RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 POTEIP0CG38 1075 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 UCHL3P15374 230 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 DNAJA1P31689 397 aaKnown RBP10.58□□□□□ -0.72
TSC1-207ENST00000493467 HSPA9P38646 679 aaKnown RBP10.58□□□□□ -0.72
TSC1-207ENST00000493467 JAM2P57087 298 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 USP46P62068 366 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 MRPS25P82663 173 aaKnown RBP10.58□□□□□ -0.72
TSC1-207ENST00000493467 GUCY2DQ02846 1103 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 EPHA7Q15375 998 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 NFIL3Q16649 462 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 USP17L6PQ6QN14 398 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 POTEGQ6S5H5 508 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 POTEEQ6S8J3 1075 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 ZNF571Q7Z3V5 609 aaPredicted RBP10.58□□□□□ -0.72
TSC1-207ENST00000493467 SCFD2Q8WU76 684 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 TAF4BQ92750 862 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 ZDHHC16Q969W1 377 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 LENG9Q96B70 501 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 FAM20AQ96MK3 541 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 KRT12Q99456 494 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 LRRC4BQ9NT99 713 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 ADAMTS1Q9UHI8 967 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 INTUQ9ULD6 942 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 PCDHA1Q9Y5I3 950 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 RBBP6Q7Z6E9 1792 aaKnown RBP10.58□□□□□ -0.72
TSC1-207ENST00000493467 A0A087WUV0 522 aaPredicted RBP10.58□□□□□ -0.72
TSC1-207ENST00000493467 SRRM3A6NNA2 597 aaPredicted RBP10.58□□□□□ -0.72
TSC1-207ENST00000493467 GFPT2O94808 682 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 FOSP01100 380 aaPredicted RBP10.58□□□□□ -0.72
TSC1-207ENST00000493467 CIITAP33076 1130 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 HOXD13P35453 343 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 SREBF1P36956 1147 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 STAT3P40763 770 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 CASP5P51878 434 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 PTK2Q05397 1052 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 RPS6KA1Q15418 735 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 EXOC3L4Q17RC7 722 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 LRIG3Q6UXM1 1119 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 SFR1Q86XK3 245 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 CATSPER3Q86XQ3 398 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 TEX2Q8IWB9 1127 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 CCDC43Q96MW1 224 aaKnown RBP10.58□□□□□ -0.72
TSC1-207ENST00000493467 HINFPQ9BQA5 517 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.58□□□□□ -0.72
TSC1-207ENST00000493467 ISCUQ9H1K1 167 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 DNAJC18Q9H819 358 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 SIX2Q9NPC8 291 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 CXXC1Q9P0U4 656 aaPredicted RBP10.58□□□□□ -0.72
TSC1-207ENST00000493467 NAGPAQ9UK23 515 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 ASTN1O14525 1302 aa10.58□□□□□ -0.72
TSC1-207ENST00000493467 ZNF233A6NK53 670 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 POLRMTO00411 1230 aaKnown RBP10.57□□□□□ -0.72
TSC1-207ENST00000493467 EBAG9O00559 213 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 MPHOSPH10O00566 681 aaKnown RBP10.57□□□□□ -0.72
TSC1-207ENST00000493467 RAD51CO43502 376 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 FLOT1O75955 427 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 FAM153BP0C7A2 387 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 SPATA31C1P0DKV0 1188 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 XRCC5P13010 732 aaKnown RBP10.57□□□□□ -0.72
TSC1-207ENST00000493467 PON1P27169 355 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 NPEPPSP55786 919 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 DDR1Q08345 913 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 CUL1Q13616 776 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 PTPROQ16827 1216 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 FAM153CQ494X1 144 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 APOBEC3HQ6NTF7 200 aaKnown RBP10.57□□□□□ -0.72
TSC1-207ENST00000493467 SLFN11Q7Z7L1 901 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 RGL4Q8IZJ4 473 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 TEKT1Q969V4 418 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 SPAG5Q96R06 1193 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 REEP2Q9BRK0 252 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 PAGR1Q9BTK6 254 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 POLR3CQ9BUI4 534 aaPredicted RBP10.57□□□□□ -0.72
TSC1-207ENST00000493467 PLEKHA4Q9H4M7 779 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 TAF1DQ9H5J8 278 aaPredicted RBP10.57□□□□□ -0.72
TSC1-207ENST00000493467 FAM153AQ9UHL3 310 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 DNM3Q9UQ16 869 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 ZSCAN5CA6NGD5 496 aaPredicted RBP10.57□□□□□ -0.72
TSC1-207ENST00000493467 ZBBXA8MT70 800 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 CCDC188H7C350 402 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 SLC9A1P19634 815 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 RPL13P26373 211 aaKnown RBP10.57□□□□□ -0.72
TSC1-207ENST00000493467 CCT5P48643 541 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 SLC15A2Q16348 729 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 SLFN13Q68D06 897 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 TADA2BQ86TJ2 420 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 RASGEF1CQ8N431 466 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 ZNF454Q8N9F8 522 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 BCAS4Q8TDM0 211 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 MKNK1Q9BUB5 465 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 KANSL2Q9H9L4 492 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 EFCC1Q9HA90 598 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 OLFML3Q9NRN5 406 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 VAV3Q9UKW4 847 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 DAAM1Q9Y4D1 1078 aa10.57□□□□□ -0.72
TSC1-207ENST00000493467 HMGB1P1B2RPK0 211 aaPredicted RBP10.56□□□□□ -0.72
TSC1-207ENST00000493467 F8W031 263 aaPredicted RBP10.56□□□□□ -0.72
TSC1-207ENST00000493467 PGRMC1O00264 195 aaKnown RBP10.56□□□□□ -0.72
TSC1-207ENST00000493467 EIF3DO15371 548 aaKnown RBP eCLIP10.56□□□□□ -0.72
TSC1-207ENST00000493467 PARNO95453 639 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms