RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 KLHL14Q9P2G3 628 aa7.3□□□□□ -1.24
EWSR1-220ENST00000493426 LARSQ9P2J5 1176 aaKnown RBP7.3□□□□□ -1.24
EWSR1-220ENST00000493426 ATXN10Q9UBB4 475 aa7.3□□□□□ -1.24
EWSR1-220ENST00000493426 STOML1Q9UBI4 398 aa7.3□□□□□ -1.24
EWSR1-220ENST00000493426 PCYOX1Q9UHG3 505 aa7.3□□□□□ -1.24
EWSR1-220ENST00000493426 AMACRQ9UHK6 382 aa7.3□□□□□ -1.24
EWSR1-220ENST00000493426 PHF24Q9UPV7 400 aa7.3□□□□□ -1.24
EWSR1-220ENST00000493426 TBC1D30Q9Y2I9 924 aa7.3□□□□□ -1.24
EWSR1-220ENST00000493426 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.3□□□□□ -1.24
EWSR1-220ENST00000493426 STARD13Q9Y3M8 1113 aa7.3□□□□□ -1.24
EWSR1-220ENST00000493426 MYH7BA7E2Y1 1941 aa7.3□□□□□ -1.24
EWSR1-220ENST00000493426 COL18A1P39060 1754 aa7.3□□□□□ -1.24
EWSR1-220ENST00000493426 MAGEA13PA6NCF6 341 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 RASGRF2O14827 1237 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 BACH1O14867 736 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 DDX3YO15523 660 aaKnown RBP7.29□□□□□ -1.24
EWSR1-220ENST00000493426 ZSCAN9O15535 394 aaPredicted RBP7.29□□□□□ -1.24
EWSR1-220ENST00000493426 TTI1O43156 1089 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 PRDM1O75626 825 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 PLEKHA8P1O95397 391 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 OR52Z1P0C646 297 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 SKIP12755 728 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 PLCG1P19174 1290 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 SMARCA1P28370 1054 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 CHRNA3P32297 505 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 PCK1P35558 622 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 PHKA1P46020 1223 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 ASIC1P78348 528 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 IFI35P80217 286 aaPredicted RBP7.29□□□□□ -1.24
EWSR1-220ENST00000493426 KLHL30Q0D2K2 578 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 KPNB1Q14974 876 aaKnown RBP7.29□□□□□ -1.24
EWSR1-220ENST00000493426 MTFR1Q15390 333 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 PUM3Q15397 648 aaKnown RBP7.29□□□□□ -1.24
EWSR1-220ENST00000493426 ZRSR2Q15696 482 aaKnown RBP7.29□□□□□ -1.24
EWSR1-220ENST00000493426 CYP1B1Q16678 543 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 GNPTABQ3T906 1256 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 TDRD12Q587J7 1177 aaKnown RBP7.29□□□□□ -1.24
EWSR1-220ENST00000493426 CCDC178Q5BJE1 867 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 KIAA1755Q5JYT7 1200 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 IFIT1BQ5T764 474 aaKnown RBP7.29□□□□□ -1.24
EWSR1-220ENST00000493426 PPP1R21Q6ZMI0 780 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 MAMSTRQ6ZN01 415 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 SV2BQ7L1I2 683 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 CYFIP1Q7L576 1253 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 PEX26Q7Z412 305 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 NELFCDQ8IXH7 590 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 CMTR1Q8N1G2 835 aaKnown RBP7.29□□□□□ -1.24
EWSR1-220ENST00000493426 CCDC82Q8N4S0 544 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 ZNF398Q8TD17 642 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 C7orf43Q8WVR3 580 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 MAIP1Q8WWC4 291 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 MAGEB18Q96M61 343 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 HAPLN3Q96S86 360 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 LZTS2Q9BRK4 669 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 TMEM60Q9H2L4 133 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 ARMT1Q9H993 441 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 GRHL1Q9NZI5 618 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 IL1RAPL1Q9NZN1 696 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 LMCD1Q9NZU5 365 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 MTRF1LQ9UGC7 380 aaKnown RBP7.29□□□□□ -1.24
EWSR1-220ENST00000493426 CIDEBQ9UHD4 219 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 LGALS13Q9UHV8 139 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 SCOCQ9UIL1 159 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 LNPEPQ9UIQ6 1025 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 RASAL2Q9UJF2 1139 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 NAGPAQ9UK23 515 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 ATP8A1Q9Y2Q0 1164 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 PCDHA3Q9Y5H8 950 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 COL4A3BPQ9Y5P4 624 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 SLC4A4Q9Y6R1 1079 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 MYH13Q9UKX3 1938 aa7.29□□□□□ -1.24
EWSR1-220ENST00000493426 NCANO14594 1321 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 RPTORQ8N122 1335 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 PITPNM2Q9BZ72 1349 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 RGPD2P0DJD1 1756 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 TNS3Q68CZ2 1445 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 CCDC194A0A1B0GVG4 234 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 SPDYE5A6NIY4 337 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 ERVV-2B6SEH9 535 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 BTBD19C9JJ37 291 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 NKRFO15226 690 aaKnown RBP eCLIP7.28□□□□□ -1.24
EWSR1-220ENST00000493426 RIPK2O43353 540 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 STRNO43815 780 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 CREB3O43889 395 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 AFPP02771 609 aaKnown RBP7.28□□□□□ -1.24
EWSR1-220ENST00000493426 SHBGP04278 402 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 FCER1AP12319 257 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 ITGA4P13612 1032 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 VHLP40337 213 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 RAD23BP54727 409 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 CABP4P57796 275 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 RPL26P61254 145 aaKnown RBP7.28□□□□□ -1.24
EWSR1-220ENST00000493426 DR1Q01658 176 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 RNASELQ05823 741 aaKnown RBP7.28□□□□□ -1.24
EWSR1-220ENST00000493426 SFSWAPQ12872 951 aaKnown RBP7.28□□□□□ -1.24
EWSR1-220ENST00000493426 MAPK7Q13164 816 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 SLC29A2Q14542 456 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 NKX1-1Q15270 411 aaPredicted RBP7.28□□□□□ -1.24
EWSR1-220ENST00000493426 RASA2Q15283 850 aa7.28□□□□□ -1.24
EWSR1-220ENST00000493426 EDRF1Q3B7T1 1238 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms