RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 TMOD4Q9NZQ9 345 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 BTBD7Q9P203 1132 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 CEP72Q9P209 647 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 FBXL5Q9UKA1 691 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 TNRC18O15417 2968 aaPredicted RBP12.08□□□□□ -0.48
ZIC4-216ENST00000494569 CETN3O15182 167 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 TLR2O60603 784 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 HIP1RO75146 1068 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 TBCAO75347 108 aaKnown RBP12.08□□□□□ -0.48
ZIC4-216ENST00000494569 ATG7O95352 703 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 NCKAP1LP55160 1127 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 FKBP1BP68106 108 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 NSUN6Q8TEA1 469 aaKnown RBP12.08□□□□□ -0.48
ZIC4-216ENST00000494569 SFI1A8K8P3 1242 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 PJA2O43164 708 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 ZC2HC1CQ53FD0 456 aaPredicted RBP12.08□□□□□ -0.48
ZIC4-216ENST00000494569 PADI6Q6TGC4 694 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 DNERQ8NFT8 737 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 IWS1Q96ST2 819 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 MOV10L1Q9BXT6 1211 aaKnown RBP12.08□□□□□ -0.48
ZIC4-216ENST00000494569 EPC1Q9H2F5 836 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 IKZF4Q9H2S9 585 aa12.08□□□□□ -0.48
ZIC4-216ENST00000494569 GTPBP10A4D1E9 387 aaKnown RBP12.07□□□□□ -0.48
ZIC4-216ENST00000494569 SPDYE5A6NIY4 337 aa12.07□□□□□ -0.48
ZIC4-216ENST00000494569 WDR64B1ANS9 1081 aa12.07□□□□□ -0.48
ZIC4-216ENST00000494569 TRIM21P19474 475 aaKnown RBP12.07□□□□□ -0.48
ZIC4-216ENST00000494569 CLCN6P51797 869 aa12.07□□□□□ -0.48
ZIC4-216ENST00000494569 PSMC5P62195 406 aa12.07□□□□□ -0.48
ZIC4-216ENST00000494569 CREBRFQ8IUR6 639 aa12.07□□□□□ -0.48
ZIC4-216ENST00000494569 SLC35C1Q96A29 364 aa12.07□□□□□ -0.48
ZIC4-216ENST00000494569 TELO2Q9Y4R8 837 aa12.07□□□□□ -0.48
ZIC4-216ENST00000494569 FAM13AO94988 1023 aa12.07□□□□□ -0.48
ZIC4-216ENST00000494569 GCNT3O95395 438 aa12.07□□□□□ -0.48
ZIC4-216ENST00000494569 YWHABP31946 246 aaKnown RBP12.07□□□□□ -0.48
ZIC4-216ENST00000494569 CASP4P49662 377 aa12.07□□□□□ -0.48
ZIC4-216ENST00000494569 GTF2BQ00403 316 aa12.07□□□□□ -0.48
ZIC4-216ENST00000494569 KCNH2Q12809 1159 aa12.07□□□□□ -0.48
ZIC4-216ENST00000494569 DCPSQ96C86 337 aaKnown RBP12.07□□□□□ -0.48
ZIC4-216ENST00000494569 SYT11Q9BT88 431 aa12.07□□□□□ -0.48
ZIC4-216ENST00000494569 POLD4Q9HCU8 107 aa12.07□□□□□ -0.48
ZIC4-216ENST00000494569 IGSF9BQ9UPX0 1349 aa12.07□□□□□ -0.48
ZIC4-216ENST00000494569 IGKV6D-21A0A0A0MT36 114 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 LRRC53A6NM62 1247 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 DDX39AO00148 427 aaKnown RBP12.06□□□□□ -0.48
ZIC4-216ENST00000494569 BACH1O14867 736 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 PAPD7Q5XG87 772 aaKnown RBP12.06□□□□□ -0.48
ZIC4-216ENST00000494569 ABHD15Q6UXT9 468 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 NSMFQ6X4W1 530 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 ANO5Q75V66 913 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 TRAPPC11Q7Z392 1133 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 MYCT1Q8N699 235 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 SMCR8Q8TEV9 937 aaPredicted RBP12.06□□□□□ -0.48
ZIC4-216ENST00000494569 CEP89Q96ST8 783 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 AGPAT3Q9NRZ7 376 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 AIPL1Q9NZN9 384 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 USP20Q9Y2K6 914 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.06□□□□□ -0.48
ZIC4-216ENST00000494569 FHOD1Q9Y613 1164 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 EFCAB8A8MWE9 144 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 CXCL11O14625 94 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 ZNF862O60290 1169 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 PLS3P13797 630 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 JAM2P57087 298 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 ALCAMQ13740 583 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 CCDC40Q4G0X9 1142 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 CDCA5Q96FF9 252 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 FGD4Q96M96 766 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 METTL14Q9HCE5 456 aaKnown RBP12.06□□□□□ -0.48
ZIC4-216ENST00000494569 SSU72P8A0A1W2PR75 194 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 ARHGEF35A5YM69 484 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 PLEKP08567 350 aaPredicted RBP12.06□□□□□ -0.48
ZIC4-216ENST00000494569 ZNF157P51786 506 aaPredicted RBP12.06□□□□□ -0.48
ZIC4-216ENST00000494569 ARHGAP29Q52LW3 1261 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 NLRX1Q86UT6 975 aa12.06□□□□□ -0.48
ZIC4-216ENST00000494569 MYCLP12524 364 aaPredicted RBP12.05□□□□□ -0.48
ZIC4-216ENST00000494569 CASQ1P31415 396 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 SOX10P56693 466 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 GNG11P61952 73 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 SP2Q02086 613 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 GPAT2Q6NUI2 795 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 KRT222Q8N1A0 295 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 MSANTD4Q8NCY6 345 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 NTPCRQ9BSD7 190 aaKnown RBP12.05□□□□□ -0.48
ZIC4-216ENST00000494569 HAUS4Q9H6D7 363 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 ANKZF1Q9H8Y5 726 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 FAM207AQ9NSI2 230 aaPredicted RBP12.05□□□□□ -0.48
ZIC4-216ENST00000494569 RAB21Q9UL25 225 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 MYO6Q9UM54 1294 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 PLXNA1Q9UIW2 1896 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 MAPK13O15264 365 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 AFPP02771 609 aaKnown RBP12.05□□□□□ -0.48
ZIC4-216ENST00000494569 SNRPFP62306 86 aaKnown RBP12.05□□□□□ -0.48
ZIC4-216ENST00000494569 PPIL2Q13356 520 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 LDLRAD1Q5T700 205 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 ERO1BQ86YB8 467 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 NUCKS1Q9H1E3 243 aaKnown RBP12.05□□□□□ -0.48
ZIC4-216ENST00000494569 LZTFL1Q9NQ48 299 aa12.05□□□□□ -0.48
ZIC4-216ENST00000494569 ARMCX3Q9UH62 379 aaPredicted RBP12.05□□□□□ -0.48
ZIC4-216ENST00000494569 RPL13P26373 211 aaKnown RBP12.04□□□□□ -0.48
ZIC4-216ENST00000494569 PON1P27169 355 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms