RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	TMEM161A	Q9NX61	479 aa		6.27	□□□□□ -1.41
SEC13-219	ENST00000492602	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	6.27	□□□□□ -1.41
SEC13-219	ENST00000492602	IRAK3	Q9Y616	596 aa		6.27	□□□□□ -1.41
SEC13-219	ENST00000492602	SDK1	Q7Z5N4	2213 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	C2orf16	Q68DN1	1984 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	FREM2	Q5SZK8	3169 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	TSPY2	A6NKD2	308 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602		J3QKU1	62 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	INPPL1	O15357	1258 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	NMT2	O60551	498 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	HSPD1	P10809	573 aa	Known RBP	6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	MARK3	P27448	753 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	CXCL12	P48061	93 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	ALDH7A1	P49419	539 aa	Known RBP	6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	SATB1	Q01826	763 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	SP4	Q02446	784 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	UBE3C	Q15386	1083 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	HEATR6	Q6AI08	1181 aa	Known RBP	6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	GIMAP6	Q6P9H5	292 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	CYFIP1	Q7L576	1253 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	LONP2	Q86WA8	852 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	MCF2L2	Q86YR7	1114 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	CMAS	Q8NFW8	434 aa	Predicted RBP	6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	SSH3	Q8TE77	659 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	SLC39A7	Q92504	469 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	SMG7	Q92540	1137 aa	Known RBP	6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	PHKB	Q93100	1093 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	STRBP	Q96SI9	672 aa	Known RBP	6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	EDEM2	Q9BV94	578 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	EMILIN2	Q9BXX0	1053 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	CELF4	Q9BZC1	486 aa	Known RBP	6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	CHRD	Q9H2X0	955 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	MAN1C1	Q9NR34	630 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	IL17RB	Q9NRM6	502 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	PAG1	Q9NWQ8	432 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	NDRG2	Q9UN36	371 aa	Known RBP	6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	GINS2	Q9Y248	185 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	MRPS17	Q9Y2R5	130 aa	Known RBP	6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	TENM4	Q6N022	2769 aa		6.26	□□□□□ -1.41
SEC13-219	ENST00000492602	TICRR	Q7Z2Z1	1910 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	MBLAC1	A4D2B0	266 aa	Predicted RBP	6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	HOXA2	O43364	376 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	RPS6KA5	O75582	802 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	RFPL2	O75678	378 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	EPN2	O95208	641 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	CFB	P00751	764 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	CAPNS1	P04632	268 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	APP	P05067	770 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	RPLP2	P05387	115 aa	Known RBP	6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	POLG	P54098	1239 aa	Predicted RBP	6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	BCAR1	P56945	870 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	KRT76	Q01546	638 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	SLFN5	Q08AF3	891 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	SCAP	Q12770	1279 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	NEDD9	Q14511	834 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	MARCH8	Q5T0T0	291 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	TCEAL6	Q6IPX3	200 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	METTL7B	Q6UX53	244 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	CYP26C1	Q6V0L0	522 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	MAMSTR	Q6ZN01	415 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	TMEM173	Q86WV6	379 aa	Predicted RBP	6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	TMEFF1	Q8IYR6	380 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	TCEAL3	Q969E4	200 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	PDCD2L	Q9BRP1	358 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	MAF1	Q9H063	256 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	BCL11A	Q9H165	835 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	BOLA2	Q9H3K6	86 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	ELAC1	Q9H777	363 aa	Known RBP	6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	HEBP1	Q9NRV9	189 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	NOP58	Q9Y2X3	529 aa	Known RBP	6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	NOC2L	Q9Y3T9	749 aa	Known RBP	6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	TELO2	Q9Y4R8	837 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	SPTA1	P02549	2419 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	LOXHD1	Q8IVV2	1947 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	ABCB11	O95342	1321 aa		6.25	□□□□□ -1.41
SEC13-219	ENST00000492602	SSB	P05455	408 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	SLC3A2	P08195	630 aa	Known RBP	6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	CNP	P09543	421 aa	Known RBP	6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	CSRP1	P21291	193 aa	Known RBP	6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	MPL	P40238	635 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	FAM189B	P81408	668 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	FGD1	P98174	961 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	PGM5	Q15124	567 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	PLA2G2C	Q5R387	149 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	ELMSAN1	Q6PJG2	1045 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	DDX53	Q86TM3	631 aa	Known RBP	6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	VSIG10L	Q86VR7	867 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	RNF169	Q8NCN4	708 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	DEFB124	Q8NES8	71 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	CLUAP1	Q96AJ1	413 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	LOXL4	Q96JB6	756 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	UBL7	Q96S82	380 aa	Predicted RBP	6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	IER2	Q9BTL4	223 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	RHOBTB2	Q9BYZ6	727 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	CLMP	Q9H6B4	373 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	LMAN1L	Q9HAT1	526 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	IL1RAPL2	Q9NP60	686 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	VPS45	Q9NRW7	570 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	RNF19A	Q9NV58	838 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms