RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 COL1A2P08123 1366 aa16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 GRXCR2A6NFK2 248 aa16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 H3BQ06 376 aaPredicted RBP16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 M0QZ92 97 aa16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 MARCH6O60337 910 aa16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 HBP1O60381 514 aa16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 PSAPP07602 524 aa16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 FXR2P51116 673 aaKnown RBP eCLIP16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 PAK2Q13177 524 aa16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 CAMK1Q14012 370 aa16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 ARL6IP4Q66PJ3 421 aaKnown RBP16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 PTCRAQ6ISU1 281 aaPredicted RBP16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 NPAS4Q8IUM7 802 aa16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 KIAA0319LQ8IZA0 1049 aa16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 NME8Q8N427 588 aa16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 ZNF302Q9NR11 478 aa16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 DISC1Q9NRI5 854 aa16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 CEP131Q9UPN4 1083 aa16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 MRPL42Q9Y6G3 142 aaKnown RBP16.82■□□□□ 0.28
CDC42SE1-205ENST00000491825 BACH1O14867 736 aa16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 CHMP2AO43633 222 aa16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 KLRC1P26715 233 aa16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 LTBRP36941 435 aa16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 TXKP42681 527 aa16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 TMEM266Q2M3C6 531 aa16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 CTC1Q2NKJ3 1217 aa16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 FAM160B1Q5W0V3 765 aa16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 PDXDC2PQ6P474 469 aa16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 MIER3Q7Z3K6 550 aa16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 CMTR2Q8IYT2 770 aaKnown RBP16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 TMEM40Q8WWA1 233 aa16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 PLVAPQ9BX97 442 aa16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 DAXXQ9UER7 740 aaPredicted RBP16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 ZDHHC9Q9Y397 364 aa16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 MAFBQ9Y5Q3 323 aaPredicted RBP16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 NLRC5Q86WI3 1866 aa16.81■□□□□ 0.28
CDC42SE1-205ENST00000491825 MYH9P35579 1960 aaKnown RBP16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 MGEA5O60502 916 aa16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 C22orf31O95567 290 aa16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 NUCB2P80303 420 aa16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 HYAL1Q12794 435 aa16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 SF3A1Q15459 793 aaKnown RBP16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 PUS10Q3MIT2 529 aaKnown RBP16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 ZNF484Q5JVG2 852 aa16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 ATL3Q6DD88 541 aa16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 SWSAP1Q6NVH7 229 aa16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 FAM173BQ6P4H8 233 aa16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 GJD3Q8N144 294 aa16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 P2RX5Q93086 422 aa16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 LRFN3Q9BTN0 628 aa16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 CDHR5Q9HBB8 845 aa16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 ERVK-5Q9HDB9 667 aa16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 NOC2LQ9Y3T9 749 aaKnown RBP16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 SAMM50Q9Y512 469 aa16.8■□□□□ 0.28
CDC42SE1-205ENST00000491825 KAT6AQ92794 2004 aa16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 PI4K2BG5E9Z4 385 aa16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 EML1O00423 815 aa16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 NASPP49321 788 aaPredicted RBP16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 GATMP50440 423 aa16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 PTPAQ15257 358 aa16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 EPHA7Q15375 998 aa16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 FAM43BQ6ZT52 329 aaPredicted RBP16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 IGSF22Q8N9C0 903 aa16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 BBXQ8WY36 941 aaPredicted RBP16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 ZNF396Q96N95 335 aaPredicted RBP16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 USP28Q96RU2 1077 aa16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 RAB34Q9BZG1 259 aa16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 CLDND1Q9NY35 253 aa16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 CIZ1Q9ULV3 898 aaPredicted RBP16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 PLAGL2Q9UPG8 496 aa16.79■□□□□ 0.28
CDC42SE1-205ENST00000491825 ATG2AQ2TAZ0 1938 aa16.78■□□□□ 0.28
CDC42SE1-205ENST00000491825 POTEMA6NI47 508 aa16.78■□□□□ 0.28
CDC42SE1-205ENST00000491825 GPR37L1O60883 481 aa16.78■□□□□ 0.28
CDC42SE1-205ENST00000491825 ITGB1P05556 798 aa16.78■□□□□ 0.28
CDC42SE1-205ENST00000491825 STAG3L1P0CL83 205 aa16.78■□□□□ 0.28
CDC42SE1-205ENST00000491825 DNAJB1P25685 340 aa16.78■□□□□ 0.28
CDC42SE1-205ENST00000491825 DLX2Q07687 328 aaPredicted RBP16.78■□□□□ 0.28
CDC42SE1-205ENST00000491825 PDIA5Q14554 519 aa16.78■□□□□ 0.28
CDC42SE1-205ENST00000491825 NCAPH2Q6IBW4 605 aa16.78■□□□□ 0.28
CDC42SE1-205ENST00000491825 DTHD1Q6ZMT9 781 aa16.78■□□□□ 0.28
CDC42SE1-205ENST00000491825 LINC01465Q8N7H1 131 aa16.78■□□□□ 0.28
CDC42SE1-205ENST00000491825 ALG13Q9NP73 1137 aaKnown RBP16.78■□□□□ 0.28
CDC42SE1-205ENST00000491825 GABBR1Q9UBS5 961 aa16.78■□□□□ 0.28
CDC42SE1-205ENST00000491825 ATP6V1DQ9Y5K8 247 aa16.78■□□□□ 0.28
CDC42SE1-205ENST00000491825 CLIC4Q9Y696 253 aa16.78■□□□□ 0.28
CDC42SE1-205ENST00000491825 NCK2O43639 380 aa16.77■□□□□ 0.28
CDC42SE1-205ENST00000491825 TBX10O75333 385 aa16.77■□□□□ 0.28
CDC42SE1-205ENST00000491825 GPR32O75388 356 aa16.77■□□□□ 0.28
CDC42SE1-205ENST00000491825 RPS6KA5O75582 802 aa16.77■□□□□ 0.28
CDC42SE1-205ENST00000491825 P4HBP07237 508 aaKnown RBP16.77■□□□□ 0.28
CDC42SE1-205ENST00000491825 GTF2F1P35269 517 aaKnown RBP eCLIP16.77■□□□□ 0.289e-8■■■□□ 17.1
CDC42SE1-205ENST00000491825 TECP42680 631 aa16.77■□□□□ 0.28
CDC42SE1-205ENST00000491825 SARSP49591 514 aaKnown RBP16.77■□□□□ 0.28
CDC42SE1-205ENST00000491825 PSMC5P62195 406 aa16.77■□□□□ 0.28
CDC42SE1-205ENST00000491825 NFX1Q12986 1120 aaKnown RBP16.77■□□□□ 0.28
CDC42SE1-205ENST00000491825 PAN2Q504Q3 1202 aaKnown RBP16.77■□□□□ 0.28
CDC42SE1-205ENST00000491825 NAALADL2Q58DX5 795 aa16.77■□□□□ 0.28
CDC42SE1-205ENST00000491825 TMEM31Q5JXX7 168 aa16.77■□□□□ 0.28
CDC42SE1-205ENST00000491825 FOXD4L5Q5VV16 416 aaPredicted RBP16.77■□□□□ 0.28
CDC42SE1-205ENST00000491825 FAM228AQ86W67 206 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms