RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 MAGEB2O15479 319 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 MYCNP04198 464 aaPredicted RBP12.6□□□□□ -0.39
MCF2L-231ENST00000494043 CCL5P13501 91 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 ERCC5P28715 1186 aaPredicted RBP12.6□□□□□ -0.39
MCF2L-231ENST00000494043 ARL2P36404 184 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 PPP1R2P41236 205 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 PRCPP42785 496 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 ZNF165P49910 485 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 CASP5P51878 434 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 CHMP4BP1P59074 171 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 DMP1Q13316 513 aaPredicted RBP12.6□□□□□ -0.39
MCF2L-231ENST00000494043 STIM1Q13586 685 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 MTFR1Q15390 333 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 MTHFD1LQ6UB35 978 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 FAM178BQ8IXR5 827 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 LINC01465Q8N7H1 131 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 RETREG2Q8NC44 543 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 GLIS3Q8NEA6 775 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 LMBR1Q8WVP7 490 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 TCP11Q8WWU5 503 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 BSNDQ8WZ55 320 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 TMEM143Q96AN5 459 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 BPIFA3Q9BQP9 254 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 TSEN34Q9BSV6 310 aaKnown RBP12.6□□□□□ -0.39
MCF2L-231ENST00000494043 MRPL44Q9H9J2 332 aaKnown RBP12.6□□□□□ -0.39
MCF2L-231ENST00000494043 C17orf75Q9HAS0 396 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 SCN10AQ9Y5Y9 1956 aa12.6□□□□□ -0.39
MCF2L-231ENST00000494043 MOXD2PA6NHM9 499 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 PSMA7O14818 248 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 EIF3DO15371 548 aaKnown RBP eCLIP12.59□□□□□ -0.39
MCF2L-231ENST00000494043 CABYRO75952 493 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 GCNT3O95395 438 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 MYBP10242 640 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 MAPTP10636 758 aaKnown RBP12.59□□□□□ -0.39
MCF2L-231ENST00000494043 KLRC1P26715 233 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 NMT1P30419 496 aaKnown RBP12.59□□□□□ -0.39
MCF2L-231ENST00000494043 HOXC8P31273 242 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 ACLYP53396 1101 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 NCKAP1LP55160 1127 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 PEX3P56589 373 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 PAK1Q13153 545 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 MKRN4PQ13434 485 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-231ENST00000494043 DRP2Q13474 957 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 GSE1Q14687 1217 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 MARCH8Q5T0T0 291 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 IER5Q5VY09 327 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 KLHL10Q6JEL2 608 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 EFCAB12Q6NXP0 572 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 EPM2AIP1Q7L775 607 aaPredicted RBP12.59□□□□□ -0.39
MCF2L-231ENST00000494043 MYOCDQ8IZQ8 938 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 GUF1Q8N442 669 aaKnown RBP12.59□□□□□ -0.39
MCF2L-231ENST00000494043 LRRC71Q8N4P6 559 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 C7orf31Q8N865 590 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 ARRDC4Q8NCT1 418 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 SLC17A8Q8NDX2 589 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 ASAP3Q8TDY4 903 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 SCFD1Q8WVM8 642 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 SPIRE2Q8WWL2 714 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 ARMC5Q96C12 935 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 ZBTB10Q96DT7 871 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 ZNF333Q96JL9 665 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 IFT74Q96LB3 600 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 RNF208Q9H0X6 261 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 RBSNQ9H1K0 784 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 SUGCTQ9HAC7 445 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 CBX8Q9HC52 389 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 SETD4Q9NVD3 440 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 CTNND2Q9UQB3 1225 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 MAPK8IP1Q9UQF2 711 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 UBE4BO95155 1302 aa12.59□□□□□ -0.39
MCF2L-231ENST00000494043 FSD2A1L4K1 749 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 C17orf102A2RUQ5 167 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 MBLAC1A4D2B0 266 aaPredicted RBP12.58□□□□□ -0.4
MCF2L-231ENST00000494043 K7ENM7 598 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 PPP1R37O75864 691 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 KIF20AO95235 890 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 MYCP01106 439 aaPredicted RBP12.58□□□□□ -0.4
MCF2L-231ENST00000494043 GLRA2P23416 452 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 NAMPTP43490 491 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 NPTX2P47972 431 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 DNM2P50570 870 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 CLCN3P51790 818 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 SMTNP53814 917 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 ADAM17P78536 824 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 ALCAMQ13740 583 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 IQCB1Q15051 598 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 PPP2R5AQ15172 486 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 BMT2Q1RMZ1 405 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 NBPF20Q3BBV1 942 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 NFRKBQ6P4R8 1299 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 STXBP4Q6ZWJ1 553 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 ZNF720Q7Z2F6 126 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 AOPEPQ8N6M6 819 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 METTL13Q8N6R0 699 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 RNF214Q8ND24 703 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 PPP1R13LQ8WUF5 828 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 PRPF31Q8WWY3 499 aaKnown RBP12.58□□□□□ -0.4
MCF2L-231ENST00000494043 NELFBQ8WX92 580 aa12.58□□□□□ -0.4
MCF2L-231ENST00000494043 PSPC1Q8WXF1 523 aaKnown RBP12.58□□□□□ -0.4
MCF2L-231ENST00000494043 DHTKD1Q96HY7 919 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms