RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 SAMD11Q96NU1 681 aa25.29■■□□□ 1.64
SNIP1-203ENST00000493916 RGS18Q9NS28 235 aa25.29■■□□□ 1.64
SNIP1-203ENST00000493916 PRUNE2Q8WUY3 3088 aa25.29■■□□□ 1.64
SNIP1-203ENST00000493916 ADGRA3Q8IWK6 1321 aa25.29■■□□□ 1.64
SNIP1-203ENST00000493916 UNC80Q8N2C7 3258 aa25.28■■□□□ 1.64
SNIP1-203ENST00000493916 DENND3A2RUS2 1198 aa25.28■■□□□ 1.64
SNIP1-203ENST00000493916 H3BQV1 296 aa25.28■■□□□ 1.64
SNIP1-203ENST00000493916 RFXAPO00287 272 aa25.28■■□□□ 1.64
SNIP1-203ENST00000493916 DGKIO75912 1065 aa25.28■■□□□ 1.64
SNIP1-203ENST00000493916 STAG3L1P0CL83 205 aa25.28■■□□□ 1.64
SNIP1-203ENST00000493916 TECP42680 631 aa25.28■■□□□ 1.64
SNIP1-203ENST00000493916 DSC3Q14574 896 aa25.28■■□□□ 1.64
SNIP1-203ENST00000493916 NBR1Q14596 966 aa25.28■■□□□ 1.64
SNIP1-203ENST00000493916 ZNF410Q86VK4 478 aa25.28■■□□□ 1.64
SNIP1-203ENST00000493916 ADAM2Q99965 735 aa25.28■■□□□ 1.64
SNIP1-203ENST00000493916 ANKEF1Q9NU02 776 aa25.28■■□□□ 1.64
SNIP1-203ENST00000493916 RNF216Q9NWF9 866 aaPredicted RBP25.28■■□□□ 1.64
SNIP1-203ENST00000493916 ZBTB39O15060 712 aa25.27■■□□□ 1.64
SNIP1-203ENST00000493916 LPXNO60711 386 aa25.27■■□□□ 1.64
SNIP1-203ENST00000493916 GRB10Q13322 594 aa25.27■■□□□ 1.64
SNIP1-203ENST00000493916 EMC2Q15006 297 aa25.27■■□□□ 1.64
SNIP1-203ENST00000493916 XKR9Q5GH70 373 aa25.27■■□□□ 1.64
SNIP1-203ENST00000493916 MCTP1Q6DN14 999 aa25.27■■□□□ 1.64
SNIP1-203ENST00000493916 SLC24A5Q71RS6 500 aa25.27■■□□□ 1.64
SNIP1-203ENST00000493916 RHPN2Q8IUC4 686 aa25.27■■□□□ 1.64
SNIP1-203ENST00000493916 ZNF668Q96K58 619 aaPredicted RBP25.27■■□□□ 1.64
SNIP1-203ENST00000493916 C17orf80Q9BSJ5 609 aa25.27■■□□□ 1.64
SNIP1-203ENST00000493916 GCOM2Q9BZD3 368 aaPredicted RBP25.27■■□□□ 1.64
SNIP1-203ENST00000493916 TUFT1Q9NNX1 390 aa25.27■■□□□ 1.64
SNIP1-203ENST00000493916 MTUS1Q9ULD2 1270 aa25.27■■□□□ 1.64
SNIP1-203ENST00000493916 PCDHB6Q9Y5E3 794 aa25.27■■□□□ 1.64
SNIP1-203ENST00000493916 C9IYK1 514 aa25.26■■□□□ 1.63
SNIP1-203ENST00000493916 GTPBP6O43824 516 aaPredicted RBP25.26■■□□□ 1.63
SNIP1-203ENST00000493916 SPATA31C1P0DKV0 1188 aa25.26■■□□□ 1.63
SNIP1-203ENST00000493916 FXR2P51116 673 aaKnown RBP eCLIP25.26■■□□□ 1.63
SNIP1-203ENST00000493916 RILPL1Q5EBL4 403 aa25.26■■□□□ 1.63
SNIP1-203ENST00000493916 FIBCD1Q8N539 461 aa25.26■■□□□ 1.63
SNIP1-203ENST00000493916 SLC17A8Q8NDX2 589 aa25.26■■□□□ 1.63
SNIP1-203ENST00000493916 ERMNQ8TAM6 284 aa25.26■■□□□ 1.63
SNIP1-203ENST00000493916 POLR3CQ9BUI4 534 aaPredicted RBP25.26■■□□□ 1.63
SNIP1-203ENST00000493916 MTCH2Q9Y6C9 303 aa25.26■■□□□ 1.63
SNIP1-203ENST00000493916 RALGAPA2Q2PPJ7 1873 aa25.26■■□□□ 1.63
SNIP1-203ENST00000493916 LAD1O00515 517 aa25.25■■□□□ 1.63
SNIP1-203ENST00000493916 XRCC6P12956 609 aaKnown RBP eCLIP25.25■■□□□ 1.63
SNIP1-203ENST00000493916 CMTR2Q8IYT2 770 aaKnown RBP25.25■■□□□ 1.63
SNIP1-203ENST00000493916 FBXO22Q8NEZ5 403 aa25.25■■□□□ 1.63
SNIP1-203ENST00000493916 GDPD5Q8WTR4 605 aa25.25■■□□□ 1.63
SNIP1-203ENST00000493916 TCP11Q8WWU5 503 aa25.25■■□□□ 1.63
SNIP1-203ENST00000493916 PSPC1Q8WXF1 523 aaKnown RBP25.25■■□□□ 1.63
SNIP1-203ENST00000493916 LRFN2Q9ULH4 789 aa25.25■■□□□ 1.63
SNIP1-203ENST00000493916 COL4A3BPQ9Y5P4 624 aa25.25■■□□□ 1.63
SNIP1-203ENST00000493916 REV3LO60673 3130 aa25.25■■□□□ 1.63
SNIP1-203ENST00000493916 A0A087WZ62 844 aa25.24■■□□□ 1.63
SNIP1-203ENST00000493916 MED24O75448 989 aa25.24■■□□□ 1.63
SNIP1-203ENST00000493916 LINC00271P0C7V0 271 aa25.24■■□□□ 1.63
SNIP1-203ENST00000493916 RARRES1P49788 294 aa25.24■■□□□ 1.63
SNIP1-203ENST00000493916 FAM189BP81408 668 aa25.24■■□□□ 1.63
SNIP1-203ENST00000493916 PTGDRQ13258 359 aa25.24■■□□□ 1.63
SNIP1-203ENST00000493916 EPC2Q52LR7 807 aa25.24■■□□□ 1.63
SNIP1-203ENST00000493916 LARP1BQ659C4 914 aaKnown RBP25.24■■□□□ 1.63
SNIP1-203ENST00000493916 CATSPER3Q86XQ3 398 aa25.24■■□□□ 1.63
SNIP1-203ENST00000493916 CLP1Q92989 425 aaKnown RBP25.24■■□□□ 1.63
SNIP1-203ENST00000493916 TMEM143Q96AN5 459 aa25.24■■□□□ 1.63
SNIP1-203ENST00000493916 MTRQ99707 1265 aa25.24■■□□□ 1.63
SNIP1-203ENST00000493916 FDXACB1Q9BRP7 624 aaPredicted RBP25.24■■□□□ 1.63
SNIP1-203ENST00000493916 INO80BQ9C086 356 aaPredicted RBP25.24■■□□□ 1.63
SNIP1-203ENST00000493916 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.24■■□□□ 1.63
SNIP1-203ENST00000493916 LMCD1Q9NZU5 365 aa25.24■■□□□ 1.63
SNIP1-203ENST00000493916 RWDD3Q9Y3V2 267 aa25.24■■□□□ 1.63
SNIP1-203ENST00000493916 DGAT1O75907 488 aa25.23■■□□□ 1.63
SNIP1-203ENST00000493916 SFPQP23246 707 aaKnown RBP eCLIP25.23■■□□□ 1.63
SNIP1-203ENST00000493916 RPA1P27694 616 aa25.23■■□□□ 1.63
SNIP1-203ENST00000493916 BTG3Q14201 252 aaPredicted RBP25.23■■□□□ 1.63
SNIP1-203ENST00000493916 HAUS3Q68CZ6 603 aa25.23■■□□□ 1.63
SNIP1-203ENST00000493916 KSR1Q8IVT5 923 aa25.23■■□□□ 1.63
SNIP1-203ENST00000493916 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.23■■□□□ 1.63
SNIP1-203ENST00000493916 TMEM192Q8IY95 271 aa25.23■■□□□ 1.63
SNIP1-203ENST00000493916 PRPF31Q8WWY3 499 aaKnown RBP25.23■■□□□ 1.63
SNIP1-203ENST00000493916 NLRP4Q96MN2 994 aa25.23■■□□□ 1.63
SNIP1-203ENST00000493916 ELAC1Q9H777 363 aaKnown RBP25.23■■□□□ 1.63
SNIP1-203ENST00000493916 ATP6V0A4Q9HBG4 840 aa25.23■■□□□ 1.63
SNIP1-203ENST00000493916 XPNPEP1Q9NQW7 623 aa25.23■■□□□ 1.63
SNIP1-203ENST00000493916 PCDHB7Q9Y5E2 793 aa25.23■■□□□ 1.63
SNIP1-203ENST00000493916 NLRC5Q86WI3 1866 aa25.22■■□□□ 1.63
SNIP1-203ENST00000493916 ASAP2O43150 1006 aa25.22■■□□□ 1.63
SNIP1-203ENST00000493916 ZSCAN20P17040 1043 aaPredicted RBP25.22■■□□□ 1.63
SNIP1-203ENST00000493916 MUTP22033 750 aa25.22■■□□□ 1.63
SNIP1-203ENST00000493916 PRPHP41219 470 aa25.22■■□□□ 1.63
SNIP1-203ENST00000493916 LAMTOR4Q0VGL1 99 aa25.22■■□□□ 1.63
SNIP1-203ENST00000493916 PDIA5Q14554 519 aa25.22■■□□□ 1.63
SNIP1-203ENST00000493916 PIGOQ8TEQ8 1089 aa25.22■■□□□ 1.63
SNIP1-203ENST00000493916 CCDC43Q96MW1 224 aaKnown RBP25.22■■□□□ 1.63
SNIP1-203ENST00000493916 IFT122Q9HBG6 1241 aa25.22■■□□□ 1.63
SNIP1-203ENST00000493916 BMP2KQ9NSY1 1161 aaPredicted RBP25.22■■□□□ 1.63
SNIP1-203ENST00000493916 TMEM161AQ9NX61 479 aa25.22■■□□□ 1.63
SNIP1-203ENST00000493916 DBR1Q9UK59 544 aaKnown RBP25.22■■□□□ 1.63
SNIP1-203ENST00000493916 C5orf67F2Z3F1 127 aa25.21■■□□□ 1.63
SNIP1-203ENST00000493916 CSDE1O75534 798 aaKnown RBP25.21■■□□□ 1.63
SNIP1-203ENST00000493916 FGFR4P22455 802 aa25.21■■□□□ 1.63
SNIP1-203ENST00000493916 FERMT3Q86UX7 667 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms