RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 GPRC5CQ9NQ84 441 aa19.08■□□□□ 0.64
LIME1-208ENST00000493265 KBTBD4Q9NVX7 518 aa19.08■□□□□ 0.64
LIME1-208ENST00000493265 LOXHD1Q8IVV2 1947 aa19.08■□□□□ 0.64
LIME1-208ENST00000493265 KAT6AQ92794 2004 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 B4GALT4O60513 344 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 HIP1RO75146 1068 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 PRR29P0C7W0 189 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 PTMSP20962 102 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 CDK7P50613 346 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 AMPD3Q01432 767 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 DRP2Q13474 957 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 SHHQ15465 462 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 ZNF697Q5TEC3 545 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 FAM109BQ6ICB4 259 aaPredicted RBP19.07■□□□□ 0.64
LIME1-208ENST00000493265 DDX12PQ92771 950 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 CCDC34Q96HJ3 373 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 PPP1R16BQ96T49 567 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 REEP2Q9BRK0 252 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 XPNPEP1Q9NQW7 623 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 AKT3Q9Y243 479 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 PPME1Q9Y570 386 aa19.07■□□□□ 0.64
LIME1-208ENST00000493265 SFI1A8K8P3 1242 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 IDEP14735 1019 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 HOXC8P31273 242 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 DNM2P50570 870 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 ASIC1P78348 528 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 ADAM17P78536 824 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 TMEM62Q0P6H9 643 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 CUL4BQ13620 913 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 C9orf50Q5SZB4 431 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 KANK3Q6NY19 840 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.06■□□□□ 0.64
LIME1-208ENST00000493265 EXOC8Q8IYI6 725 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 MCPH1Q8NEM0 835 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 DNAJB3Q8WWF6 145 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 ERCC4Q92889 916 aaPredicted RBP19.06■□□□□ 0.64
LIME1-208ENST00000493265 BADQ92934 168 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 ZNF668Q96K58 619 aaPredicted RBP19.06■□□□□ 0.64
LIME1-208ENST00000493265 TIGD1Q96MW7 591 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 JPH2Q9BR39 696 aaPredicted RBP19.06■□□□□ 0.64
LIME1-208ENST00000493265 LRRC27Q9C0I9 530 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 POLR3FQ9H1D9 316 aaPredicted RBP19.06■□□□□ 0.64
LIME1-208ENST00000493265 PCDHA2Q9Y5H9 948 aa19.06■□□□□ 0.64
LIME1-208ENST00000493265 MBLAC1A4D2B0 266 aaPredicted RBP19.05■□□□□ 0.64
LIME1-208ENST00000493265 DCDC2CA8MYV0 355 aa19.05■□□□□ 0.64
LIME1-208ENST00000493265 RSPH10B2B2RC85 870 aa19.05■□□□□ 0.64
LIME1-208ENST00000493265 TLR3O15455 904 aaKnown RBP19.05■□□□□ 0.64
LIME1-208ENST00000493265 TBCAO75347 108 aaKnown RBP19.05■□□□□ 0.64
LIME1-208ENST00000493265 VTNP04004 478 aa19.05■□□□□ 0.64
LIME1-208ENST00000493265 RSPH10BP0C881 870 aa19.05■□□□□ 0.64
LIME1-208ENST00000493265 TMOD1P28289 359 aa19.05■□□□□ 0.64
LIME1-208ENST00000493265 TLE2Q04725 743 aa19.05■□□□□ 0.64
LIME1-208ENST00000493265 MKRN4PQ13434 485 aaPredicted RBP19.05■□□□□ 0.64
LIME1-208ENST00000493265 PNOCQ13519 176 aa19.05■□□□□ 0.64
LIME1-208ENST00000493265 GIT2Q14161 759 aa19.05■□□□□ 0.64
LIME1-208ENST00000493265 SH3RF1Q7Z6J0 888 aa19.05■□□□□ 0.64
LIME1-208ENST00000493265 FAM126BQ8IXS8 530 aa19.05■□□□□ 0.64
LIME1-208ENST00000493265 TRIM9Q9C026 710 aa19.05■□□□□ 0.64
LIME1-208ENST00000493265 PDLIM7Q9NR12 457 aa19.05■□□□□ 0.64
LIME1-208ENST00000493265 SUCLA2Q9P2R7 463 aaPredicted RBP19.05■□□□□ 0.64
LIME1-208ENST00000493265 TRIP12Q14669 1992 aaPredicted RBP19.04■□□□□ 0.64
LIME1-208ENST00000493265 MROH7Q68CQ1 1323 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 IGKV6-21A0A0C4DH24 114 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 GTPBP6O43824 516 aaPredicted RBP19.04■□□□□ 0.64
LIME1-208ENST00000493265 FAM13AO94988 1023 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 GUCY2CP25092 1073 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 SNX17Q15036 470 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 POSTNQ15063 836 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 SERINC5Q86VE9 423 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 RHPN2Q8IUC4 686 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 KSR1Q8IVT5 923 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 KIAA0319LQ8IZA0 1049 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 TCP11Q8WWU5 503 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 WNT8BQ93098 351 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 CTAGE1Q96RT6 745 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 MAP7D2Q96T17 732 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 C7orf25Q9BPX7 421 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 COL25A1Q9BXS0 654 aaPredicted RBP19.04■□□□□ 0.64
LIME1-208ENST00000493265 SEZ6LQ9BYH1 1024 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 KCND2Q9NZV8 630 aa19.04■□□□□ 0.64
LIME1-208ENST00000493265 HOOK1Q9UJC3 728 aaKnown RBP19.04■□□□□ 0.64
LIME1-208ENST00000493265 SMIM35A0A1B0GVV1 85 aa19.03■□□□□ 0.64
LIME1-208ENST00000493265 CTSHP09668 335 aa19.03■□□□□ 0.64
LIME1-208ENST00000493265 THPOP40225 353 aa19.03■□□□□ 0.64
LIME1-208ENST00000493265 PTK7Q13308 1070 aa19.03■□□□□ 0.64
LIME1-208ENST00000493265 IER5Q5VY09 327 aa19.03■□□□□ 0.64
LIME1-208ENST00000493265 ASAP3Q8TDY4 903 aa19.03■□□□□ 0.64
LIME1-208ENST00000493265 PRPF31Q8WWY3 499 aaKnown RBP19.03■□□□□ 0.64
LIME1-208ENST00000493265 PSPC1Q8WXF1 523 aaKnown RBP19.03■□□□□ 0.64
LIME1-208ENST00000493265 DNAJC19Q96DA6 116 aa19.03■□□□□ 0.64
LIME1-208ENST00000493265 DRC1Q96MC2 740 aa19.03■□□□□ 0.64
LIME1-208ENST00000493265 SCLT1Q96NL6 688 aa19.03■□□□□ 0.64
LIME1-208ENST00000493265 NUP62CLQ9H1M0 184 aa19.03■□□□□ 0.64
LIME1-208ENST00000493265 CLSTN2Q9H4D0 955 aa19.03■□□□□ 0.64
LIME1-208ENST00000493265 PANK4Q9NVE7 773 aa19.03■□□□□ 0.64
LIME1-208ENST00000493265 GINS2Q9Y248 185 aa19.03■□□□□ 0.64
LIME1-208ENST00000493265 EVPLQ92817 2033 aa19.02■□□□□ 0.64
LIME1-208ENST00000493265 TRIM43BA6NCK2 446 aa19.02■□□□□ 0.64
LIME1-208ENST00000493265 GAS2O43903 313 aaKnown RBP19.02■□□□□ 0.64
LIME1-208ENST00000493265 SRGAP2CP0DJJ0 459 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms