RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 FAM86B1E9PN63 330 aa20.04■□□□□ 0.8
NUP50-218ENST00000493456 SLC27A2O14975 620 aa20.04■□□□□ 0.8
NUP50-218ENST00000493456 FAM86B2P0C5J1 330 aa20.04■□□□□ 0.8
NUP50-218ENST00000493456 TMOD1P28289 359 aa20.04■□□□□ 0.8
NUP50-218ENST00000493456 SETQ01105 290 aaPredicted RBP20.04■□□□□ 0.8
NUP50-218ENST00000493456 COL9A3Q14050 684 aaPredicted RBP20.04■□□□□ 0.8
NUP50-218ENST00000493456 SLC39A11Q8N1S5 342 aa20.04■□□□□ 0.8
NUP50-218ENST00000493456 LRRC2Q9BYS8 371 aa20.04■□□□□ 0.8
NUP50-218ENST00000493456 TBC1D22BQ9NU19 505 aa20.04■□□□□ 0.8
NUP50-218ENST00000493456 TCEAL9Q9UHQ7 104 aa20.04■□□□□ 0.8
NUP50-218ENST00000493456 AKT3Q9Y243 479 aa20.04■□□□□ 0.8
NUP50-218ENST00000493456 IGLV3-22A0A075B6J6 115 aa20.03■□□□□ 0.8
NUP50-218ENST00000493456 EIF4BP23588 611 aaKnown RBP20.03■□□□□ 0.8
NUP50-218ENST00000493456 CLCN3P51790 818 aa20.03■□□□□ 0.8
NUP50-218ENST00000493456 APOA5Q6Q788 366 aa20.03■□□□□ 0.8
NUP50-218ENST00000493456 TMEM105Q8N8V8 129 aa20.03■□□□□ 0.8
NUP50-218ENST00000493456 RSPH1Q8WYR4 309 aa20.03■□□□□ 0.8
NUP50-218ENST00000493456 FAM167AQ96KS9 214 aa20.03■□□□□ 0.8
NUP50-218ENST00000493456 ZNF577Q9BSK1 485 aa20.03■□□□□ 0.8
NUP50-218ENST00000493456 MRPL9Q9BYD2 267 aaKnown RBP20.03■□□□□ 0.8
NUP50-218ENST00000493456 LSG1Q9H089 658 aaKnown RBP20.03■□□□□ 0.8
NUP50-218ENST00000493456 DZANK1Q9NVP4 752 aa20.03■□□□□ 0.8
NUP50-218ENST00000493456 CDH22Q9UJ99 828 aa20.03■□□□□ 0.8
NUP50-218ENST00000493456 CARNS1A5YM72 827 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 PRR23AA6NEV1 266 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 CLASP2O75122 1294 aaKnown RBP20.02■□□□□ 0.8
NUP50-218ENST00000493456 EOMESO95936 686 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 PSAPP07602 524 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 CYP3A4P08684 503 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 NLRP11P59045 1033 aaKnown RBP20.02■□□□□ 0.8
NUP50-218ENST00000493456 FUT2Q10981 343 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 RTN1Q16799 776 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 CREB3L3Q68CJ9 461 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 ASTLQ6HA08 431 aaPredicted RBP20.02■□□□□ 0.8
NUP50-218ENST00000493456 KIAA1841Q6NSI8 718 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 ASCL5Q7RTU5 278 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 ZDHHC14Q8IZN3 488 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 PLCD3Q8N3E9 789 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 TDRD5Q8NAT2 981 aaKnown RBP20.02■□□□□ 0.8
NUP50-218ENST00000493456 CRYGNQ8WXF5 182 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 ADAMTS10Q9H324 1103 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 USTQ9Y2C2 406 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 PCDHA10Q9Y5I2 948 aa20.02■□□□□ 0.8
NUP50-218ENST00000493456 A0A0U1RQF3 1178 aa20.01■□□□□ 0.79
NUP50-218ENST00000493456 NECTIN1Q15223 517 aa20.01■□□□□ 0.79
NUP50-218ENST00000493456 CLLU1OSQ5K130 101 aa20.01■□□□□ 0.79
NUP50-218ENST00000493456 MCTP2Q6DN12 878 aa20.01■□□□□ 0.79
NUP50-218ENST00000493456 EFCAB12Q6NXP0 572 aa20.01■□□□□ 0.79
NUP50-218ENST00000493456 LINC01465Q8N7H1 131 aa20.01■□□□□ 0.79
NUP50-218ENST00000493456 RNF169Q8NCN4 708 aa20.01■□□□□ 0.79
NUP50-218ENST00000493456 TMEM169Q96HH4 297 aa20.01■□□□□ 0.79
NUP50-218ENST00000493456 V9GY48 417 aaPredicted RBP20.01■□□□□ 0.79
NUP50-218ENST00000493456 CA8P35219 290 aa20■□□□□ 0.79
NUP50-218ENST00000493456 ALDH7A1P49419 539 aaKnown RBP20■□□□□ 0.79
NUP50-218ENST00000493456 CLCN5P51795 746 aa20■□□□□ 0.79
NUP50-218ENST00000493456 GIT2Q14161 759 aa20■□□□□ 0.79
NUP50-218ENST00000493456 TRMT1LQ7Z2T5 733 aaKnown RBP20■□□□□ 0.79
NUP50-218ENST00000493456 ZNF598Q86UK7 904 aaKnown RBP20■□□□□ 0.79
NUP50-218ENST00000493456 TMEM87AQ8NBN3 555 aa20■□□□□ 0.79
NUP50-218ENST00000493456 MFSD1Q9H3U5 465 aa20■□□□□ 0.79
NUP50-218ENST00000493456 DACT1Q9NYF0 836 aa20■□□□□ 0.79
NUP50-218ENST00000493456 GABBR1Q9UBS5 961 aa20■□□□□ 0.79
NUP50-218ENST00000493456 MYH9P35579 1960 aaKnown RBP20■□□□□ 0.79
NUP50-218ENST00000493456 PTPRZ1P23471 2315 aaPredicted RBP19.99■□□□□ 0.79
NUP50-218ENST00000493456 ZBTB43O43298 467 aa19.99■□□□□ 0.79
NUP50-218ENST00000493456 BCAR1P56945 870 aa19.99■□□□□ 0.79
NUP50-218ENST00000493456 ATAT1Q5SQI0 421 aa19.99■□□□□ 0.79
NUP50-218ENST00000493456 RARS2Q5T160 578 aaKnown RBP19.99■□□□□ 0.79
NUP50-218ENST00000493456 JAKMIP3Q5VZ66 844 aa19.99■□□□□ 0.79
NUP50-218ENST00000493456 HELQQ8TDG4 1101 aa19.99■□□□□ 0.79
NUP50-218ENST00000493456 ZBP1Q9H171 429 aa19.99■□□□□ 0.79
NUP50-218ENST00000493456 DBR1Q9UK59 544 aaKnown RBP19.99■□□□□ 0.79
NUP50-218ENST00000493456 SAMM50Q9Y512 469 aa19.99■□□□□ 0.79
NUP50-218ENST00000493456 IRAK3Q9Y616 596 aa19.99■□□□□ 0.79
NUP50-218ENST00000493456 RIF1Q5UIP0 2472 aaKnown RBP19.99■□□□□ 0.79
NUP50-218ENST00000493456 FRYLO94915 3013 aa19.99■□□□□ 0.79
NUP50-218ENST00000493456 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.98■□□□□ 0.79
NUP50-218ENST00000493456 CXCL14O95715 111 aa19.98■□□□□ 0.79
NUP50-218ENST00000493456 ASGR2P07307 311 aa19.98■□□□□ 0.79
NUP50-218ENST00000493456 DARSP14868 501 aaKnown RBP19.98■□□□□ 0.79
NUP50-218ENST00000493456 METAP2P50579 478 aaKnown RBP eCLIP19.98■□□□□ 0.79
NUP50-218ENST00000493456 GPC3P51654 580 aa19.98■□□□□ 0.79
NUP50-218ENST00000493456 POLGP54098 1239 aaPredicted RBP19.98■□□□□ 0.79
NUP50-218ENST00000493456 VPS52Q8N1B4 723 aa19.98■□□□□ 0.79
NUP50-218ENST00000493456 LRRC71Q8N4P6 559 aa19.98■□□□□ 0.79
NUP50-218ENST00000493456 SCLT1Q96NL6 688 aa19.98■□□□□ 0.79
NUP50-218ENST00000493456 DMXL1Q9Y485 3027 aa19.97■□□□□ 0.79
NUP50-218ENST00000493456 ESYT2A0FGR8 921 aa19.97■□□□□ 0.79
NUP50-218ENST00000493456 GOLGA8AA7E2F4 631 aa19.97■□□□□ 0.79
NUP50-218ENST00000493456 GOLGA8BA8MQT2 603 aa19.97■□□□□ 0.79
NUP50-218ENST00000493456 WDR64B1ANS9 1081 aa19.97■□□□□ 0.79
NUP50-218ENST00000493456 OATP04181 439 aa19.97■□□□□ 0.79
NUP50-218ENST00000493456 RCAN1P53805 252 aa19.97■□□□□ 0.79
NUP50-218ENST00000493456 RNF20Q5VTR2 975 aa19.97■□□□□ 0.79
NUP50-218ENST00000493456 NKD2Q969F2 451 aaPredicted RBP19.97■□□□□ 0.79
NUP50-218ENST00000493456 ESYT1Q9BSJ8 1104 aa19.97■□□□□ 0.79
NUP50-218ENST00000493456 SMOC2Q9H3U7 446 aa19.97■□□□□ 0.79
NUP50-218ENST00000493456 NRBP2Q9NSY0 501 aa19.97■□□□□ 0.79
NUP50-218ENST00000493456 LIMD1Q9UGP4 676 aa19.97■□□□□ 0.79
NUP50-218ENST00000493456 FAM186AA6NE01 2351 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms