXACB1Q9BRP7 624 aaPredicted RBP23.11■■□□□ 1.29
CCDC12-207ENST00000494655 TMX1Q9H3N1 280 aa23.11■■□□□ 1.29
CCDC12-207ENST00000494655 TTC3P53804 2025 aa23.1■■□□□ 1.29
CCDC12-207ENST00000494655 LCHNA4D1U4 455 aa23.1■■□□□ 1.29
CCDC12-207ENST00000494655 VWA3AA6NCI4 1184 aa23.1■■□□□ 1.29
CCDC12-207ENST00000494655 PHKA2P46019 1235 aa23.1■■□□□ 1.29
CCDC12-207ENST00000494655 SARSP49591 514 aaKnown RBP23.1■■□□□ 1.29
CCDC12-207ENST00000494655 SLC24A5Q71RS6 500 aa23.1■■□□□ 1.29
CCDC12-207ENST00000494655 PRPF31Q8WWY3 499 aaKnown RBP23.1■■□□□ 1.29
CCDC12-207ENST00000494655 LINC01599Q8WXQ3 324 aa23.1■■□□□ 1.29
CCDC12-207ENST00000494655 ARNTL2Q8WYA1 636 aa23.1■■□□□ 1.29
CCDC12-207ENST00000494655 CDK5RAP3Q96JB5 506 aa23.1■■□□□ 1.29
CCDC12-207ENST00000494655 TGS1Q96RS0 853 aaKnown RBP23.1■■□□□ 1.29
CCDC12-207ENST00000494655 ZSCAN16Q9H4T2 348 aaPredicted RBP23.1■■□□□ 1.29
CCDC12-207ENST00000494655 RGS18Q9NS28 235 aa23.1■■□□□ 1.29
CCDC12-207ENST00000494655 DACT1Q9NYF0 836 aa23.1■■□□□ 1.29
CCDC12-207ENST00000494655 ADGRA3Q8IWK6 1321 aa23.09■■□□□ 1.29
CCDC12-207ENST00000494655 RALGAPA2Q2PPJ7 1873 aa23.09■■□□□ 1.29
CCDC12-207ENST00000494655 LAMTOR4Q0VGL1 99 aa23.09■■□□□ 1.29
CCDC12-207ENST00000494655 SP7Q8TDD2 431 aaPredicted RBP23.09■■□□□ 1.29
CCDC12-207ENST00000494655 SAMD11Q96NU1 681 aa23.09■■□□□ 1.29
CCDC12-207ENST00000494655 KIAA1024Q9UPX6 916 aa23.09■■□□□ 1.29
CCDC12-207ENST00000494655 PCDHB7Q9Y5E2 793 aa23.09■■□□□ 1.29
CCDC12-207ENST00000494655 COL4A4P53420 1690 aaPredicted RBP23.09■■□□□ 1.29
CCDC12-207ENST00000494655 NLRC5Q86WI3 1866 aa23.09■■□□□ 1.29
CCDC12-207ENST00000494655 LINC01553A4QN01 128 aa23.08■■□□□ 1.29
CCDC12-207ENST00000494655 SRGAP2CP0DJJ0 459 aa23.08■■□□□ 1.29
CCDC12-207ENST00000494655 CATSPER4Q7RTX7 472 aa23.08■■□□□ 1.29
CCDC12-207ENST00000494655 SRGAP1Q7Z6B7 1085 aa23.08■■□□□ 1.29
CCDC12-207ENST00000494655 KSR1Q8IVT5 923 aa23.08■■□□□ 1.29
CCDC12-207ENST00000494655 FIBCD1Q8N539 461 aa23.08■■□□□ 1.29
CCDC12-207ENST00000494655 RNF149Q8NC42 400 aa23.08■■□□□ 1.29
CCDC12-207ENST00000494655 AK8Q96MA6 479 aa23.08■■□□□ 1.29
CCDC12-207ENST00000494655 CERS4Q9HA82 394 aa23.08■■□□□ 1.29
CCDC12-207ENST00000494655 DDX19AQ9NUU7 478 aaKnown RBP23.08■■□□□ 1.29
CCDC12-207ENST00000494655 MTUS1Q9ULD2 1270 aa23.08■■□□□ 1.29
CCDC12-207ENST00000494655 RWDD3Q9Y3V2 267 aa23.08■■□□□ 1.29
CCDC12-207ENST00000494655 MYH15Q9Y2K3 1946 aa23.08■■□□□ 1.28
CCDC12-207ENST00000494655 RBAK-RBAKDNI3L0D1 243 aa23.07■■□□□ 1.28
CCDC12-207ENST00000494655 RESTQ13127 1097 aa23.07■■□□□ 1.28
CCDC12-207ENST00000494655 BTG3Q14201 252 aaPredicted RBP23.07■■□□□ 1.28
CCDC12-207ENST00000494655 SF3A1Q15459 793 aaKnown RBP23.07■■□□□ 1.28
CCDC12-207ENST00000494655 ZRSR1Q15695 479 aaKnown RBP23.07■■□□□ 1.28
CCDC12-207ENST00000494655 PADI6Q6TGC4 694 aa23.07■■□□□ 1.28
CCDC12-207ENST00000494655 RASSF8Q8NHQ8 419 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms