RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 FBXO47Q5MNV8 452 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 TMEM240Q5SV17 173 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 CNKSR3Q6P9H4 555 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 PADI6Q6TGC4 694 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 TSHZ1Q6ZSZ6 1077 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 USP49Q70CQ1 688 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 MAEAQ7L5Y9 396 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 OTOP2Q7RTS6 562 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 KCNK18Q7Z418 384 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 RHPN2Q8IUC4 686 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 NLRP7Q8WX94 980 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 PSPC1Q8WXF1 523 aaKnown RBP11.25□□□□□ -0.61
RFC2-211ENST00000494019 VWCEQ96DN2 955 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 SPATA32Q96LK8 384 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 NLRP4Q96MN2 994 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 IFIH1Q9BYX4 1025 aaKnown RBP11.25□□□□□ -0.61
RFC2-211ENST00000494019 CCSER1Q9C0I3 900 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 MTIF3Q9H2K0 278 aaKnown RBP11.25□□□□□ -0.61
RFC2-211ENST00000494019 SUCLA2Q9P2R7 463 aaPredicted RBP11.25□□□□□ -0.61
RFC2-211ENST00000494019 RBM19Q9Y4C8 960 aaKnown RBP11.25□□□□□ -0.61
RFC2-211ENST00000494019 COL4A3BPQ9Y5P4 624 aa11.25□□□□□ -0.61
RFC2-211ENST00000494019 KIAA1671Q9BY89 1806 aa11.24□□□□□ -0.61
RFC2-211ENST00000494019 A0A1W2PPC1 479 aa11.24□□□□□ -0.61
RFC2-211ENST00000494019 CUTAO60888 179 aa11.24□□□□□ -0.61
RFC2-211ENST00000494019 GPR32O75388 356 aa11.24□□□□□ -0.61
RFC2-211ENST00000494019 SSBP05455 408 aaKnown RBP eCLIP11.24□□□□□ -0.61
RFC2-211ENST00000494019 PLCG1P19174 1290 aa11.24□□□□□ -0.61
RFC2-211ENST00000494019 CRYBB1P53674 252 aaPredicted RBP11.24□□□□□ -0.61
RFC2-211ENST00000494019 PAK2Q13177 524 aa11.24□□□□□ -0.61
RFC2-211ENST00000494019 PLEKHG4Q58EX7 1191 aa11.24□□□□□ -0.61
RFC2-211ENST00000494019 MCPH1Q8NEM0 835 aa11.24□□□□□ -0.61
RFC2-211ENST00000494019 DBF4BQ8NFT6 615 aa11.24□□□□□ -0.61
RFC2-211ENST00000494019 TMEM40Q8WWA1 233 aa11.24□□□□□ -0.61
RFC2-211ENST00000494019 SEPT8Q92599 483 aa11.24□□□□□ -0.61
RFC2-211ENST00000494019 APBB2Q92870 758 aa11.24□□□□□ -0.61
RFC2-211ENST00000494019 POLR3FQ9H1D9 316 aaPredicted RBP11.24□□□□□ -0.61
RFC2-211ENST00000494019 CDHR5Q9HBB8 845 aa11.24□□□□□ -0.61
RFC2-211ENST00000494019 CCDC39Q9UFE4 941 aa11.24□□□□□ -0.61
RFC2-211ENST00000494019 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
RFC2-211ENST00000494019 FNDC1Q4ZHG4 1894 aaPredicted RBP11.23□□□□□ -0.61
RFC2-211ENST00000494019 A0A087WZ62 844 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 RPS6KA5O75582 802 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 BAIAP3O94812 1187 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 CD52P31358 61 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 NFX1Q12986 1120 aaKnown RBP11.23□□□□□ -0.61
RFC2-211ENST00000494019 IKBKEQ14164 716 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 TCTN1Q2MV58 587 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 FAM102BQ5T8I3 360 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 ZNF410Q86VK4 478 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 KSR1Q8IVT5 923 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 ZNF710Q8N1W2 664 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 KCTD17Q8N5Z5 321 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 USP38Q8NB14 1042 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 LEO1Q8WVC0 666 aaPredicted RBP11.23□□□□□ -0.61
RFC2-211ENST00000494019 PRPF31Q8WWY3 499 aaKnown RBP11.23□□□□□ -0.61
RFC2-211ENST00000494019 HERVK_113Q902F9 699 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 LARP4BQ92615 738 aaKnown RBP11.23□□□□□ -0.61
RFC2-211ENST00000494019 FDXACB1Q9BRP7 624 aaPredicted RBP11.23□□□□□ -0.61
RFC2-211ENST00000494019 RUSC1Q9BVN2 902 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 ADAMTS10Q9H324 1103 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 AGO3Q9H9G7 860 aaKnown RBP11.23□□□□□ -0.61
RFC2-211ENST00000494019 GPRC5CQ9NQ84 441 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 CXXC1Q9P0U4 656 aaPredicted RBP11.23□□□□□ -0.61
RFC2-211ENST00000494019 PCDHA7Q9UN72 937 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 SQORQ9Y6N5 450 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 TTC3P53804 2025 aa11.23□□□□□ -0.61
RFC2-211ENST00000494019 PLA2G4BP0C869 781 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 CYP11B2P19099 503 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 EIF4BP23588 611 aaKnown RBP11.22□□□□□ -0.61
RFC2-211ENST00000494019 KCNJ6P48051 423 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 SLC12A3P55017 1021 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 CDC42EP1Q00587 391 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 LAMTOR4Q0VGL1 99 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 CAPSQ13938 189 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 TFDP1Q14186 410 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 DHX8Q14562 1220 aaKnown RBP11.22□□□□□ -0.61
RFC2-211ENST00000494019 MXD4Q14582 209 aaPredicted RBP11.22□□□□□ -0.61
RFC2-211ENST00000494019 RALGAPA2Q2PPJ7 1873 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 ODR4Q5SWX8 454 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 AXDND1Q5T1B0 1012 aaPredicted RBP11.22□□□□□ -0.61
RFC2-211ENST00000494019 RINT1Q6NUQ1 792 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 SHC4Q6S5L8 630 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 FAM228AQ86W67 206 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 PDILTQ8N807 584 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 SYT2Q8N9I0 419 aaPredicted RBP11.22□□□□□ -0.61
RFC2-211ENST00000494019 RNF149Q8NC42 400 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 ASAP3Q8TDY4 903 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 LRRC15Q8TF66 581 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 RAD54LQ92698 747 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 GCOM2Q9BZD3 368 aaPredicted RBP11.22□□□□□ -0.61
RFC2-211ENST00000494019 SCAND2PQ9GZW5 306 aaPredicted RBP11.22□□□□□ -0.61
RFC2-211ENST00000494019 GDPD2Q9HCC8 539 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 BLOC1S4Q9NUP1 217 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 CHMP5Q9NZZ3 219 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 STK17AQ9UEE5 414 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 RCOR1Q9UKL0 485 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 PADI3Q9ULW8 664 aa11.22□□□□□ -0.61
RFC2-211ENST00000494019 NOC2LQ9Y3T9 749 aaKnown RBP11.22□□□□□ -0.61
RFC2-211ENST00000494019 TDRD15B5MCY1 1934 aaKnown RBP11.21□□□□□ -0.61
RFC2-211ENST00000494019 A0A087X0B3 334 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms