RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 TMEM192Q8IY95 271 aa14.77□□□□□ -0.04
ERCC3-209ENST00000494464 CMTR2Q8IYT2 770 aaKnown RBP14.77□□□□□ -0.04
ERCC3-209ENST00000494464 FBXO18Q8NFZ0 1043 aa14.77□□□□□ -0.04
ERCC3-209ENST00000494464 CLP1Q92989 425 aaKnown RBP14.77□□□□□ -0.04
ERCC3-209ENST00000494464 GBP4Q96PP9 640 aa14.77□□□□□ -0.04
ERCC3-209ENST00000494464 LXNQ9BS40 222 aa14.77□□□□□ -0.04
ERCC3-209ENST00000494464 FOXP1Q9H334 677 aaPredicted RBP14.77□□□□□ -0.04
ERCC3-209ENST00000494464 PRDM6Q9NQX0 595 aa14.77□□□□□ -0.04
ERCC3-209ENST00000494464 RGS18Q9NS28 235 aa14.77□□□□□ -0.04
ERCC3-209ENST00000494464 WRAP73Q9P2S5 460 aaPredicted RBP14.77□□□□□ -0.04
ERCC3-209ENST00000494464 ATG2AQ2TAZ0 1938 aa14.77□□□□□ -0.04
ERCC3-209ENST00000494464 DENND3A2RUS2 1198 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 C9IYK1 514 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 H3BNC9 293 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 DLL1O00548 723 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 PTMSP20962 102 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 GUCY1B3Q02153 619 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 DRP2Q13474 957 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 BTG3Q14201 252 aaPredicted RBP14.76□□□□□ -0.05
ERCC3-209ENST00000494464 DSC3Q14574 896 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 PLA2G4FQ68DD2 849 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 NCAPH2Q6IBW4 605 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 FAM184AQ8NB25 1140 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 NEK9Q8TD19 979 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 MTMR9Q96QG7 549 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 ADAM2Q99965 735 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 CYP26B1Q9NR63 512 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 PCDHA12Q9UN75 941 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.76□□□□□ -0.05
ERCC3-209ENST00000494464 XIRP2A4UGR9 3374 aa14.76□□□□□ -0.05
ERCC3-209ENST00000494464 RB1P06400 928 aa14.75□□□□□ -0.05
ERCC3-209ENST00000494464 DARSP14868 501 aaKnown RBP14.75□□□□□ -0.05
ERCC3-209ENST00000494464 YWHABP31946 246 aaKnown RBP14.75□□□□□ -0.05
ERCC3-209ENST00000494464 DNM2P50570 870 aa14.75□□□□□ -0.05
ERCC3-209ENST00000494464 TJAP1Q5JTD0 557 aa14.75□□□□□ -0.05
ERCC3-209ENST00000494464 SLC24A5Q71RS6 500 aa14.75□□□□□ -0.05
ERCC3-209ENST00000494464 ZNF410Q86VK4 478 aa14.75□□□□□ -0.05
ERCC3-209ENST00000494464 EXOC8Q8IYI6 725 aa14.75□□□□□ -0.05
ERCC3-209ENST00000494464 MRPL38Q96DV4 380 aaKnown RBP14.75□□□□□ -0.05
ERCC3-209ENST00000494464 SH2D3AQ9BRG2 576 aa14.75□□□□□ -0.05
ERCC3-209ENST00000494464 COL25A1Q9BXS0 654 aaPredicted RBP14.75□□□□□ -0.05
ERCC3-209ENST00000494464 DHX33Q9H6R0 707 aaKnown RBP14.75□□□□□ -0.05
ERCC3-209ENST00000494464 ELAC1Q9H777 363 aaKnown RBP14.75□□□□□ -0.05
ERCC3-209ENST00000494464 ZSWIM4Q9H7M6 989 aa14.75□□□□□ -0.05
ERCC3-209ENST00000494464 TTC12Q9H892 705 aaPredicted RBP14.75□□□□□ -0.05
ERCC3-209ENST00000494464 LRFN2Q9ULH4 789 aa14.75□□□□□ -0.05
ERCC3-209ENST00000494464 SPTBN5Q9NRC6 3674 aaKnown RBP14.74□□□□□ -0.05
ERCC3-209ENST00000494464 GAS2O43903 313 aaKnown RBP14.74□□□□□ -0.05
ERCC3-209ENST00000494464 LYPLA2O95372 231 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 CTNNB1P35222 781 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 BMPR1AP36894 532 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 RFC5P40937 340 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 GPM6BQ13491 265 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 PTPROQ16827 1216 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 NLRP7Q8WX94 980 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 SLC7A3Q8WY07 619 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 SYMPKQ92797 1274 aaKnown RBP14.74□□□□□ -0.05
ERCC3-209ENST00000494464 DYDC2Q96IM9 177 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 CEP170P1Q96L14 293 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 SCLT1Q96NL6 688 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 C11orf84Q9BUA3 381 aaPredicted RBP14.74□□□□□ -0.05
ERCC3-209ENST00000494464 PLVAPQ9BX97 442 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 TMEM161AQ9NX61 479 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 RGL1Q9NZL6 768 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 COG5Q9UP83 839 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 KIF3AQ9Y496 699 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 PCDHB7Q9Y5E2 793 aa14.74□□□□□ -0.05
ERCC3-209ENST00000494464 TRAPPC10P48553 1259 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 POLGP54098 1239 aaPredicted RBP14.73□□□□□ -0.05
ERCC3-209ENST00000494464 NPEPPSP55786 919 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 FAM189BP81408 668 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 MRPS5P82675 430 aaKnown RBP14.73□□□□□ -0.05
ERCC3-209ENST00000494464 CYP4A11Q02928 519 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 SKIV2LQ15477 1246 aaKnown RBP14.73□□□□□ -0.05
ERCC3-209ENST00000494464 TIGD5Q53EQ6 642 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 OTUD6AQ7L8S5 288 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 NOSTRINQ8IVI9 506 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 ASB2Q96Q27 587 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 HSD17B14Q9BPX1 270 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 EIF2AK1Q9BQI3 630 aaKnown RBP14.73□□□□□ -0.05
ERCC3-209ENST00000494464 GCOM2Q9BZD3 368 aaPredicted RBP14.73□□□□□ -0.05
ERCC3-209ENST00000494464 LMAN2LQ9H0V9 348 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 TMEM60Q9H2L4 133 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 SUCLA2Q9P2R7 463 aaPredicted RBP14.73□□□□□ -0.05
ERCC3-209ENST00000494464 MRPL42Q9Y6G3 142 aaKnown RBP14.73□□□□□ -0.05
ERCC3-209ENST00000494464 SLITRK3O94933 977 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 ZSCAN20P17040 1043 aaPredicted RBP14.73□□□□□ -0.05
ERCC3-209ENST00000494464 SFPQP23246 707 aaKnown RBP eCLIP14.73□□□□□ -0.05
ERCC3-209ENST00000494464 MCM7P33993 719 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 TXKP42681 527 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 CTTNQ14247 550 aaKnown RBP14.73□□□□□ -0.05
ERCC3-209ENST00000494464 AAK1Q2M2I8 961 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 RHPN2Q8IUC4 686 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 P2RX5Q93086 422 aa14.73□□□□□ -0.05
ERCC3-209ENST00000494464 ZNF668Q96K58 619 aaPredicted RBP14.73□□□□□ -0.05
ERCC3-209ENST00000494464 INO80BQ9C086 356 aaPredicted RBP14.73□□□□□ -0.05
ERCC3-209ENST00000494464 A0A087WZ62 844 aa14.72□□□□□ -0.05
ERCC3-209ENST00000494464 POTEMA6NI47 508 aa14.72□□□□□ -0.05
ERCC3-209ENST00000494464 BRD1O95696 1058 aa14.72□□□□□ -0.05
ERCC3-209ENST00000494464 OR52Z1P0C646 297 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms