RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 LRRC71Q8N4P6 559 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 WNT8BQ93098 351 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 TMEM143Q96AN5 459 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 GLT1D1Q96MS3 346 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 NUP62CLQ9H1M0 184 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 GEMIN8Q9NWZ8 242 aaKnown RBP10.39□□□□□ -0.75
CSTF1-206ENST00000493039 KBTBD13C9JR72 458 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 HIP1RO75146 1068 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 EN2P19622 333 aaPredicted RBP10.39□□□□□ -0.75
CSTF1-206ENST00000493039 BMP6P22004 513 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 ZNF131P52739 623 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 SLC20A2Q08357 652 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 TBC1D8BQ0IIM8 1120 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 EMC2Q15006 297 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 SKOR2Q2VWA4 1001 aaPredicted RBP10.39□□□□□ -0.75
CSTF1-206ENST00000493039 KANK3Q6NY19 840 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 NFRKBQ6P4R8 1299 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 RUFY4Q6ZNE9 571 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 UBE2Q1Q7Z7E8 422 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 KIAA0319LQ8IZA0 1049 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 C7orf31Q8N865 590 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 BSNDQ8WZ55 320 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 HPS3Q969F9 1004 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 FIZ1Q96SL8 496 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 KCND2Q9NZV8 630 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 TUBE1Q9UJT0 475 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 COL1A2P08123 1366 aa10.39□□□□□ -0.75
CSTF1-206ENST00000493039 RRN3P2A6NIE6 340 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 ARL2P36404 184 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 CLCN3P51790 818 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 EFCAB12Q6NXP0 572 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 VTI1AQ96AJ9 217 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 FGFBP2Q9BYJ0 223 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 SENP6Q9GZR1 1112 aaPredicted RBP10.38□□□□□ -0.75
CSTF1-206ENST00000493039 SUGCTQ9HAC7 445 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 STARD7Q9NQZ5 370 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 TRMT13Q9NUP7 481 aaKnown RBP10.38□□□□□ -0.75
CSTF1-206ENST00000493039 KIAA1468Q9P260 1216 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 PCDHA2Q9Y5H9 948 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 ARVCFO00192 962 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 RFC5P40937 340 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 POLGP54098 1239 aaPredicted RBP10.38□□□□□ -0.75
CSTF1-206ENST00000493039 AMPD3Q01432 767 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 CCDC183Q5T5S1 534 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 KSR1Q8IVT5 923 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 GLIS3Q8NEA6 775 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 ASAP3Q8TDY4 903 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 SLC7A3Q8WY07 619 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 PAWRQ96IZ0 340 aaKnown RBP10.38□□□□□ -0.75
CSTF1-206ENST00000493039 TMEM106CQ9BVX2 250 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 TRPV6Q9H1D0 765 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 ATP6V0A4Q9HBG4 840 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 PPME1Q9Y570 386 aa10.38□□□□□ -0.75
CSTF1-206ENST00000493039 C17orf102A2RUQ5 167 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 RPN1P04843 607 aaKnown RBP10.37□□□□□ -0.75
CSTF1-206ENST00000493039 MYL1P05976 194 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 ASIC1P78348 528 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 KMT5BQ4FZB7 885 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 FAM102BQ5T8I3 360 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 TAF3Q5VWG9 929 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 ARMCX6Q7L4S7 300 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 ANKLE1Q8NAG6 615 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 PRPF31Q8WWY3 499 aaKnown RBP10.37□□□□□ -0.75
CSTF1-206ENST00000493039 PVALEFA0A1B0GWK0 134 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 MAGEB2O15479 319 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 ZNF500O60304 480 aaPredicted RBP10.37□□□□□ -0.75
CSTF1-206ENST00000493039 B4GALT4O60513 344 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 IDEP14735 1019 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 GLRA2P23416 452 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 ATN1P54259 1190 aaPredicted RBP10.37□□□□□ -0.75
CSTF1-206ENST00000493039 STK4Q13043 487 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 FAM47CQ5HY64 1035 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 ISM2Q6H9L7 571 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 SLC39A5Q6ZMH5 540 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 UNC13DQ70J99 1090 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 SERINC5Q86VE9 423 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 METTL13Q8N6R0 699 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 MCPH1Q8NEM0 835 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 DHX38Q92620 1227 aaKnown RBP10.37□□□□□ -0.75
CSTF1-206ENST00000493039 CCDC43Q96MW1 224 aaKnown RBP10.37□□□□□ -0.75
CSTF1-206ENST00000493039 PANK4Q9NVE7 773 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 MAN1B1Q9UKM7 699 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 ODF2LQ9ULJ1 636 aa10.37□□□□□ -0.75
CSTF1-206ENST00000493039 TRIP12Q14669 1992 aaPredicted RBP10.36□□□□□ -0.75
CSTF1-206ENST00000493039 ADGRA3Q8IWK6 1321 aa10.36□□□□□ -0.75
CSTF1-206ENST00000493039 BIN1O00499 593 aa10.36□□□□□ -0.75
CSTF1-206ENST00000493039 RHOBTB3O94955 611 aa10.36□□□□□ -0.75
CSTF1-206ENST00000493039 CASP5P51878 434 aa10.36□□□□□ -0.75
CSTF1-206ENST00000493039 COASYQ13057 564 aa10.36□□□□□ -0.75
CSTF1-206ENST00000493039 SNX17Q15036 470 aa10.36□□□□□ -0.75
CSTF1-206ENST00000493039 DNTTIP2Q5QJE6 756 aaKnown RBP10.36□□□□□ -0.75
CSTF1-206ENST00000493039 SFR1Q86XK3 245 aa10.36□□□□□ -0.75
CSTF1-206ENST00000493039 FAM126BQ8IXS8 530 aa10.36□□□□□ -0.75
CSTF1-206ENST00000493039 ZNF668Q96K58 619 aaPredicted RBP10.36□□□□□ -0.75
CSTF1-206ENST00000493039 GSDMAQ96QA5 445 aa10.36□□□□□ -0.75
CSTF1-206ENST00000493039 NTPCRQ9BSD7 190 aaKnown RBP10.36□□□□□ -0.75
CSTF1-206ENST00000493039 LRRC27Q9C0I9 530 aa10.36□□□□□ -0.75
CSTF1-206ENST00000493039 POLR3FQ9H1D9 316 aaPredicted RBP10.36□□□□□ -0.75
CSTF1-206ENST00000493039 CDHR5Q9HBB8 845 aa10.36□□□□□ -0.75
CSTF1-206ENST00000493039 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms