RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ADAMTS10Q9H324 1103 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 PADI3Q9ULW8 664 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 NLRC5Q86WI3 1866 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 TTC3P53804 2025 aa14.24□□□□□ -0.13
CLIP2-209ENST00000493166 USO1O60763 962 aaKnown RBP14.23□□□□□ -0.13
CLIP2-209ENST00000493166 AMHP03971 560 aa14.23□□□□□ -0.13
CLIP2-209ENST00000493166 MARCKSP29966 332 aaPredicted RBP14.23□□□□□ -0.13
CLIP2-209ENST00000493166 LONP1P36776 959 aaKnown RBP14.23□□□□□ -0.13
CLIP2-209ENST00000493166 DEFB103AP81534 67 aa14.23□□□□□ -0.13
CLIP2-209ENST00000493166 NFX1Q12986 1120 aaKnown RBP14.23□□□□□ -0.13
CLIP2-209ENST00000493166 FOXD4L6Q3SYB3 417 aaPredicted RBP14.23□□□□□ -0.13
CLIP2-209ENST00000493166 FOXD4L3Q6VB84 417 aaPredicted RBP14.23□□□□□ -0.13
CLIP2-209ENST00000493166 CABP7Q86V35 215 aa14.23□□□□□ -0.13
CLIP2-209ENST00000493166 PHOSPHO2Q8TCD6 241 aa14.23□□□□□ -0.13
CLIP2-209ENST00000493166 TMEM40Q8WWA1 233 aa14.23□□□□□ -0.13
CLIP2-209ENST00000493166 CDK5RAP3Q96JB5 506 aa14.23□□□□□ -0.13
CLIP2-209ENST00000493166 NLRP4Q96MN2 994 aa14.23□□□□□ -0.13
CLIP2-209ENST00000493166 NOC2LQ9Y3T9 749 aaKnown RBP14.23□□□□□ -0.13
CLIP2-209ENST00000493166 COL4A3BPQ9Y5P4 624 aa14.23□□□□□ -0.13
CLIP2-209ENST00000493166 CHD7Q9P2D1 2997 aa14.23□□□□□ -0.13
CLIP2-209ENST00000493166 GPR182O15218 404 aa14.22□□□□□ -0.13
CLIP2-209ENST00000493166 EIF4BP23588 611 aaKnown RBP14.22□□□□□ -0.13
CLIP2-209ENST00000493166 UBA7P41226 1012 aa14.22□□□□□ -0.13
CLIP2-209ENST00000493166 GRIN1Q05586 938 aa14.22□□□□□ -0.13
CLIP2-209ENST00000493166 STK38Q15208 465 aa14.22□□□□□ -0.13
CLIP2-209ENST00000493166 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.22□□□□□ -0.13
CLIP2-209ENST00000493166 ZNF410Q86VK4 478 aa14.22□□□□□ -0.13
CLIP2-209ENST00000493166 FAM228AQ86W67 206 aa14.22□□□□□ -0.13
CLIP2-209ENST00000493166 KSR1Q8IVT5 923 aa14.22□□□□□ -0.13
CLIP2-209ENST00000493166 MYOCDQ8IZQ8 938 aa14.22□□□□□ -0.13
CLIP2-209ENST00000493166 MCPH1Q8NEM0 835 aa14.22□□□□□ -0.13
CLIP2-209ENST00000493166 PRPF31Q8WWY3 499 aaKnown RBP14.22□□□□□ -0.13
CLIP2-209ENST00000493166 FTHL17Q9BXU8 183 aa14.22□□□□□ -0.13
CLIP2-209ENST00000493166 GCOM2Q9BZD3 368 aaPredicted RBP14.22□□□□□ -0.13
CLIP2-209ENST00000493166 NT5C3AQ9H0P0 336 aa14.22□□□□□ -0.13
CLIP2-209ENST00000493166 BHMT2Q9H2M3 363 aa14.22□□□□□ -0.13
CLIP2-209ENST00000493166 ERVK-5Q9HDB9 667 aa14.22□□□□□ -0.13
CLIP2-209ENST00000493166 XPNPEP1Q9NQW7 623 aa14.22□□□□□ -0.13
CLIP2-209ENST00000493166 DNM3Q9UQ16 869 aa14.22□□□□□ -0.13
CLIP2-209ENST00000493166 FNDC1Q4ZHG4 1894 aaPredicted RBP14.21□□□□□ -0.13
CLIP2-209ENST00000493166 A0A087WZ62 844 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 E9PMD0 336 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 ASAP2O43150 1006 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 SLC26A4O43511 780 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 EYA4O95677 639 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 SRGAP2CP0DJJ0 459 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 DARSP14868 501 aaKnown RBP14.21□□□□□ -0.13
CLIP2-209ENST00000493166 DNAJB2P25686 324 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 PBX2P40425 430 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 NASPP49321 788 aaPredicted RBP14.21□□□□□ -0.13
CLIP2-209ENST00000493166 RABGGTBP53611 331 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 LAMTOR4Q0VGL1 99 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 MXD4Q14582 209 aaPredicted RBP14.21□□□□□ -0.13
CLIP2-209ENST00000493166 SLC39A14Q15043 492 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 RAB30Q15771 203 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 HYIQ5T013 277 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 PADI6Q6TGC4 694 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 MAEAQ7L5Y9 396 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 HERC6Q8IVU3 1022 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 RASSF8Q8NHQ8 419 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 CALML4Q96GE6 196 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 FDXACB1Q9BRP7 624 aaPredicted RBP14.21□□□□□ -0.13
CLIP2-209ENST00000493166 PBX4Q9BYU1 374 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 CSRNP2Q9H175 543 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 TFIP11Q9UBB9 837 aaKnown RBP14.21□□□□□ -0.13
CLIP2-209ENST00000493166 DAXXQ9UER7 740 aaPredicted RBP14.21□□□□□ -0.13
CLIP2-209ENST00000493166 MSRAQ9UJ68 235 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 FBXO2Q9UK22 296 aaPredicted RBP14.21□□□□□ -0.13
CLIP2-209ENST00000493166 ST3GAL5Q9UNP4 418 aa14.21□□□□□ -0.13
CLIP2-209ENST00000493166 SRPRBQ9Y5M8 271 aaKnown RBP14.21□□□□□ -0.13
CLIP2-209ENST00000493166 MORC2Q9Y6X9 1032 aaPredicted RBP14.21□□□□□ -0.13
CLIP2-209ENST00000493166 TRANK1O15050 2925 aa14.21□□□□□ -0.14
CLIP2-209ENST00000493166 RALGAPA2Q2PPJ7 1873 aa14.21□□□□□ -0.14
CLIP2-209ENST00000493166 KIAA1671Q9BY89 1806 aa14.2□□□□□ -0.14
CLIP2-209ENST00000493166 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.2□□□□□ -0.14
CLIP2-209ENST00000493166 YEATS4O95619 227 aa14.2□□□□□ -0.14
CLIP2-209ENST00000493166 BRD1O95696 1058 aa14.2□□□□□ -0.14
CLIP2-209ENST00000493166 GRB10Q13322 594 aa14.2□□□□□ -0.14
CLIP2-209ENST00000493166 TFDP1Q14186 410 aa14.2□□□□□ -0.14
CLIP2-209ENST00000493166 FAM102BQ5T8I3 360 aa14.2□□□□□ -0.14
CLIP2-209ENST00000493166 GPR153Q6NV75 609 aa14.2□□□□□ -0.14
CLIP2-209ENST00000493166 FAM117BQ6P1L5 589 aa14.2□□□□□ -0.14
CLIP2-209ENST00000493166 KCNK18Q7Z418 384 aa14.2□□□□□ -0.14
CLIP2-209ENST00000493166 TMCO2Q7Z6W1 182 aaPredicted RBP14.2□□□□□ -0.14
CLIP2-209ENST00000493166 KRI1Q8N9T8 703 aaKnown RBP14.2□□□□□ -0.14
CLIP2-209ENST00000493166 PNMA5Q96PV4 448 aa14.2□□□□□ -0.14
CLIP2-209ENST00000493166 PLIN2Q99541 437 aa14.2□□□□□ -0.14
CLIP2-209ENST00000493166 ZBED2Q9BTP6 218 aa14.2□□□□□ -0.14
CLIP2-209ENST00000493166 INO80BQ9C086 356 aaPredicted RBP14.2□□□□□ -0.14
CLIP2-209ENST00000493166 POLR3FQ9H1D9 316 aaPredicted RBP14.2□□□□□ -0.14
CLIP2-209ENST00000493166 TMX1Q9H3N1 280 aa14.2□□□□□ -0.14
CLIP2-209ENST00000493166 PCDHA11Q9Y5I1 949 aa14.2□□□□□ -0.14
CLIP2-209ENST00000493166 CDH23Q9H251 3354 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 DENND3A2RUS2 1198 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 ENPP3O14638 875 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 SPTLC2O15270 562 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 TLL1O43897 1013 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 CSDE1O75534 798 aaKnown RBP14.19□□□□□ -0.14
CLIP2-209ENST00000493166 UPP2O95045 317 aa14.19□□□□□ -0.14
CLIP2-209ENST00000493166 CYP11B2P19099 503 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms