RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 RILPL1Q5EBL4 403 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 KRI1Q8N9T8 703 aaKnown RBP11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 SMRP1Q8NCR6 262 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 MSANTD4Q8NCY6 345 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 SCFD2Q8WU76 684 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 STAG1Q8WVM7 1258 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 KAT2BQ92831 832 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 ERCC4Q92889 916 aaPredicted RBP11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 CEP95Q96GE4 821 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 GMCL1Q96IK5 515 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 YME1L1Q96TA2 773 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 LRRC2Q9BYS8 371 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 NCOA5Q9HCD5 579 aaKnown RBP11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 MTMR4Q9NYA4 1195 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 ARPP21Q9UBL0 812 aaPredicted RBP11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 RAB21Q9UL25 225 aa11.79□□□□□ -0.52
PDLIM1-205ENST00000493949 GSG1L2A8MUP6 293 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 LINC01565O15544 149 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 TTLL1O95922 423 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 EDNRBP24530 442 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 METAP2P50579 478 aaKnown RBP eCLIP11.78□□□□□ -0.526e-8■□□□□ 10.7
PDLIM1-205ENST00000493949 COASYQ13057 564 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 GNL2Q13823 731 aaKnown RBP11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 UBE3CQ15386 1083 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 PLEKHG4Q58EX7 1191 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 ZNF618Q5T7W0 954 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 SLFN13Q68D06 897 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 MCTP2Q6DN12 878 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 NSMFQ6X4W1 530 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 SRGAP1Q7Z6B7 1085 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 ADSSL1Q8N142 457 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 CNNM3Q8NE01 707 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 DBF4BQ8NFT6 615 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 RUBCNQ92622 972 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 COPS5Q92905 334 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 NKD2Q969F2 451 aaPredicted RBP11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 SMARCE1Q969G3 411 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 RIPOR3Q96MK2 946 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 MAP3K14Q99558 947 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 ALG1Q9BT22 464 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 CARD6Q9BX69 1037 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 FOXP1Q9H334 677 aaPredicted RBP11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 MKNK2Q9HBH9 465 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 EPB41L4AQ9HCS5 686 aaPredicted RBP11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 KCNH3Q9ULD8 1083 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 ZFHX4Q86UP3 3567 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 KIAA1671Q9BY89 1806 aa11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 MAP1BP46821 2468 aaKnown RBP11.78□□□□□ -0.52
PDLIM1-205ENST00000493949 CCDC196A0A1B0GTZ2 297 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 M0R2C6 588 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 SH2B2O14492 632 aaPredicted RBP11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 MAP2K7O14733 419 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 GRM6O15303 877 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 KIF5CO60282 957 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 MMP3P08254 477 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 BMPR1AP36894 532 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 SARSP49591 514 aaKnown RBP11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 SPAG1Q07617 926 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 BAATQ14032 418 aaPredicted RBP11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 SMC1AQ14683 1233 aaKnown RBP11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 PTPN21Q16825 1174 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 WHAMMP3Q1A5X7 153 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 HDXQ7Z353 690 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 CNGA4Q8IV77 575 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 TMTC2Q8N394 836 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 SPATA20Q8TB22 786 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 SPOCK2Q92563 424 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 WNT8BQ93098 351 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 RPGRIP1Q96KN7 1286 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 STRBPQ96SI9 672 aaKnown RBP11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 C11orf84Q9BUA3 381 aaPredicted RBP11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 PHF7Q9BWX1 381 aaPredicted RBP11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 VIPAS39Q9H9C1 493 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 MED4Q9NPJ6 270 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 CLEC1BQ9P126 229 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 NAP1L2Q9ULW6 460 aaPredicted RBP11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 RWDD3Q9Y3V2 267 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 PLIN4Q96Q06 1357 aa11.77□□□□□ -0.53
PDLIM1-205ENST00000493949 TTC3P53804 2025 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 A0A1B0GTH6 734 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 FGAP02671 866 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 MMP1P03956 469 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 TXNP10599 105 aaKnown RBP11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 ATF7P17544 494 aaPredicted RBP11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 OAS2P29728 719 aaKnown RBP11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 CTNNB1P35222 781 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 NT5C2P49902 561 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 GNG11P61952 73 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 GUCY1B3Q02153 619 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 MORC3Q14149 939 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 POSTNQ15063 836 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 FILIP1LQ4L180 1135 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 APOA5Q6Q788 366 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 SHC4Q6S5L8 630 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 KCTD1Q719H9 257 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 GOLGA6L1Q8N7Z2 621 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 TC2NQ8N9U0 490 aa11.76□□□□□ -0.53
PDLIM1-205ENST00000493949 CLP1Q92989 425 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms