RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 PUF60Q9UHX1 559 aaKnown RBP14.9□□□□□ -0.02
HDAC3-213ENST00000492506 NR2E1Q9Y466 385 aa14.9□□□□□ -0.02
HDAC3-213ENST00000492506 HCFC2Q9Y5Z7 792 aa14.9□□□□□ -0.02
HDAC3-213ENST00000492506 C2orf16Q68DN1 1984 aa14.89□□□□□ -0.03
HDAC3-213ENST00000492506 MEIS1O00470 390 aa14.89□□□□□ -0.03
HDAC3-213ENST00000492506 SGSM2O43147 1006 aa14.89□□□□□ -0.03
HDAC3-213ENST00000492506 PRC1O43663 620 aa14.89□□□□□ -0.03
HDAC3-213ENST00000492506 GPR32O75388 356 aa14.89□□□□□ -0.03
HDAC3-213ENST00000492506 PBX3P40426 434 aa14.89□□□□□ -0.03
HDAC3-213ENST00000492506 CRYBB1P53674 252 aaPredicted RBP14.89□□□□□ -0.03
HDAC3-213ENST00000492506 KIZQ2M2Z5 673 aa14.89□□□□□ -0.03
HDAC3-213ENST00000492506 CEP55Q53EZ4 464 aa14.89□□□□□ -0.03
HDAC3-213ENST00000492506 ODR4Q5SWX8 454 aa14.89□□□□□ -0.03
HDAC3-213ENST00000492506 RUFY2Q8WXA3 655 aa14.89□□□□□ -0.03
HDAC3-213ENST00000492506 PGBD1Q96JS3 809 aa14.89□□□□□ -0.03
HDAC3-213ENST00000492506 OSMRQ99650 979 aa14.89□□□□□ -0.03
HDAC3-213ENST00000492506 ADAM7Q9H2U9 754 aa14.89□□□□□ -0.03
HDAC3-213ENST00000492506 C2orf71A6NGG8 1288 aa14.88□□□□□ -0.03
HDAC3-213ENST00000492506 GOLGA6L22H0YM25 854 aa14.88□□□□□ -0.03
HDAC3-213ENST00000492506 DHX15O43143 795 aaKnown RBP14.88□□□□□ -0.03
HDAC3-213ENST00000492506 C22orf31O95567 290 aa14.88□□□□□ -0.03
HDAC3-213ENST00000492506 ZNF484Q5JVG2 852 aa14.88□□□□□ -0.03
HDAC3-213ENST00000492506 SASS6Q6UVJ0 657 aa14.88□□□□□ -0.03
HDAC3-213ENST00000492506 TMTC3Q6ZXV5 915 aa14.88□□□□□ -0.03
HDAC3-213ENST00000492506 RAB11FIP4Q86YS3 637 aa14.88□□□□□ -0.03
HDAC3-213ENST00000492506 TMTC2Q8N394 836 aa14.88□□□□□ -0.03
HDAC3-213ENST00000492506 CCDC82Q8N4S0 544 aa14.88□□□□□ -0.03
HDAC3-213ENST00000492506 MRPL43Q8N983 215 aaKnown RBP14.88□□□□□ -0.03
HDAC3-213ENST00000492506 IPO4Q8TEX9 1081 aaKnown RBP14.88□□□□□ -0.03
HDAC3-213ENST00000492506 CASP10Q92851 521 aa14.88□□□□□ -0.03
HDAC3-213ENST00000492506 ZNF558Q96NG5 402 aa14.88□□□□□ -0.03
HDAC3-213ENST00000492506 NECTIN4Q96NY8 510 aa14.88□□□□□ -0.03
HDAC3-213ENST00000492506 PPP1R16BQ96T49 567 aa14.88□□□□□ -0.03
HDAC3-213ENST00000492506 CLASP2O75122 1294 aaKnown RBP14.87□□□□□ -0.03
HDAC3-213ENST00000492506 VTNP04004 478 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 ASGR2P07307 311 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 PPM1AP35813 382 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 LIFRP42702 1097 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 ITIH3Q06033 890 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 TPRNQ4KMQ1 711 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 CLLU1OSQ5K130 101 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 WWC2Q6AWC2 1192 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 ASTLQ6HA08 431 aaPredicted RBP14.87□□□□□ -0.03
HDAC3-213ENST00000492506 CASC1Q6TDU7 716 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 TMC7Q7Z402 723 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 HEATR3Q7Z4Q2 680 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 HSCBQ8IWL3 235 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 SLC39A11Q8N1S5 342 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 LRRC43Q8N309 656 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 TMEM87BQ96K49 555 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 RIC8AQ9NPQ8 531 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 SPG21Q9NZD8 308 aa14.87□□□□□ -0.03
HDAC3-213ENST00000492506 RBM8AQ9Y5S9 174 aaKnown RBP14.87□□□□□ -0.03
HDAC3-213ENST00000492506 CCDC69A6NI79 296 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 DDX39AO00148 427 aaKnown RBP14.86□□□□□ -0.03
HDAC3-213ENST00000492506 BACH1O14867 736 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 WEE2P0C1S8 567 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 CALM1P0DP23 149 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 CALM2P0DP24 149 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 CALM3P0DP25 149 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 SREBF1P36956 1147 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 CLCN5P51795 746 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 KRT17Q04695 432 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 SMC1AQ14683 1233 aaKnown RBP14.86□□□□□ -0.03
HDAC3-213ENST00000492506 FAM160B1Q5W0V3 765 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 CES5AQ6NT32 575 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 PDXDC2PQ6P474 469 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 NFXL1Q6ZNB6 911 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 FRMD5Q7Z6J6 570 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 TEX2Q8IWB9 1127 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 ZDHHC14Q8IZN3 488 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 LINC01465Q8N7H1 131 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 FANCBQ8NB91 859 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 FEZF2Q8TBJ5 459 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 ANO3Q9BYT9 981 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 ZNF302Q9NR11 478 aa14.86□□□□□ -0.03
HDAC3-213ENST00000492506 EP300Q09472 2414 aaPredicted RBP14.86□□□□□ -0.03
HDAC3-213ENST00000492506 IGLV3-22A0A075B6J6 115 aa14.85□□□□□ -0.03
HDAC3-213ENST00000492506 FAM86B1E9PN63 330 aa14.85□□□□□ -0.03
HDAC3-213ENST00000492506 HOXA2O43364 376 aa14.85□□□□□ -0.03
HDAC3-213ENST00000492506 FOSP01100 380 aaPredicted RBP14.85□□□□□ -0.03
HDAC3-213ENST00000492506 FAM86B2P0C5J1 330 aa14.85□□□□□ -0.03
HDAC3-213ENST00000492506 MTHFRP42898 656 aa14.85□□□□□ -0.03
HDAC3-213ENST00000492506 RBM25P49756 843 aaKnown RBP14.85□□□□□ -0.03
HDAC3-213ENST00000492506 CLK2P49760 499 aaKnown RBP14.85□□□□□ -0.03
HDAC3-213ENST00000492506 CWF19L1Q69YN2 538 aaKnown RBP14.85□□□□□ -0.03
HDAC3-213ENST00000492506 SWSAP1Q6NVH7 229 aa14.85□□□□□ -0.03
HDAC3-213ENST00000492506 KANK3Q6NY19 840 aa14.85□□□□□ -0.03
HDAC3-213ENST00000492506 NIPA1Q7RTP0 329 aa14.85□□□□□ -0.03
HDAC3-213ENST00000492506 ZNF598Q86UK7 904 aaKnown RBP14.85□□□□□ -0.03
HDAC3-213ENST00000492506 ECHDC2Q86YB7 292 aa14.85□□□□□ -0.03
HDAC3-213ENST00000492506 C12orf76Q8N812 135 aaPredicted RBP14.85□□□□□ -0.03
HDAC3-213ENST00000492506 CRYGNQ8WXF5 182 aa14.85□□□□□ -0.03
HDAC3-213ENST00000492506 ADAMTS10Q9H324 1103 aa14.85□□□□□ -0.03
HDAC3-213ENST00000492506 LIMD1Q9UGP4 676 aa14.85□□□□□ -0.03
HDAC3-213ENST00000492506 NOL7Q9UMY1 257 aaKnown RBP14.85□□□□□ -0.03
HDAC3-213ENST00000492506 MAFBQ9Y5Q3 323 aaPredicted RBP14.85□□□□□ -0.03
HDAC3-213ENST00000492506 CNTNAP5Q8WYK1 1306 aa14.85□□□□□ -0.03
HDAC3-213ENST00000492506 NASPP49321 788 aaPredicted RBP14.84□□□□□ -0.03
HDAC3-213ENST00000492506 FUT2Q10981 343 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms