RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 HSD17B14Q9BPX1 270 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 NIFKQ9BYG3 293 aaKnown RBP12.93□□□□□ -0.34
CTSA-209ENST00000493522 CYP26B1Q9NR63 512 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 BMP2KQ9NSY1 1161 aaPredicted RBP12.93□□□□□ -0.34
CTSA-209ENST00000493522 LMCD1Q9NZU5 365 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 TFIP11Q9UBB9 837 aaKnown RBP12.93□□□□□ -0.34
CTSA-209ENST00000493522 ZDHHC9Q9Y397 364 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 HCN4Q9Y3Q4 1203 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 PCDHA2Q9Y5H9 948 aa12.93□□□□□ -0.34
CTSA-209ENST00000493522 SMIM35A0A1B0GVV1 85 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 LCHNA4D1U4 455 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 MAGEB2O15479 319 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 LPXNO60711 386 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 CAND2O75155 1236 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 LYPLA2O95372 231 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 CXCL10P02778 98 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 RPLP2P05387 115 aaKnown RBP12.92□□□□□ -0.34
CTSA-209ENST00000493522 SPATA31C1P0DKV0 1188 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 RPA1P27694 616 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 CDC25AP30304 524 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 CLCN3P51790 818 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 POLGP54098 1239 aaPredicted RBP12.92□□□□□ -0.34
CTSA-209ENST00000493522 NPEPPSP55786 919 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 NUCB2P80303 420 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 MRPS6P82932 125 aaKnown RBP12.92□□□□□ -0.34
CTSA-209ENST00000493522 DNM1Q05193 864 aaKnown RBP12.92□□□□□ -0.34
CTSA-209ENST00000493522 GRIN1Q05586 938 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 TMEM62Q0P6H9 643 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 SLC39A14Q15043 492 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 TARBP2Q15633 366 aaKnown RBP12.92□□□□□ -0.34
CTSA-209ENST00000493522 ZNF618Q5T7W0 954 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 LRRC71Q8N4P6 559 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 RASSF8Q8NHQ8 419 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 PIGOQ8TEQ8 1089 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 CDK5RAP3Q96JB5 506 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 AK8Q96MA6 479 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 MAP7D2Q96T17 732 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 RAD9AQ99638 391 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 SUGCTQ9HAC7 445 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 TSHZ2Q9NRE2 1034 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 FBXO2Q9UK22 296 aaPredicted RBP12.92□□□□□ -0.34
CTSA-209ENST00000493522 ATP6V1DQ9Y5K8 247 aa12.92□□□□□ -0.34
CTSA-209ENST00000493522 A0A087WWV3 80 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 ABHD14A-ACY1A0A1B0GW23 586 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 RSPH10B2B2RC85 870 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 M0QZ92 97 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 ZBTB39O15060 712 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 SPTLC2O15270 562 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 GJB5O95377 273 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 YEATS4O95619 227 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 RSPH10BP0C881 870 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 LONP1P36776 959 aaKnown RBP12.91□□□□□ -0.34
CTSA-209ENST00000493522 DEFB103AP81534 67 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 EMC2Q15006 297 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 EFCAB12Q6NXP0 572 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 SPRED2Q7Z698 418 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 CABP7Q86V35 215 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 KRI1Q8N9T8 703 aaKnown RBP12.91□□□□□ -0.34
CTSA-209ENST00000493522 GDPD5Q8WTR4 605 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 SLC7A3Q8WY07 619 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 NACC1Q96RE7 527 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 PPP1R16BQ96T49 567 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 ANKEF1Q9NU02 776 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 DDX19AQ9NUU7 478 aaKnown RBP12.91□□□□□ -0.34
CTSA-209ENST00000493522 KIAA1024Q9UPX6 916 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 AKT3Q9Y243 479 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 TRPV2Q9Y5S1 764 aa12.91□□□□□ -0.34
CTSA-209ENST00000493522 ARHGEF35A5YM69 484 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 USO1O60763 962 aaKnown RBP12.9□□□□□ -0.34
CTSA-209ENST00000493522 NBNO60934 754 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 MUTP22033 750 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 TMOD1P28289 359 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 DDIT3P35638 169 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 TXLNAP40222 546 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 RFC5P40937 340 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 UBA7P41226 1012 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 KRT85P78386 507 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 IKBKEQ14164 716 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 GPNMBQ14956 572 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 ECM1Q16610 540 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 TMEM31Q5JXX7 168 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 ATL3Q6DD88 541 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 TMCO2Q7Z6W1 182 aaPredicted RBP12.9□□□□□ -0.34
CTSA-209ENST00000493522 ZNF579Q8NAF0 562 aaKnown RBP12.9□□□□□ -0.34
CTSA-209ENST00000493522 LINC00301Q8NCQ3 95 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 CALML4Q96GE6 196 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 CHAMP1Q96JM3 812 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 SCLT1Q96NL6 688 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 CLIC6Q96NY7 704 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 TGS1Q96RS0 853 aaKnown RBP12.9□□□□□ -0.34
CTSA-209ENST00000493522 PLIN2Q99541 437 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 JPH2Q9BR39 696 aaPredicted RBP12.9□□□□□ -0.34
CTSA-209ENST00000493522 MMTAG2Q9BU76 263 aaKnown RBP12.9□□□□□ -0.34
CTSA-209ENST00000493522 CSRNP2Q9H175 543 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 EPHX3Q9H6B9 360 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 CFAP45Q9UL16 551 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 MTUS1Q9ULD2 1270 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 GINS2Q9Y248 185 aa12.9□□□□□ -0.34
CTSA-209ENST00000493522 ARIH1Q9Y4X5 557 aaPredicted RBP12.9□□□□□ -0.34
CTSA-209ENST00000493522 PPME1Q9Y570 386 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms