RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 PLPP4Q5VZY2 271 aa19.64■□□□□ 0.73
COL9A1-210ENST00000493682 TRIM67Q6ZTA4 783 aa19.64■□□□□ 0.73
COL9A1-210ENST00000493682 BMP8AQ7Z5Y6 402 aa19.64■□□□□ 0.73
COL9A1-210ENST00000493682 FBXL16Q8N461 479 aa19.64■□□□□ 0.73
COL9A1-210ENST00000493682 SUSD6Q92537 303 aa19.64■□□□□ 0.73
COL9A1-210ENST00000493682 RPGRIP1Q96KN7 1286 aa19.64■□□□□ 0.73
COL9A1-210ENST00000493682 DISC1Q9NRI5 854 aa19.64■□□□□ 0.73
COL9A1-210ENST00000493682 NRBP2Q9NSY0 501 aa19.64■□□□□ 0.73
COL9A1-210ENST00000493682 PUF60Q9UHX1 559 aaKnown RBP19.64■□□□□ 0.73
COL9A1-210ENST00000493682 SNX14Q9Y5W7 946 aa19.64■□□□□ 0.73
COL9A1-210ENST00000493682 PIEZO1Q92508 2521 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 TECTAO75443 2155 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 TMEM221A6NGB7 291 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 M0R296 226 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 MSH4O15457 936 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 ZSCAN20P17040 1043 aaPredicted RBP19.63■□□□□ 0.73
COL9A1-210ENST00000493682 ATF7P17544 494 aaPredicted RBP19.63■□□□□ 0.73
COL9A1-210ENST00000493682 HSPA4P34932 840 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 MRE11P49959 708 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 ZXDAP98168 799 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 PRKCEQ02156 737 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 UGCGQ16739 394 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 KCNT2Q6UVM3 1135 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 TMEM184AQ6ZMB5 413 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 ECHDC2Q86YB7 292 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 ZNF710Q8N1W2 664 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 CCDC148Q8NFR7 591 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 ZNF668Q96K58 619 aaPredicted RBP19.63■□□□□ 0.73
COL9A1-210ENST00000493682 TCF25Q9BQ70 676 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 RNF26Q9BY78 433 aaPredicted RBP19.63■□□□□ 0.73
COL9A1-210ENST00000493682 VPS54Q9P1Q0 977 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 WDFY4Q6ZS81 3184 aa19.63■□□□□ 0.73
COL9A1-210ENST00000493682 SRGAP2BP0DMP2 458 aa19.62■□□□□ 0.73
COL9A1-210ENST00000493682 DARSP14868 501 aaKnown RBP19.62■□□□□ 0.73
COL9A1-210ENST00000493682 RPS6KB1P23443 525 aa19.62■□□□□ 0.73
COL9A1-210ENST00000493682 PBX3P40426 434 aa19.62■□□□□ 0.73
COL9A1-210ENST00000493682 GPC3P51654 580 aa19.62■□□□□ 0.73
COL9A1-210ENST00000493682 ABI1Q8IZP0 508 aa19.62■□□□□ 0.73
COL9A1-210ENST00000493682 LRRC43Q8N309 656 aa19.62■□□□□ 0.73
COL9A1-210ENST00000493682 CCDC136Q96JN2 1154 aa19.62■□□□□ 0.73
COL9A1-210ENST00000493682 ZNF558Q96NG5 402 aa19.62■□□□□ 0.73
COL9A1-210ENST00000493682 RIT2Q99578 217 aa19.62■□□□□ 0.73
COL9A1-210ENST00000493682 SLC26A6Q9BXS9 759 aa19.62■□□□□ 0.73
COL9A1-210ENST00000493682 AGXT2Q9BYV1 514 aa19.62■□□□□ 0.73
COL9A1-210ENST00000493682 S1PR5Q9H228 398 aa19.62■□□□□ 0.73
COL9A1-210ENST00000493682 ENTPD7Q9NQZ7 604 aa19.62■□□□□ 0.73
COL9A1-210ENST00000493682 ZNF318Q5VUA4 2279 aa19.62■□□□□ 0.73
COL9A1-210ENST00000493682 HIDE1A8MVS5 230 aa19.61■□□□□ 0.73
COL9A1-210ENST00000493682 CHMP2AO43633 222 aa19.61■□□□□ 0.73
COL9A1-210ENST00000493682 GAS7O60861 476 aa19.61■□□□□ 0.73
COL9A1-210ENST00000493682 IFNAR1P17181 557 aa19.61■□□□□ 0.73
COL9A1-210ENST00000493682 PPM1AP35813 382 aa19.61■□□□□ 0.73
COL9A1-210ENST00000493682 TECP42680 631 aa19.61■□□□□ 0.73
COL9A1-210ENST00000493682 USP11P51784 963 aa19.61■□□□□ 0.73
COL9A1-210ENST00000493682 CLLU1OSQ5K130 101 aa19.61■□□□□ 0.73
COL9A1-210ENST00000493682 ANKRD54Q6NXT1 300 aa19.61■□□□□ 0.73
COL9A1-210ENST00000493682 RNF169Q8NCN4 708 aa19.61■□□□□ 0.73
COL9A1-210ENST00000493682 SLC5A5Q92911 643 aa19.61■□□□□ 0.73
COL9A1-210ENST00000493682 PBXIP1Q96AQ6 731 aa19.61■□□□□ 0.73
COL9A1-210ENST00000493682 UNC45AQ9H3U1 944 aa19.61■□□□□ 0.73
COL9A1-210ENST00000493682 NGRNQ9NPE2 291 aaKnown RBP19.61■□□□□ 0.73
COL9A1-210ENST00000493682 FGFR4P22455 802 aa19.6■□□□□ 0.73
COL9A1-210ENST00000493682 SFNP31947 248 aa19.6■□□□□ 0.73
COL9A1-210ENST00000493682 JAK3P52333 1124 aa19.6■□□□□ 0.73
COL9A1-210ENST00000493682 KRT17Q04695 432 aa19.6■□□□□ 0.73
COL9A1-210ENST00000493682 TBC1D8BQ0IIM8 1120 aa19.6■□□□□ 0.73
COL9A1-210ENST00000493682 LRCH2Q5VUJ6 765 aa19.6■□□□□ 0.73
COL9A1-210ENST00000493682 LLGL2Q6P1M3 1020 aa19.6■□□□□ 0.73
COL9A1-210ENST00000493682 SYCE2Q6PIF2 218 aa19.6■□□□□ 0.73
COL9A1-210ENST00000493682 GJA10Q969M2 543 aa19.6■□□□□ 0.73
COL9A1-210ENST00000493682 SCLT1Q96NL6 688 aa19.6■□□□□ 0.73
COL9A1-210ENST00000493682 TEKT3Q9BXF9 490 aa19.6■□□□□ 0.73
COL9A1-210ENST00000493682 NCOA5Q9HCD5 579 aaKnown RBP19.6■□□□□ 0.73
COL9A1-210ENST00000493682 SPG21Q9NZD8 308 aa19.6■□□□□ 0.73
COL9A1-210ENST00000493682 WDR81Q562E7 1941 aa19.59■□□□□ 0.73
COL9A1-210ENST00000493682 A0A0U1RQF3 1178 aa19.59■□□□□ 0.73
COL9A1-210ENST00000493682 PDIA3P30101 505 aaKnown RBP19.59■□□□□ 0.73
COL9A1-210ENST00000493682 NLRP5P59047 1200 aa19.59■□□□□ 0.73
COL9A1-210ENST00000493682 CCT2P78371 535 aaKnown RBP19.59■□□□□ 0.73
COL9A1-210ENST00000493682 DRP2Q13474 957 aa19.59■□□□□ 0.73
COL9A1-210ENST00000493682 TARBP2Q15633 366 aaKnown RBP19.59■□□□□ 0.73
COL9A1-210ENST00000493682 IER5LQ5T953 404 aa19.59■□□□□ 0.73
COL9A1-210ENST00000493682 TMC7Q7Z402 723 aa19.59■□□□□ 0.73
COL9A1-210ENST00000493682 ZNF598Q86UK7 904 aaKnown RBP19.59■□□□□ 0.73
COL9A1-210ENST00000493682 NLRP7Q8WX94 980 aa19.59■□□□□ 0.73
COL9A1-210ENST00000493682 APOL5Q9BWW9 433 aa19.59■□□□□ 0.73
COL9A1-210ENST00000493682 SH3GLB2Q9NR46 395 aa19.59■□□□□ 0.73
COL9A1-210ENST00000493682 CSDE1O75534 798 aaKnown RBP19.58■□□□□ 0.72
COL9A1-210ENST00000493682 PSMD10O75832 226 aa19.58■□□□□ 0.72
COL9A1-210ENST00000493682 EOMESO95936 686 aa19.58■□□□□ 0.72
COL9A1-210ENST00000493682 EVCP57679 992 aa19.58■□□□□ 0.72
COL9A1-210ENST00000493682 SLC39A11Q8N1S5 342 aa19.58■□□□□ 0.72
COL9A1-210ENST00000493682 HELQQ8TDG4 1101 aa19.58■□□□□ 0.72
COL9A1-210ENST00000493682 TBCKQ8TEA7 893 aa19.58■□□□□ 0.72
COL9A1-210ENST00000493682 NIFKQ9BYG3 293 aaKnown RBP19.58■□□□□ 0.72
COL9A1-210ENST00000493682 DACT1Q9NYF0 836 aa19.58■□□□□ 0.72
COL9A1-210ENST00000493682 HOXB8P17481 243 aaPredicted RBP19.57■□□□□ 0.72
COL9A1-210ENST00000493682 PSMA5P28066 241 aa19.57■□□□□ 0.72
COL9A1-210ENST00000493682 SIGLEC14Q08ET2 396 aa19.57■□□□□ 0.72
COL9A1-210ENST00000493682 Q4G0T1 1027 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms