RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 DCDC2CA8MYV0 355 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 HIP1RO75146 1068 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 USP11P51784 963 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 PRAMEF18Q5VWM3 479 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ALS2CLQ60I27 953 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 PLA2G4FQ68DD2 849 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 TMEM179Q6ZVK1 233 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ZNF668Q96K58 619 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 HEMGNQ9BXL5 484 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 TMEM39BQ9GZU3 492 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 FAM198AQ9UFP1 575 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ROBO1Q9Y6N7 1651 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 DOT1LQ8TEK3 1739 aa16.48■□□□□ 0.23
TNFRSF1B-203ENST00000492361 hCG_1984214I3L0E3 225 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 POLRMTO00411 1230 aaKnown RBP16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 FGFR4P22455 802 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ALDH1B1P30837 517 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 DLGAP5Q15398 846 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 XKR9Q5GH70 373 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 DAB2IPQ5VWQ8 1189 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ZNF713Q8N859 430 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 SLC35C1Q96A29 364 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 PI4K2AQ9BTU6 479 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ASIC3Q9UHC3 531 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ACSL3O95573 720 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CDK17Q00537 523 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 SYT2Q8N9I0 419 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 LRRC45Q96CN5 670 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 IQCDQ96DY2 449 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CBWD1Q9BRT8 395 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 FZD1Q9UP38 647 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 MARCKSL1P49006 195 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 IRF2BP2Q7Z5L9 587 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 INTS2Q9H0H0 1204 aaKnown RBP16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 GANQ9H2C0 597 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 METTL14Q9HCE5 456 aaKnown RBP16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 RAVER2Q9HCJ3 691 aaKnown RBP16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 DAAM1Q9Y4D1 1078 aa16.47■□□□□ 0.23
TNFRSF1B-203ENST00000492361 IPO5O00410 1097 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CYP26A1O43174 497 aa16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 AARSP49588 968 aaKnown RBP eCLIP16.46■□□□□ 0.234e-6■■■■■ 30.6
TNFRSF1B-203ENST00000492361 ZKSCAN8Q15776 578 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ZCWPW2Q504Y3 356 aa16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 STXBP4Q6ZWJ1 553 aa16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 SH3BP5LQ7L8J4 393 aa16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 COL23A1Q86Y22 540 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 PASD1Q8IV76 773 aa16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 RPUSD2Q8IZ73 545 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 CCT8L2Q96SF2 557 aa16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 GAKO14976 1311 aa16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 FMO5P49326 533 aa16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ACTN3Q08043 901 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 BIRC3Q13489 604 aa16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 GRIPAP1Q4V328 841 aa16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 FAM182AQ5T1J6 154 aa16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ATP6V1G3Q96LB4 118 aa16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 FMO2Q99518 471 aa16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 ZNF277Q9NRM2 450 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 PNMA2Q9UL42 364 aa16.46■□□□□ 0.23
TNFRSF1B-203ENST00000492361 FOXO6A8MYZ6 492 aa16.46■□□□□ 0.22
TNFRSF1B-203ENST00000492361 CTNND1O60716 968 aaKnown RBP16.46■□□□□ 0.22
TNFRSF1B-203ENST00000492361 DR1Q01658 176 aa16.46■□□□□ 0.22
TNFRSF1B-203ENST00000492361 SF3B2Q13435 895 aaKnown RBP16.46■□□□□ 0.22
TNFRSF1B-203ENST00000492361 TNIP1Q15025 636 aa16.46■□□□□ 0.22
TNFRSF1B-203ENST00000492361 PADI6Q6TGC4 694 aa16.46■□□□□ 0.22
TNFRSF1B-203ENST00000492361 DPH6Q7L8W6 267 aa16.46■□□□□ 0.22
TNFRSF1B-203ENST00000492361 C1orf54Q8WWF1 131 aa16.46■□□□□ 0.22
TNFRSF1B-203ENST00000492361 FERP16591 822 aa16.45■□□□□ 0.22
TNFRSF1B-203ENST00000492361 RDXP35241 583 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1B-203ENST00000492361 TMEM132AQ24JP5 1023 aa16.45■□□□□ 0.22
TNFRSF1B-203ENST00000492361 C18orf8Q96DM3 657 aa16.45■□□□□ 0.22
TNFRSF1B-203ENST00000492361 WDR11Q9BZH6 1224 aa16.45■□□□□ 0.22
TNFRSF1B-203ENST00000492361 IGSF9BQ9UPX0 1349 aa16.45■□□□□ 0.22
TNFRSF1B-203ENST00000492361 TULP2O00295 520 aa16.45■□□□□ 0.22
TNFRSF1B-203ENST00000492361 NPR1P16066 1061 aa16.45■□□□□ 0.22
TNFRSF1B-203ENST00000492361 HNRNPH3P31942 346 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1B-203ENST00000492361 CORO7P57737 925 aa16.45■□□□□ 0.22
TNFRSF1B-203ENST00000492361 E2F5Q15329 346 aa16.45■□□□□ 0.22
TNFRSF1B-203ENST00000492361 KAZNQ674X7 775 aa16.45■□□□□ 0.22
TNFRSF1B-203ENST00000492361 SPIRE2Q8WWL2 714 aa16.45■□□□□ 0.22
TNFRSF1B-203ENST00000492361 NAP1L4Q99733 375 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1B-203ENST00000492361 WDR18Q9BV38 432 aa16.45■□□□□ 0.22
TNFRSF1B-203ENST00000492361 HOXD13P35453 343 aa16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 SOX5P35711 763 aa16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 RRP1BQ14684 758 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 ASTE1Q2TB18 679 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 FRMD5Q7Z6J6 570 aa16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 PNMA8AQ86V59 439 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 INPP4AQ96PE3 977 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 TOPORSQ9NS56 1045 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 ASTN1O14525 1302 aa16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 CASZ1Q86V15 1759 aa16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 PDXKO00764 312 aa16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 PPP1R37O75864 691 aa16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 SLITRK3O94933 977 aa16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 DHX38Q92620 1227 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 KRT35Q92764 455 aa16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 ZNF653Q96CK0 615 aa16.44■□□□□ 0.22
TNFRSF1B-203ENST00000492361 TEKT3Q9BXF9 490 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms