RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	CASC1	Q6TDU7	716 aa		21.89	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	TEX2	Q8IWB9	1127 aa		21.89	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	SIX5	Q8N196	739 aa		21.89	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	BBX	Q8WY36	941 aa	Predicted RBP	21.89	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	MRPL9	Q9BYD2	267 aa	Known RBP	21.89	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	IRAK3	Q9Y616	596 aa		21.89	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	MED19	A0JLT2	244 aa	Predicted RBP	21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	CCDC69	A6NI79	296 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	NT5C1B-RDH14	C9J2C7	533 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	C22orf31	O95567	290 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	CCNE2	O96020	404 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	CALM1	P0DP23	149 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	CALM2	P0DP24	149 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	CALM3	P0DP25	149 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	EPCAM	P16422	314 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	BCAR1	P56945	870 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	PTH1R	Q03431	593 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	PUM1	Q14671	1186 aa	Known RBP eCLIP	21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	CLLU1OS	Q5K130	101 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	TMC5	Q6UXY8	1006 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	HEATR3	Q7Z4Q2	680 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	PPFIBP1	Q86W92	1011 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	CCDC60	Q8IWA6	550 aa	Predicted RBP	21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	MTA3	Q9BTC8	594 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	DUSP12	Q9UNI6	340 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	EVPL	Q92817	2033 aa		21.88	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334		A0A0U1RQF3	1178 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	hCG_1642624	A0A1W2PR95	340 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	DDX39A	O00148	427 aa	Known RBP	21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	MAGEB2	O15479	319 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	EIF4B	P23588	611 aa	Known RBP	21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	TMOD1	P28289	359 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	ZNF76	P36508	570 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	POLG	P54098	1239 aa	Predicted RBP	21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	NLRP11	P59045	1033 aa	Known RBP	21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	AAMP	Q13685	434 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	CCDC149	Q6ZUS6	474 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	GPR149	Q86SP6	731 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	MB21D2	Q8IYB1	491 aa	Predicted RBP	21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	KIAA2013	Q8IYS2	634 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	CCDC82	Q8N4S0	544 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	HELQ	Q8TDG4	1101 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	SLC22A17	Q8WUG5	538 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	ZBP1	Q9H171	429 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	KCNK12	Q9HB15	430 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	CEP131	Q9UPN4	1083 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	TAF6L	Q9Y6J9	622 aa		21.87	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	NCOR2	Q9Y618	2525 aa		21.86	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	DMXL1	Q9Y485	3027 aa		21.86	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	SPDYE4	A6NLX3	237 aa		21.86	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	CTSA	P10619	480 aa		21.86	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	ATP4A	P20648	1035 aa		21.86	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	NIPA1	Q7RTP0	329 aa		21.86	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	DDX53	Q86TM3	631 aa	Known RBP	21.86	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	RSPH1	Q8WYR4	309 aa		21.86	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	MAP7D2	Q96T17	732 aa		21.86	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	IGSF9	Q9P2J2	1179 aa		21.86	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	AKT3	Q9Y243	479 aa		21.86	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	EPG5	Q9HCE0	2579 aa		21.85	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	AUTS2	Q8WXX7	1259 aa		21.85	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	ADAMTS10	Q9H324	1103 aa		21.85	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	SFXN1	Q9H9B4	322 aa		21.85	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	RIC8A	Q9NPQ8	531 aa		21.85	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	DACT1	Q9NYF0	836 aa		21.85	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	WNT16	Q9UBV4	365 aa		21.85	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	MAFB	Q9Y5Q3	323 aa	Predicted RBP	21.85	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	RFX1	P22670	979 aa		21.84	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	NONO	Q15233	471 aa	Known RBP eCLIP	21.84	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	EFCAB12	Q6NXP0	572 aa		21.84	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	TRMT1L	Q7Z2T5	733 aa	Known RBP	21.84	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	ZNF598	Q86UK7	904 aa	Known RBP	21.84	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	TMEM87B	Q96K49	555 aa		21.84	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	TPR	P12270	2363 aa	Known RBP	21.84	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	CEP250	Q9BV73	2442 aa		21.83	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	PRC1	O43663	620 aa		21.83	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	RXRA	P19793	462 aa		21.83	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	CLCN3	P51790	818 aa		21.83	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	ZC3H14	Q6PJT7	736 aa	Known RBP	21.83	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	PLA2G4D	Q86XP0	818 aa		21.83	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	FANCB	Q8NB91	859 aa		21.83	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	PGBD1	Q96JS3	809 aa		21.83	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	HINFP	Q9BQA5	517 aa		21.83	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	ANO3	Q9BYT9	981 aa		21.83	■■□□□ 1.09
CDK5RAP2-218	ENST00000491334	DHX15	O43143	795 aa	Known RBP	21.82	■■□□□ 1.08
CDK5RAP2-218	ENST00000491334	ZC3H11A	O75152	810 aa	Known RBP eCLIP	21.82	■■□□□ 1.08
CDK5RAP2-218	ENST00000491334	MCM5	P33992	734 aa		21.82	■■□□□ 1.08
CDK5RAP2-218	ENST00000491334	SREBF1	P36956	1147 aa		21.82	■■□□□ 1.08
CDK5RAP2-218	ENST00000491334	NAPA	P54920	295 aa		21.82	■■□□□ 1.08
CDK5RAP2-218	ENST00000491334	LETM2	Q2VYF4	491 aa		21.82	■■□□□ 1.08
CDK5RAP2-218	ENST00000491334	IGSF21	Q96ID5	467 aa		21.82	■■□□□ 1.08
CDK5RAP2-218	ENST00000491334	TBC1D22B	Q9NU19	505 aa		21.82	■■□□□ 1.08
CDK5RAP2-218	ENST00000491334	STK39	Q9UEW8	545 aa		21.82	■■□□□ 1.08
CDK5RAP2-218	ENST00000491334	SLC12A7	Q9Y666	1083 aa		21.82	■■□□□ 1.08
CDK5RAP2-218	ENST00000491334		R4GN57	208 aa		21.82	■■□□□ 1.08
CDK5RAP2-218	ENST00000491334	IPO5	O00410	1097 aa	Known RBP	21.81	■■□□□ 1.08
CDK5RAP2-218	ENST00000491334	IGHD	P01880	384 aa		21.81	■■□□□ 1.08
CDK5RAP2-218	ENST00000491334	PSAP	P07602	524 aa		21.81	■■□□□ 1.08
CDK5RAP2-218	ENST00000491334	DARS	P14868	501 aa	Known RBP	21.81	■■□□□ 1.08
CDK5RAP2-218	ENST00000491334	KLRC2	P26717	231 aa		21.81	■■□□□ 1.08

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms