RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 ASNSP08243 561 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 FSTL1Q12841 308 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 MAPK7Q13164 816 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 EPHA7Q15375 998 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 IQCEQ6IPM2 695 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 NAP1L4Q99733 375 aaKnown RBP13.54□□□□□ -0.24
PHF3-205ENST00000494284 MXRA8Q9BRK3 442 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 CBWD1Q9BRT8 395 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 DEFB129Q9H1M3 183 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 RPAP3Q9H6T3 665 aaPredicted RBP13.54□□□□□ -0.24
PHF3-205ENST00000494284 STIM2Q9P246 746 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 DOCK5Q9H7D0 1870 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 COPB2P35606 906 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 SEMA3FQ13275 785 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 PPP2R5CQ13362 524 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 SLC18A3Q16572 532 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 LRRC31Q6UY01 552 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 ACBD3Q9H3P7 528 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 GOLGA6CA6NDK9 693 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 CEP104O60308 925 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 GOLGA6DP0CG33 693 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 TCP1P17987 556 aaKnown RBP13.54□□□□□ -0.24
PHF3-205ENST00000494284 HMGCS2P54868 508 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 MKRN4PQ13434 485 aaPredicted RBP13.54□□□□□ -0.24
PHF3-205ENST00000494284 PADI6Q6TGC4 694 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 ZNF720Q7Z2F6 126 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 MIER3Q7Z3K6 550 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 FAM186BQ8IYM0 893 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 SYTL5Q8TDW5 730 aaPredicted RBP13.54□□□□□ -0.24
PHF3-205ENST00000494284 TYW1Q9NV66 732 aaKnown RBP13.54□□□□□ -0.24
PHF3-205ENST00000494284 GOLGA6AQ9NYA3 693 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 FAM184BQ9ULE4 1060 aa13.54□□□□□ -0.24
PHF3-205ENST00000494284 GRID2IPA4D2P6 1211 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 K7ENM7 598 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 CCNE2O96020 404 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 ICAM1P05362 532 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 HLTFQ14527 1009 aaKnown RBP eCLIP13.53□□□□□ -0.246e-10■□□□□ 10.6
PHF3-205ENST00000494284 EDRF1Q3B7T1 1238 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 TKFCQ3LXA3 575 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 SYCP3Q8IZU3 236 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 SLC16A10Q8TF71 515 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 KAT5Q92993 513 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 ZBED3Q96IU2 234 aaPredicted RBP13.53□□□□□ -0.24
PHF3-205ENST00000494284 POP1Q99575 1024 aaKnown RBP13.53□□□□□ -0.24
PHF3-205ENST00000494284 TEKT3Q9BXF9 490 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 TRIM31Q9BZY9 425 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 R3HDMLQ9H3Y0 253 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 TAS2R14Q9NYV8 317 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 FEM1BQ9UK73 627 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 ARHGEF35A5YM69 484 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 PDXKO00764 312 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 BACH1O14867 736 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 CFAP221Q4G0U5 840 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 AENQ8WTP8 325 aaKnown RBP13.53□□□□□ -0.24
PHF3-205ENST00000494284 U2AF1L4Q8WU68 220 aaKnown RBP13.53□□□□□ -0.24
PHF3-205ENST00000494284 CNKSR2Q8WXI2 1034 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 AGPAT3Q9NRZ7 376 aa13.53□□□□□ -0.24
PHF3-205ENST00000494284 CNOT7Q9UIV1 285 aaKnown RBP13.53□□□□□ -0.24
PHF3-205ENST00000494284 SLC16A4O15374 487 aa13.52□□□□□ -0.24
PHF3-205ENST00000494284 LCA5LO95447 670 aa13.52□□□□□ -0.24
PHF3-205ENST00000494284 PRPF4BQ13523 1007 aaKnown RBP13.52□□□□□ -0.24
PHF3-205ENST00000494284 MTMR1Q13613 665 aa13.52□□□□□ -0.24
PHF3-205ENST00000494284 DALRD3Q5D0E6 543 aaKnown RBP13.52□□□□□ -0.24
PHF3-205ENST00000494284 NLGN2Q8NFZ4 835 aa13.52□□□□□ -0.24
PHF3-205ENST00000494284 OR2W6PQ8NHA6 318 aa13.52□□□□□ -0.24
PHF3-205ENST00000494284 GOLGA5Q8TBA6 731 aa13.52□□□□□ -0.24
PHF3-205ENST00000494284 CCDC43Q96MW1 224 aaKnown RBP13.52□□□□□ -0.24
PHF3-205ENST00000494284 OSGEPQ9NPF4 335 aa13.52□□□□□ -0.24
PHF3-205ENST00000494284 MED4Q9NPJ6 270 aa13.52□□□□□ -0.24
PHF3-205ENST00000494284 ZNF541Q9H0D2 1346 aa13.52□□□□□ -0.25
PHF3-205ENST00000494284 TARSL2A2RTX5 802 aaKnown RBP13.52□□□□□ -0.25
PHF3-205ENST00000494284 VGLL3A8MV65 326 aa13.52□□□□□ -0.25
PHF3-205ENST00000494284 CALUO43852 315 aaPredicted RBP13.52□□□□□ -0.25
PHF3-205ENST00000494284 ZEB2O60315 1214 aa13.52□□□□□ -0.25
PHF3-205ENST00000494284 EPB41P11171 864 aaKnown RBP13.52□□□□□ -0.25
PHF3-205ENST00000494284 MARSP56192 900 aaKnown RBP13.52□□□□□ -0.25
PHF3-205ENST00000494284 BAATQ14032 418 aaPredicted RBP13.52□□□□□ -0.25
PHF3-205ENST00000494284 NAB2Q15742 525 aa13.52□□□□□ -0.25
PHF3-205ENST00000494284 ALKBH5Q6P6C2 394 aaKnown RBP13.52□□□□□ -0.25
PHF3-205ENST00000494284 ZNF662Q6ZS27 426 aa13.52□□□□□ -0.25
PHF3-205ENST00000494284 GLYCTKQ8IVS8 523 aa13.52□□□□□ -0.25
PHF3-205ENST00000494284 ZC3H3Q8IXZ2 948 aaKnown RBP13.52□□□□□ -0.25
PHF3-205ENST00000494284 PRPF38AQ8NAV1 312 aaKnown RBP13.52□□□□□ -0.25
PHF3-205ENST00000494284 TRPM4Q8TD43 1214 aa13.52□□□□□ -0.25
PHF3-205ENST00000494284 PLEKHO2Q8TD55 490 aa13.52□□□□□ -0.25
PHF3-205ENST00000494284 BORCS6Q96GS4 357 aa13.52□□□□□ -0.25
PHF3-205ENST00000494284 RPGRIP1Q96KN7 1286 aa13.52□□□□□ -0.25
PHF3-205ENST00000494284 RUFY1Q96T51 708 aa13.52□□□□□ -0.25
PHF3-205ENST00000494284 DDX47Q9H0S4 455 aaKnown RBP13.52□□□□□ -0.25
PHF3-205ENST00000494284 ATAD5Q96QE3 1844 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 COL2A1P02458 1487 aaPredicted RBP13.51□□□□□ -0.25
PHF3-205ENST00000494284 SSU72P8A0A1W2PR75 194 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 HSD17B4P51659 736 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 TUBB4BP68371 445 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 ANGEL2Q5VTE6 544 aaKnown RBP13.51□□□□□ -0.25
PHF3-205ENST00000494284 TAF3Q5VWG9 929 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 ZNF746Q6NUN9 644 aaPredicted RBP13.51□□□□□ -0.25
PHF3-205ENST00000494284 AGBL3Q8NEM8 1001 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 SAAL1Q96ER3 474 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 WRNIP1Q96S55 665 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms