RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 AGBL1Q96MI9 1066 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 USE1Q9NZ43 259 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 ADD3Q9UEY8 706 aaKnown RBP8.37□□□□□ -1.07
BRCA1-221ENST00000493795 RWDD2AQ9UIY3 292 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 SYNGAP1Q96PV0 1343 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 USP17L12C9JPN9 530 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 USP17L21D6R901 530 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 GRK2P25098 689 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 ZBED6P86452 979 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 HIC1Q14526 733 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 LLGL1Q15334 1064 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 CNGA3Q16281 694 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 SCARA5Q6ZMJ2 495 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 PDCD6IPQ8WUM4 868 aaKnown RBP8.37□□□□□ -1.07
BRCA1-221ENST00000493795 DCPSQ96C86 337 aaKnown RBP8.37□□□□□ -1.07
BRCA1-221ENST00000493795 ACAP3Q96P50 834 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 TGS1Q96RS0 853 aaKnown RBP8.37□□□□□ -1.07
BRCA1-221ENST00000493795 GOLPH3LQ9H4A5 285 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 ASNSD1Q9NWL6 643 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 PCDHA5Q9Y5H7 936 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 TNKSO95271 1327 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 ANGPT2O15123 496 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 CLIC2O15247 247 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 CSPG5O95196 566 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 FGGP02679 453 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 CLCN6P51797 869 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 FKBP3Q00688 224 aaKnown RBP8.37□□□□□ -1.07
BRCA1-221ENST00000493795 MFSD14BQ5SR56 506 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 THEMIS2Q5TEJ8 643 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 IFNL3Q8IZI9 196 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 PIK3R5Q8WYR1 880 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 CEP170P1Q96L14 293 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 AMNQ9BXJ7 453 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 FAM129AQ9BZQ8 928 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 SLITRK6Q9H5Y7 841 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 BABAM1Q9NWV8 329 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 AFF4Q9UHB7 1163 aaKnown RBP8.37□□□□□ -1.07
BRCA1-221ENST00000493795 PCDHA4Q9UN74 947 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 FARP1Q9Y4F1 1045 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-221ENST00000493795 PCDHA1Q9Y5I3 950 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 CLIC4Q9Y696 253 aa8.37□□□□□ -1.07
BRCA1-221ENST00000493795 GOLGA8JA6NMD2 632 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 TCP10L2B9ZVM9 353 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 LAMC2Q13753 1193 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 TRADDQ15628 312 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 Q3C1V9 767 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 SH3GL1Q99961 368 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 NDEL1Q9GZM8 345 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 NDFIP2Q9NV92 336 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 GID8Q9NWU2 228 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 ZBTB7BO15156 539 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 PCP11498 1178 aaKnown RBP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 GTF2IP78347 998 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 IRX1P78414 480 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 SLFNL1Q499Z3 407 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 ITPRIPL1Q6GPH6 555 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 CDHR1Q96JP9 859 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 DCTN4Q9UJW0 460 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 MAP3K1Q13233 1512 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 SSH2Q76I76 1423 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 MYO1CO00159 1063 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 DPYSL4O14531 572 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 GCFC2P16383 781 aaKnown RBP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 PSMD2Q13200 908 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 E4F1Q66K89 784 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 C16orf62Q7Z3J2 963 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 ARHGEF3Q9NR81 526 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 SYBUQ9NX95 663 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 TNNQ9UQP3 1299 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 SOWAHDA6NJG2 315 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 M0R3G1 203 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 ATP5JP18859 108 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 USP14P54578 494 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 HNRNPH2P55795 449 aaKnown RBP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 LRRC41Q15345 812 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 ARHGAP17Q68EM7 881 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 ZNF713Q8N859 430 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 OTUD7AQ8TE49 926 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 GRAMD1AQ96CP6 724 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 ASIC4Q96FT7 647 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 PRPF18Q99633 342 aaKnown RBP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 ETNK1Q9HBU6 452 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 SCN3BQ9NY72 215 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 YTHDC2Q9H6S0 1430 aaKnown RBP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 GMNCA6NCL1 334 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 MIF4GDA9UHW6 222 aaKnown RBP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 UBAP1LF5GYI3 381 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 hCG_1984214I3L0E3 225 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 ZNF189O75820 626 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 KIF23Q02241 960 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 CYLC2Q14093 348 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 SF3B3Q15393 1217 aaKnown RBP8.36□□□□□ -1.07
BRCA1-221ENST00000493795 ABCB5Q2M3G0 1257 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 ASPRV1Q53RT3 343 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 TAS2R42Q7RTR8 314 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 EFHBQ8N7U6 833 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 OR6B3Q8NGW1 331 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 INPP5DQ92835 1189 aa8.36□□□□□ -1.07
BRCA1-221ENST00000493795 TSSK1BQ9BXA7 367 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms