RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 SAMM50Q9Y512 469 aa14.03□□□□□ -0.16
PRAME-213ENST00000492657 KIF13BQ9NQT8 1826 aa14.03□□□□□ -0.16
PRAME-213ENST00000492657 EIF2AK2P19525 551 aaKnown RBP14.03□□□□□ -0.16
PRAME-213ENST00000492657 JAM2P57087 298 aa14.03□□□□□ -0.16
PRAME-213ENST00000492657 MEI1Q5TIA1 1274 aa14.03□□□□□ -0.16
PRAME-213ENST00000492657 ALKBH5Q6P6C2 394 aaKnown RBP14.03□□□□□ -0.16
PRAME-213ENST00000492657 LUC7LQ9NQ29 371 aaKnown RBP14.03□□□□□ -0.16
PRAME-213ENST00000492657 PCDHGC5Q9Y5F6 944 aa14.03□□□□□ -0.16
PRAME-213ENST00000492657 ZC3H4Q9UPT8 1303 aaKnown RBP14.02□□□□□ -0.16
PRAME-213ENST00000492657 DDX3XO00571 662 aaKnown RBP eCLIP14.02□□□□□ -0.162e-11■■□□□ 13.8
PRAME-213ENST00000492657 LRRN2O75325 713 aa14.02□□□□□ -0.16
PRAME-213ENST00000492657 SETQ01105 290 aaPredicted RBP14.02□□□□□ -0.16
PRAME-213ENST00000492657 MAP3K10Q02779 954 aa14.02□□□□□ -0.16
PRAME-213ENST00000492657 MAP9Q49MG5 647 aa14.02□□□□□ -0.16
PRAME-213ENST00000492657 LRRC31Q6UY01 552 aa14.02□□□□□ -0.16
PRAME-213ENST00000492657 MSL3Q8N5Y2 521 aaKnown RBP14.02□□□□□ -0.16
PRAME-213ENST00000492657 PRPF38AQ8NAV1 312 aaKnown RBP14.02□□□□□ -0.16
PRAME-213ENST00000492657 ZSWIM2Q8NEG5 633 aa14.02□□□□□ -0.16
PRAME-213ENST00000492657 TEPSINQ96N21 525 aa14.02□□□□□ -0.16
PRAME-213ENST00000492657 DMAC2Q9NW81 257 aa14.02□□□□□ -0.16
PRAME-213ENST00000492657 ZHX2Q9Y6X8 837 aa14.02□□□□□ -0.16
PRAME-213ENST00000492657 SYF2O95926 243 aaKnown RBP14.02□□□□□ -0.17
PRAME-213ENST00000492657 FMO5P49326 533 aa14.02□□□□□ -0.17
PRAME-213ENST00000492657 TKFCQ3LXA3 575 aa14.02□□□□□ -0.17
PRAME-213ENST00000492657 TTC19Q6DKK2 380 aaPredicted RBP14.02□□□□□ -0.17
PRAME-213ENST00000492657 CIAPIN1Q6FI81 312 aa14.02□□□□□ -0.17
PRAME-213ENST00000492657 HS2ST1Q7LGA3 356 aa14.02□□□□□ -0.17
PRAME-213ENST00000492657 SYCP3Q8IZU3 236 aa14.02□□□□□ -0.17
PRAME-213ENST00000492657 SYTL5Q8TDW5 730 aaPredicted RBP14.02□□□□□ -0.17
PRAME-213ENST00000492657 FZD1Q9UP38 647 aa14.02□□□□□ -0.17
PRAME-213ENST00000492657 ZSCAN5CA6NGD5 496 aaPredicted RBP14.01□□□□□ -0.17
PRAME-213ENST00000492657 RNF40O75150 1001 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 MYCLP12524 364 aaPredicted RBP14.01□□□□□ -0.17
PRAME-213ENST00000492657 MCM3P25205 808 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 SAMD7Q7Z3H4 446 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 U2AF1L4Q8WU68 220 aaKnown RBP14.01□□□□□ -0.17
PRAME-213ENST00000492657 WNK4Q96J92 1243 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 RIT2Q99578 217 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 MED4Q9NPJ6 270 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 RPTORQ8N122 1335 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 TMCO5BA8MYB1 307 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 K7ENM7 598 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 ATP9AO75110 1047 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 FLOT1O75955 427 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 PRKCIP41743 596 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 DLG4P78352 724 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 UGCGQ16739 394 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 TTC31Q49AM3 519 aaPredicted RBP14.01□□□□□ -0.17
PRAME-213ENST00000492657 SND1Q7KZF4 910 aaKnown RBP eCLIP14.01□□□□□ -0.177e-51■□□□□ 8.8
PRAME-213ENST00000492657 KCTD17Q8N5Z5 321 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 AENQ8WTP8 325 aaKnown RBP14.01□□□□□ -0.17
PRAME-213ENST00000492657 AGO4Q9HCK5 861 aaKnown RBP14.01□□□□□ -0.17
PRAME-213ENST00000492657 DNAJC12Q9UKB3 198 aa14.01□□□□□ -0.17
PRAME-213ENST00000492657 ESYT3A0FGR9 886 aa14□□□□□ -0.17
PRAME-213ENST00000492657 EXOC3O60645 756 aa14□□□□□ -0.17
PRAME-213ENST00000492657 GUCY2CP25092 1073 aa14□□□□□ -0.17
PRAME-213ENST00000492657 RPS6P62753 249 aaKnown RBP14□□□□□ -0.17
PRAME-213ENST00000492657 ITIH3Q06033 890 aa14□□□□□ -0.17
PRAME-213ENST00000492657 DRAP1Q14919 205 aaPredicted RBP14□□□□□ -0.17
PRAME-213ENST00000492657 CFAP221Q4G0U5 840 aa14□□□□□ -0.17
PRAME-213ENST00000492657 PRAMEF18Q5VWM3 479 aa14□□□□□ -0.17
PRAME-213ENST00000492657 ICE2Q659A1 982 aa14□□□□□ -0.17
PRAME-213ENST00000492657 GOLGA6L1Q8N7Z2 621 aa14□□□□□ -0.17
PRAME-213ENST00000492657 PROCA1Q8NCQ7 364 aaPredicted RBP14□□□□□ -0.17
PRAME-213ENST00000492657 OLIG1Q8TAK6 271 aa14□□□□□ -0.17
PRAME-213ENST00000492657 GPRC5CQ9NQ84 441 aa14□□□□□ -0.17
PRAME-213ENST00000492657 SEL1LQ9UBV2 794 aa14□□□□□ -0.17
PRAME-213ENST00000492657 ODF2LQ9ULJ1 636 aa14□□□□□ -0.17
PRAME-213ENST00000492657 EVI5O60447 810 aa14□□□□□ -0.17
PRAME-213ENST00000492657 PPP1R37O75864 691 aa14□□□□□ -0.17
PRAME-213ENST00000492657 GLI1P08151 1106 aa14□□□□□ -0.17
PRAME-213ENST00000492657 GGCXP38435 758 aa14□□□□□ -0.17
PRAME-213ENST00000492657 ARHGAP44Q17R89 818 aa14□□□□□ -0.17
PRAME-213ENST00000492657 CCDC70Q6NSX1 233 aa14□□□□□ -0.17
PRAME-213ENST00000492657 LNX1Q8TBB1 728 aaPredicted RBP14□□□□□ -0.17
PRAME-213ENST00000492657 STRA6Q9BX79 667 aa14□□□□□ -0.17
PRAME-213ENST00000492657 DEFB129Q9H1M3 183 aa14□□□□□ -0.17
PRAME-213ENST00000492657 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14□□□□□ -0.173e-8■■■■■ 50.7
PRAME-213ENST00000492657 FRMD4BQ9Y2L6 1034 aa14□□□□□ -0.17
PRAME-213ENST00000492657 UBIAD1Q9Y5Z9 338 aa14□□□□□ -0.17
PRAME-213ENST00000492657 BZW2Q9Y6E2 419 aaKnown RBP14□□□□□ -0.17
PRAME-213ENST00000492657 GTPBP10A4D1E9 387 aaKnown RBP14□□□□□ -0.17
PRAME-213ENST00000492657 AGPSO00116 658 aa14□□□□□ -0.17
PRAME-213ENST00000492657 P4HBP07237 508 aaKnown RBP14□□□□□ -0.17
PRAME-213ENST00000492657 MTMR2Q13614 643 aa14□□□□□ -0.17
PRAME-213ENST00000492657 TRADDQ15628 312 aa14□□□□□ -0.17
PRAME-213ENST00000492657 C8orf74Q6P047 294 aa14□□□□□ -0.17
PRAME-213ENST00000492657 GLYCTKQ8IVS8 523 aa14□□□□□ -0.17
PRAME-213ENST00000492657 INPP4AQ96PE3 977 aaPredicted RBP14□□□□□ -0.17
PRAME-213ENST00000492657 INTS2Q9H0H0 1204 aaKnown RBP14□□□□□ -0.17
PRAME-213ENST00000492657 SLC38A10Q9HBR0 1119 aa14□□□□□ -0.17
PRAME-213ENST00000492657 STIM2Q9P246 746 aa14□□□□□ -0.17
PRAME-213ENST00000492657 NENFQ9UMX5 172 aa14□□□□□ -0.17
PRAME-213ENST00000492657 KCNK3O14649 394 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 WDR46O15213 610 aaKnown RBP13.99□□□□□ -0.17
PRAME-213ENST00000492657 PPP1R12BO60237 982 aaPredicted RBP13.99□□□□□ -0.17
PRAME-213ENST00000492657 STAT1P42224 750 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 RARRES1P49788 294 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 MTMR1Q13613 665 aa13.99□□□□□ -0.17
PRAME-213ENST00000492657 KRT12Q99456 494 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms