RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 PRPF31Q8WWY3 499 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 LARP4BQ92615 738 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 JPH2Q9BR39 696 aaPredicted RBP19.87■□□□□ 0.77
PDLIM7-208ENST00000493815 GADD45BO75293 160 aaPredicted RBP19.86■□□□□ 0.77
PDLIM7-208ENST00000493815 NDUFA8P51970 172 aa19.86■□□□□ 0.77
PDLIM7-208ENST00000493815 CACNB1Q02641 598 aaPredicted RBP19.86■□□□□ 0.77
PDLIM7-208ENST00000493815 E2F4Q16254 413 aa19.86■□□□□ 0.77
PDLIM7-208ENST00000493815 ARSHQ5FYA8 562 aa19.86■□□□□ 0.77
PDLIM7-208ENST00000493815 IER5Q5VY09 327 aa19.86■□□□□ 0.77
PDLIM7-208ENST00000493815 C1orf186Q6ZWK4 172 aa19.86■□□□□ 0.77
PDLIM7-208ENST00000493815 GPBP1Q86WP2 473 aa19.86■□□□□ 0.77
PDLIM7-208ENST00000493815 NME8Q8N427 588 aa19.86■□□□□ 0.77
PDLIM7-208ENST00000493815 STAMQ92783 540 aa19.86■□□□□ 0.77
PDLIM7-208ENST00000493815 POLR3FQ9H1D9 316 aaPredicted RBP19.86■□□□□ 0.77
PDLIM7-208ENST00000493815 RANBP2P49792 3224 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-208ENST00000493815 A0A1W2PQ27 194 aa19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 A0A1W2PQ64 194 aa19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 A0A1W2PQD8 194 aa19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 GOLGA6L4A6NEF3 574 aa19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 NBNO60934 754 aa19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 GPR32O75388 356 aa19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 MAGEA10P43363 369 aaPredicted RBP19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 EXOC8Q8IYI6 725 aa19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 KCTD17Q8N5Z5 321 aa19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 ASAP3Q8TDY4 903 aa19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 PSPC1Q8WXF1 523 aaKnown RBP19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 NLRP4Q96MN2 994 aa19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 OSMRQ99650 979 aa19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 LBHD1Q9BQE6 289 aaPredicted RBP19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 CELF4Q9BZC1 486 aaKnown RBP19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 STK17AQ9UEE5 414 aa19.85■□□□□ 0.77
PDLIM7-208ENST00000493815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 M0QZ92 97 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 CAND2O75155 1236 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 CSDE1O75534 798 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 SRGAP2CP0DJJ0 459 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 ACRP10323 421 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 GHRP10912 638 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 GPC3P51654 580 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 EPHB4P54760 987 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 LAMTOR4Q0VGL1 99 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 FAM26DQ5JW98 314 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 TMEM199Q8N511 208 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 MCPH1Q8NEM0 835 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 TMEM40Q8WWA1 233 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 TCP11Q8WWU5 503 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 NLRP7Q8WX94 980 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 MRPS27Q92552 414 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 VWCEQ96DN2 955 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 SCLT1Q96NL6 688 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 ADAMTS10Q9H324 1103 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 HPSEQ9Y251 543 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 COL4A3BPQ9Y5P4 624 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 TRPV2Q9Y5S1 764 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 SFI1A8K8P3 1242 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 GAS2O43903 313 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 HIP1RO75146 1068 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 ARL2P36404 184 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 IQUBQ8NA54 791 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 BSNDQ8WZ55 320 aa19.84■□□□□ 0.77
PDLIM7-208ENST00000493815 LTBP2Q14767 1821 aa19.83■□□□□ 0.77
PDLIM7-208ENST00000493815 A0A087WZ62 844 aa19.83■□□□□ 0.76
PDLIM7-208ENST00000493815 PRPF40AO75400 957 aaKnown RBP19.83■□□□□ 0.76
PDLIM7-208ENST00000493815 GLRA2P23416 452 aa19.83■□□□□ 0.76
PDLIM7-208ENST00000493815 FPGSQ05932 587 aa19.83■□□□□ 0.76
PDLIM7-208ENST00000493815 CSPP1Q1MSJ5 1256 aa19.83■□□□□ 0.76
PDLIM7-208ENST00000493815 SV2BQ7L1I2 683 aa19.83■□□□□ 0.76
PDLIM7-208ENST00000493815 DAW1Q8N136 415 aa19.83■□□□□ 0.76
PDLIM7-208ENST00000493815 FDXACB1Q9BRP7 624 aaPredicted RBP19.83■□□□□ 0.76
PDLIM7-208ENST00000493815 SERTAD1Q9UHV2 236 aa19.83■□□□□ 0.76
PDLIM7-208ENST00000493815 SCN5AQ14524 2016 aa19.82■□□□□ 0.76
PDLIM7-208ENST00000493815 RPLP2P05387 115 aaKnown RBP19.82■□□□□ 0.76
PDLIM7-208ENST00000493815 SYKP43405 635 aa19.82■□□□□ 0.76
PDLIM7-208ENST00000493815 LPIN1Q14693 890 aa19.82■□□□□ 0.76
PDLIM7-208ENST00000493815 LONRF3Q496Y0 759 aa19.82■□□□□ 0.76
PDLIM7-208ENST00000493815 FBXO47Q5MNV8 452 aa19.82■□□□□ 0.76
PDLIM7-208ENST00000493815 DYMQ7RTS9 669 aa19.82■□□□□ 0.76
PDLIM7-208ENST00000493815 RNF149Q8NC42 400 aa19.82■□□□□ 0.76
PDLIM7-208ENST00000493815 REEP2Q9BRK0 252 aa19.82■□□□□ 0.76
PDLIM7-208ENST00000493815 AGO3Q9H9G7 860 aaKnown RBP19.82■□□□□ 0.76
PDLIM7-208ENST00000493815 LAMA2P24043 3122 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 MYMKA6NI61 221 aa19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 KRT18P05783 430 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 FGFR4P22455 802 aa19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 GUCY2CP25092 1073 aa19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 CRYBB1P53674 252 aaPredicted RBP19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 MAPK7Q13164 816 aa19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 CAPSQ13938 189 aa19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 TCTN1Q2MV58 587 aa19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 CLEC17AQ6ZS10 378 aa19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 C16orf59Q7L2K0 433 aa19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 GRAMD1CQ8IYS0 662 aa19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 TMEM87AQ8NBN3 555 aa19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 FAM237AA0A1B0GTK4 181 aa19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 ACTN4O43707 911 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 MXD4Q14582 209 aaPredicted RBP19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 DDX12PQ92771 950 aa19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 KIFC3Q9BVG8 833 aa19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 IFT122Q9HBG6 1241 aa19.81■□□□□ 0.76
PDLIM7-208ENST00000493815 NOC2LQ9Y3T9 749 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms