RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 CDC25AP30304 524 aa25.91■■□□□ 1.74
CPNE9-204ENST00000491802 ECM1Q16610 540 aa25.91■■□□□ 1.74
CPNE9-204ENST00000491802 FOXD4L5Q5VV16 416 aaPredicted RBP25.91■■□□□ 1.74
CPNE9-204ENST00000491802 TMCO2Q7Z6W1 182 aaPredicted RBP25.91■■□□□ 1.74
CPNE9-204ENST00000491802 NLRP7Q8WX94 980 aa25.91■■□□□ 1.74
CPNE9-204ENST00000491802 FOXD4L4Q8WXT5 416 aaPredicted RBP25.91■■□□□ 1.74
CPNE9-204ENST00000491802 TMEM143Q96AN5 459 aa25.91■■□□□ 1.74
CPNE9-204ENST00000491802 MTRQ99707 1265 aa25.91■■□□□ 1.74
CPNE9-204ENST00000491802 FTHL17Q9BXU8 183 aa25.91■■□□□ 1.74
CPNE9-204ENST00000491802 ATP6V0A4Q9HBG4 840 aa25.91■■□□□ 1.74
CPNE9-204ENST00000491802 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.9■■□□□ 1.74
CPNE9-204ENST00000491802 PDIA4P13667 645 aaKnown RBP25.9■■□□□ 1.74
CPNE9-204ENST00000491802 CDC42EP1Q00587 391 aa25.9■■□□□ 1.74
CPNE9-204ENST00000491802 NFX1Q12986 1120 aaKnown RBP25.9■■□□□ 1.74
CPNE9-204ENST00000491802 RHPN2Q8IUC4 686 aa25.9■■□□□ 1.74
CPNE9-204ENST00000491802 MYOCDQ8IZQ8 938 aa25.9■■□□□ 1.74
CPNE9-204ENST00000491802 PSPC1Q8WXF1 523 aaKnown RBP25.9■■□□□ 1.74
CPNE9-204ENST00000491802 SLC28A3Q9HAS3 691 aa25.9■■□□□ 1.74
CPNE9-204ENST00000491802 ERVK-5Q9HDB9 667 aa25.9■■□□□ 1.74
CPNE9-204ENST00000491802 XPNPEP1Q9NQW7 623 aa25.9■■□□□ 1.74
CPNE9-204ENST00000491802 DBR1Q9UK59 544 aaKnown RBP25.9■■□□□ 1.74
CPNE9-204ENST00000491802 MYO9BQ13459 2157 aa25.9■■□□□ 1.74
CPNE9-204ENST00000491802 USO1O60763 962 aaKnown RBP25.89■■□□□ 1.74
CPNE9-204ENST00000491802 DGAT1O75907 488 aa25.89■■□□□ 1.74
CPNE9-204ENST00000491802 ZSCAN22P10073 491 aaPredicted RBP25.89■■□□□ 1.74
CPNE9-204ENST00000491802 PKP1Q13835 747 aa25.89■■□□□ 1.74
CPNE9-204ENST00000491802 BECN1Q14457 450 aa25.89■■□□□ 1.74
CPNE9-204ENST00000491802 ODR4Q5SWX8 454 aa25.89■■□□□ 1.74
CPNE9-204ENST00000491802 FAM228AQ86W67 206 aa25.89■■□□□ 1.74
CPNE9-204ENST00000491802 TCP11Q8WWU5 503 aa25.89■■□□□ 1.74
CPNE9-204ENST00000491802 TOP1MTQ969P6 601 aa25.89■■□□□ 1.74
CPNE9-204ENST00000491802 NLRP4Q96MN2 994 aa25.89■■□□□ 1.74
CPNE9-204ENST00000491802 MMTAG2Q9BU76 263 aaKnown RBP25.89■■□□□ 1.74
CPNE9-204ENST00000491802 NKX2-4Q9H2Z4 354 aa25.89■■□□□ 1.74
CPNE9-204ENST00000491802 DDX19AQ9NUU7 478 aaKnown RBP25.89■■□□□ 1.74
CPNE9-204ENST00000491802 KIAA1024Q9UPX6 916 aa25.89■■□□□ 1.74
CPNE9-204ENST00000491802 STXBP5LQ9Y2K9 1186 aa25.89■■□□□ 1.74
CPNE9-204ENST00000491802 COL4A3BPQ9Y5P4 624 aa25.89■■□□□ 1.74
CPNE9-204ENST00000491802 ARHGEF35A5YM69 484 aa25.88■■□□□ 1.73
CPNE9-204ENST00000491802 EIF4BP23588 611 aaKnown RBP25.88■■□□□ 1.73
CPNE9-204ENST00000491802 CEBPZQ03701 1054 aaKnown RBP25.88■■□□□ 1.73
CPNE9-204ENST00000491802 PTPAQ15257 358 aa25.88■■□□□ 1.73
CPNE9-204ENST00000491802 KSR1Q8IVT5 923 aa25.88■■□□□ 1.73
CPNE9-204ENST00000491802 LINC01599Q8WXQ3 324 aa25.88■■□□□ 1.73
CPNE9-204ENST00000491802 USP28Q96RU2 1077 aa25.88■■□□□ 1.73
CPNE9-204ENST00000491802 RAD9AQ99638 391 aa25.88■■□□□ 1.73
CPNE9-204ENST00000491802 ST3GAL5Q9UNP4 418 aa25.88■■□□□ 1.73
CPNE9-204ENST00000491802 A0A087WZ62 844 aa25.87■■□□□ 1.73
CPNE9-204ENST00000491802 GPR182O15218 404 aa25.87■■□□□ 1.73
CPNE9-204ENST00000491802 TLL1O43897 1013 aa25.87■■□□□ 1.73
CPNE9-204ENST00000491802 DARSP14868 501 aaKnown RBP25.87■■□□□ 1.73
CPNE9-204ENST00000491802 MYOGP15173 224 aa25.87■■□□□ 1.73
CPNE9-204ENST00000491802 HTRA4P83105 476 aaPredicted RBP25.87■■□□□ 1.73
CPNE9-204ENST00000491802 ZRSR1Q15695 479 aaKnown RBP25.87■■□□□ 1.73
CPNE9-204ENST00000491802 FAM117BQ6P1L5 589 aa25.87■■□□□ 1.73
CPNE9-204ENST00000491802 ZNF410Q86VK4 478 aa25.87■■□□□ 1.73
CPNE9-204ENST00000491802 FDXACB1Q9BRP7 624 aaPredicted RBP25.87■■□□□ 1.73
CPNE9-204ENST00000491802 GCOM2Q9BZD3 368 aaPredicted RBP25.87■■□□□ 1.73
CPNE9-204ENST00000491802 TMX1Q9H3N1 280 aa25.87■■□□□ 1.73
CPNE9-204ENST00000491802 F13A1P00488 732 aa25.86■■□□□ 1.73
CPNE9-204ENST00000491802 GRIN1Q05586 938 aa25.86■■□□□ 1.73
CPNE9-204ENST00000491802 PRPF31Q8WWY3 499 aaKnown RBP25.86■■□□□ 1.73
CPNE9-204ENST00000491802 AK8Q96MA6 479 aa25.86■■□□□ 1.73
CPNE9-204ENST00000491802 CDX2Q99626 313 aaPredicted RBP25.86■■□□□ 1.73
CPNE9-204ENST00000491802 ZBED2Q9BTP6 218 aa25.86■■□□□ 1.73
CPNE9-204ENST00000491802 CHD7Q9P2D1 2997 aa25.86■■□□□ 1.73
CPNE9-204ENST00000491802 MYH15Q9Y2K3 1946 aa25.86■■□□□ 1.73
CPNE9-204ENST00000491802 ENPP3O14638 875 aa25.85■■□□□ 1.73
CPNE9-204ENST00000491802 CA3P07451 260 aa25.85■■□□□ 1.73
CPNE9-204ENST00000491802 MARCKSP29966 332 aaPredicted RBP25.85■■□□□ 1.73
CPNE9-204ENST00000491802 LAMTOR4Q0VGL1 99 aa25.85■■□□□ 1.73
CPNE9-204ENST00000491802 GRIN2CQ14957 1233 aa25.85■■□□□ 1.73
CPNE9-204ENST00000491802 PPP2R2DQ66LE6 453 aa25.85■■□□□ 1.73
CPNE9-204ENST00000491802 PADI6Q6TGC4 694 aa25.85■■□□□ 1.73
CPNE9-204ENST00000491802 SP7Q8TDD2 431 aaPredicted RBP25.85■■□□□ 1.73
CPNE9-204ENST00000491802 FAM161BQ96MY7 647 aa25.85■■□□□ 1.73
CPNE9-204ENST00000491802 TSPYL2Q9H2G4 693 aaPredicted RBP25.85■■□□□ 1.73
CPNE9-204ENST00000491802 BHMT2Q9H2M3 363 aa25.85■■□□□ 1.73
CPNE9-204ENST00000491802 INSL6Q9Y581 213 aa25.85■■□□□ 1.73
CPNE9-204ENST00000491802 CSDE1O75534 798 aaKnown RBP25.84■■□□□ 1.73
CPNE9-204ENST00000491802 FGFR4P22455 802 aa25.84■■□□□ 1.73
CPNE9-204ENST00000491802 LONP1P36776 959 aaKnown RBP25.84■■□□□ 1.73
CPNE9-204ENST00000491802 MAEAQ7L5Y9 396 aa25.84■■□□□ 1.73
CPNE9-204ENST00000491802 CABP7Q86V35 215 aa25.84■■□□□ 1.73
CPNE9-204ENST00000491802 MCPH1Q8NEM0 835 aa25.84■■□□□ 1.73
CPNE9-204ENST00000491802 CDK5RAP3Q96JB5 506 aa25.84■■□□□ 1.73
CPNE9-204ENST00000491802 POLR3FQ9H1D9 316 aaPredicted RBP25.84■■□□□ 1.73
CPNE9-204ENST00000491802 E9PMD0 336 aa25.83■■□□□ 1.73
CPNE9-204ENST00000491802 MGEA5O60502 916 aa25.83■■□□□ 1.73
CPNE9-204ENST00000491802 UPP2O95045 317 aa25.83■■□□□ 1.73
CPNE9-204ENST00000491802 HYIQ5T013 277 aa25.83■■□□□ 1.73
CPNE9-204ENST00000491802 KCNK18Q7Z418 384 aa25.83■■□□□ 1.73
CPNE9-204ENST00000491802 CRIPAKQ8N1N5 446 aa25.83■■□□□ 1.73
CPNE9-204ENST00000491802 RNF149Q8NC42 400 aa25.83■■□□□ 1.73
CPNE9-204ENST00000491802 ASAP3Q8TDY4 903 aa25.83■■□□□ 1.73
CPNE9-204ENST00000491802 ZNF396Q96N95 335 aaPredicted RBP25.83■■□□□ 1.73
CPNE9-204ENST00000491802 PNMA5Q96PV4 448 aa25.83■■□□□ 1.73
CPNE9-204ENST00000491802 GPRC5CQ9NQ84 441 aa25.83■■□□□ 1.73
CPNE9-204ENST00000491802 FBXO2Q9UK22 296 aaPredicted RBP25.83■■□□□ 1.73
CPNE9-204ENST00000491802 DNM3Q9UQ16 869 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms