RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 ARHGAP26Q9UNA1 814 aa5.78□□□□□ -1.48
FN1-224ENST00000492816 SLC9A3R1O14745 358 aaPredicted RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 NKRFO15226 690 aaKnown RBP eCLIP5.77□□□□□ -1.492e-17■□□□□ 8.6
FN1-224ENST00000492816 SGSM2O43147 1006 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 H2AFYO75367 372 aaKnown RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 CCNB2O95067 398 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 ALPPL2P10696 532 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 GNG11P61952 73 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 SP3Q02447 781 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 MED21Q13503 144 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 RSBN1LQ6PCB5 846 aaPredicted RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 ERO1BQ86YB8 467 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 CMTR1Q8N1G2 835 aaKnown RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 MRRFQ96E11 262 aaKnown RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 HES6Q96HZ4 224 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 RNPC3Q96LT9 517 aaKnown RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 RAB17Q9H0T7 212 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 CACNA2D2Q9NY47 1150 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 STK39Q9UEW8 545 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 SRP68Q9UHB9 627 aaKnown RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 MLYCDO95822 493 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 IRF1P10914 325 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 NCALDP61601 193 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 SUN3Q8TAQ9 357 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 VMP1Q96GC9 406 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 TDRD3Q9H7E2 651 aaKnown RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 CTTNBP2Q8WZ74 1663 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 AP1G2O75843 785 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 HIST1H2AGP0C0S8 130 aaPredicted RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 HIST1H2ADP20671 130 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 GRK3P35626 688 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 SLC9A5Q14940 896 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 SUZ12Q15022 739 aaKnown RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 HP1BP3Q5SSJ5 553 aaPredicted RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 GPR158Q5T848 1215 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 KDELC2Q7Z4H8 507 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 ZNF513Q8N8E2 541 aaPredicted RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 AFAP1L1Q8TED9 768 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 ZNF653Q96CK0 615 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 MTBPQ96DY7 904 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 INTS4Q96HW7 963 aaKnown RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 HIST1H2AHQ96KK5 128 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 HIST1H2AJQ99878 128 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 H2AFJQ9BTM1 129 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 PCDHGB3Q9Y5G1 929 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 TLDC2A0PJX2 215 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 SPDYE5A6NIY4 337 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 GTF2E2P29084 291 aaKnown RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 STX17P56962 302 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 RPL10AP62906 217 aaKnown RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 CDC37Q16543 378 aaPredicted RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 SPDYE7PQ495Y7 208 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 TTC31Q49AM3 519 aaPredicted RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 ERAP2Q6P179 960 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 TEX13BQ9BXU2 312 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 USP18Q9UMW8 372 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 PSMC2P35998 433 aaKnown RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 MAP2K5Q13163 448 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 SNW1Q13573 536 aaKnown RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 HERC6Q8IVU3 1022 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 FAM186BQ8IYM0 893 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 RIPOR3Q96MK2 946 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 IDI2Q9BXS1 227 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 DNAJC17Q9NVM6 304 aaKnown RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 ASAP1Q9ULH1 1129 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 IGSF9BQ9UPX0 1349 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 TUBB4AP04350 444 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 TAS2R42Q7RTR8 314 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 PEX26Q7Z412 305 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 NEK9Q8TD19 979 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 SCFD2Q8WU76 684 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 ZNF496Q96IT1 587 aaPredicted RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 EGFL8Q99944 293 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 ALG6Q9Y672 507 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 KIF21AQ7Z4S6 1674 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 TLL1O43897 1013 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 CUTAO60888 179 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 GGPS1O95749 300 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 KRT14P02533 472 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 HPGDP15428 266 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 CTNNB1P35222 781 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 FAM83BQ5T0W9 1011 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 ZC3H14Q6PJT7 736 aaKnown RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 CHST13Q8NET6 341 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 MCOLN3Q8TDD5 553 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 ZKSCAN4Q969J2 545 aaPredicted RBP5.77□□□□□ -1.49
FN1-224ENST00000492816 STK33Q9BYT3 514 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 MROH8Q9H579 483 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 TNFSF13BQ9Y275 285 aa5.77□□□□□ -1.49
FN1-224ENST00000492816 TUBBP07437 444 aa5.76□□□□□ -1.49
FN1-224ENST00000492816 ITGAXP20702 1163 aa5.76□□□□□ -1.49
FN1-224ENST00000492816 HPDP32754 393 aaPredicted RBP5.76□□□□□ -1.49
FN1-224ENST00000492816 MAPK9P45984 424 aa5.76□□□□□ -1.49
FN1-224ENST00000492816 EFNA5P52803 228 aa5.76□□□□□ -1.49
FN1-224ENST00000492816 NSUN2Q08J23 767 aaKnown RBP eCLIP5.76□□□□□ -1.49
FN1-224ENST00000492816 CDH18Q13634 790 aa5.76□□□□□ -1.49
FN1-224ENST00000492816 PKN2Q16513 984 aaKnown RBP5.76□□□□□ -1.49
FN1-224ENST00000492816 PAN2Q504Q3 1202 aaKnown RBP5.76□□□□□ -1.49
FN1-224ENST00000492816 SYCP2LQ5T4T6 812 aa5.76□□□□□ -1.49
FN1-224ENST00000492816 CREB3L3Q68CJ9 461 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms