RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 RNF38Q9H0F5 515 aa3.76□□□□□ -1.81
SNX13-209ENST00000492626 CRTAC1Q9NQ79 661 aa3.76□□□□□ -1.81
SNX13-209ENST00000492626 DNAJC28Q9NX36 388 aa3.76□□□□□ -1.81
SNX13-209ENST00000492626 LAMB2P55268 1798 aa3.76□□□□□ -1.81
SNX13-209ENST00000492626 AKAP11Q9UKA4 1901 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 SCDO00767 359 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 MSCO60682 206 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 LCP1P13796 627 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 SLC9A1P19634 815 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 GMPRP36959 345 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 CTSKP43235 329 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 PPM1FP49593 454 aaPredicted RBP3.75□□□□□ -1.81
SNX13-209ENST00000492626 SNRPNP63162 240 aaKnown RBP3.75□□□□□ -1.81
SNX13-209ENST00000492626 SAFBQ15424 915 aaKnown RBP eCLIP3.75□□□□□ -1.81
SNX13-209ENST00000492626 ALYREFQ86V81 257 aaKnown RBP3.75□□□□□ -1.81
SNX13-209ENST00000492626 CAMKK1Q8N5S9 505 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 CLRN3Q8NCR9 226 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 MAP3K14Q99558 947 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 FAM83CQ9BQN1 747 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 RHOBTB2Q9BYZ6 727 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 LRRC4CQ9HCJ2 640 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 DSEQ9UL01 958 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 FAM50BQ9Y247 325 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 NPFFR2Q9Y5X5 522 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 COL5A2P05997 1499 aaPredicted RBP3.75□□□□□ -1.81
SNX13-209ENST00000492626 SHISA3A0PJX4 238 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 GSC2O15499 205 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 SLC5A3P53794 718 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 MROH9Q5TGP6 573 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 ABHD17CQ6PCB6 329 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 OSTM1Q86WC4 334 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 LZTR1Q8N653 840 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 C1orf162Q8NEQ5 155 aaPredicted RBP3.75□□□□□ -1.81
SNX13-209ENST00000492626 FCRL2Q96LA5 508 aaPredicted RBP3.75□□□□□ -1.81
SNX13-209ENST00000492626 JAM3Q9BX67 310 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 TRIM8Q9BZR9 551 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 RIC8BQ9NVN3 520 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 USP36Q9P275 1121 aaKnown RBP3.75□□□□□ -1.81
SNX13-209ENST00000492626 TMEFF2Q9UIK5 374 aaPredicted RBP3.75□□□□□ -1.81
SNX13-209ENST00000492626 RAXQ9Y2V3 346 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 TAF6LQ9Y6J9 622 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 GPRASP1Q5JY77 1395 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 PRAMEF25A6NGN4 478 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 FGF10O15520 208 aaPredicted RBP3.75□□□□□ -1.81
SNX13-209ENST00000492626 CAPNS1P04632 268 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 RPLP2P05387 115 aaKnown RBP3.75□□□□□ -1.81
SNX13-209ENST00000492626 PCBP2Q15366 365 aaKnown RBP eCLIP3.75□□□□□ -1.81
SNX13-209ENST00000492626 COBLL1Q53SF7 1204 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 ESPNLQ6ZVH7 1005 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 MCMBPQ9BTE3 642 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 C1QTNF1Q9BXJ1 281 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 AP5M1Q9H0R1 490 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 C1GALT1Q9NS00 363 aa3.75□□□□□ -1.81
SNX13-209ENST00000492626 WTIPA6NIX2 430 aaPredicted RBP3.74□□□□□ -1.81
SNX13-209ENST00000492626 C22orf46C9J442 243 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 CEACAM5P06731 702 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 CKMP06732 381 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 COL6A2P12110 1019 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 LBX1P52954 281 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 MBTPS1Q14703 1052 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 TESK1Q15569 626 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 Q6ZS46 218 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 TEX2Q8IWB9 1127 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 ENAHQ8N8S7 591 aaPredicted RBP3.74□□□□□ -1.81
SNX13-209ENST00000492626 WHAMMQ8TF30 809 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 MFSD14AQ96MC6 490 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 SCN7AQ01118 1682 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 CFAP65Q6ZU64 1925 aaKnown RBP3.74□□□□□ -1.81
SNX13-209ENST00000492626 KCPQ6ZWJ8 1503 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 WNT9AO14904 365 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 AP1G1O43747 822 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 APOL3O95236 402 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 FUCA1P04066 466 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 OVCH1Q7RTY7 1134 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 CTU1Q7Z7A3 348 aaKnown RBP3.74□□□□□ -1.81
SNX13-209ENST00000492626 TRIM48Q8IWZ4 208 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 KCNH7Q9NS40 1196 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 BSDC1Q9NW68 430 aaPredicted RBP3.74□□□□□ -1.81
SNX13-209ENST00000492626 TNFRSF10DQ9UBN6 386 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 ADGRE2Q9UHX3 823 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 DBR1Q9UK59 544 aaKnown RBP3.74□□□□□ -1.81
SNX13-209ENST00000492626 TRAF5O00463 557 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 TRIM27P14373 513 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 PHKG2P15735 406 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 GRAMD1BQ3KR37 738 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 FIGNQ5HY92 759 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 LINC00114Q6XXX2 140 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 PTRH1Q86Y79 214 aaKnown RBP3.74□□□□□ -1.81
SNX13-209ENST00000492626 SVIPQ8NHG7 77 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 NETO1Q8TDF5 533 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 DDX11Q96FC9 970 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 CCDC120Q96HB5 630 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 UBA5Q9GZZ9 404 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 PCDHA11Q9Y5I1 949 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 FER1L6Q2WGJ9 1857 aa3.74□□□□□ -1.81
SNX13-209ENST00000492626 ACEP12821 1306 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 TOGARAM1Q9Y4F4 1720 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 PRR33A8MZF0 331 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 K7ESF4 209 aa3.73□□□□□ -1.81
SNX13-209ENST00000492626 LACTBP83111 547 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms