RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 CPLX2Q6PUV4 134 aaKnown RBP17.7■□□□□ 0.42
SMPD4-220ENST00000491319 B3GNT9Q6UX72 402 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 ADHFE1Q8IWW8 467 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 COLGALT1Q8NBJ5 622 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 RDM1Q8NG50 284 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 MBOAT7Q96N66 472 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 SCLT1Q96NL6 688 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 SH2D3AQ9BRG2 576 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 CWH43Q9H720 699 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 ELAC1Q9H777 363 aaKnown RBP17.7■□□□□ 0.42
SMPD4-220ENST00000491319 AAASQ9NRG9 546 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 RNF19AQ9NV58 838 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 TYW1Q9NV66 732 aaKnown RBP17.7■□□□□ 0.42
SMPD4-220ENST00000491319 CD207Q9UJ71 328 aa17.7■□□□□ 0.42
SMPD4-220ENST00000491319 SLC37A4O43826 429 aa17.69■□□□□ 0.42
SMPD4-220ENST00000491319 FGF18O76093 207 aa17.69■□□□□ 0.42
SMPD4-220ENST00000491319 FGFR4P22455 802 aa17.69■□□□□ 0.42
SMPD4-220ENST00000491319 NRIP1P48552 1158 aa17.69■□□□□ 0.42
SMPD4-220ENST00000491319 MOXD1Q6UVY6 613 aa17.69■□□□□ 0.42
SMPD4-220ENST00000491319 KRT25Q7Z3Z0 450 aa17.69■□□□□ 0.42
SMPD4-220ENST00000491319 RBM23Q86U06 439 aaKnown RBP17.69■□□□□ 0.42
SMPD4-220ENST00000491319 THNSL1Q8IYQ7 743 aa17.69■□□□□ 0.42
SMPD4-220ENST00000491319 MSLNLQ96KJ4 702 aa17.69■□□□□ 0.42
SMPD4-220ENST00000491319 CEP89Q96ST8 783 aa17.69■□□□□ 0.42
SMPD4-220ENST00000491319 C19orf67A6NJJ6 358 aa17.68■□□□□ 0.42
SMPD4-220ENST00000491319 STBD1O95210 358 aa17.68■□□□□ 0.42
SMPD4-220ENST00000491319 GLP2RO95838 553 aa17.68■□□□□ 0.42
SMPD4-220ENST00000491319 DARSP14868 501 aaKnown RBP17.68■□□□□ 0.42
SMPD4-220ENST00000491319 ZSCAN20P17040 1043 aaPredicted RBP17.68■□□□□ 0.42
SMPD4-220ENST00000491319 UBE3AQ05086 875 aa17.68■□□□□ 0.42
SMPD4-220ENST00000491319 GALNT17Q6IS24 598 aa17.68■□□□□ 0.42
SMPD4-220ENST00000491319 FAM177A1Q8N128 213 aaPredicted RBP17.68■□□□□ 0.42
SMPD4-220ENST00000491319 EFHBQ8N7U6 833 aa17.68■□□□□ 0.42
SMPD4-220ENST00000491319 NLRP7Q8WX94 980 aa17.68■□□□□ 0.42
SMPD4-220ENST00000491319 CASD1Q96PB1 797 aa17.68■□□□□ 0.42
SMPD4-220ENST00000491319 PHF20Q9BVI0 1012 aa17.68■□□□□ 0.42
SMPD4-220ENST00000491319 TMEM117Q9H0C3 514 aa17.68■□□□□ 0.42
SMPD4-220ENST00000491319 TLR9Q9NR96 1032 aa17.68■□□□□ 0.42
SMPD4-220ENST00000491319 CLEC1BQ9P126 229 aa17.68■□□□□ 0.42
SMPD4-220ENST00000491319 DDX25Q9UHL0 483 aaKnown RBP17.68■□□□□ 0.42
SMPD4-220ENST00000491319 BARX2Q9UMQ3 279 aaPredicted RBP17.68■□□□□ 0.42
SMPD4-220ENST00000491319 CSDE1O75534 798 aaKnown RBP17.67■□□□□ 0.42
SMPD4-220ENST00000491319 LAG3P18627 525 aa17.67■□□□□ 0.42
SMPD4-220ENST00000491319 PLA2G5P39877 138 aa17.67■□□□□ 0.42
SMPD4-220ENST00000491319 LETM2Q2VYF4 491 aa17.67■□□□□ 0.42
SMPD4-220ENST00000491319 XKR3Q5GH77 459 aa17.67■□□□□ 0.42
SMPD4-220ENST00000491319 LRRC55Q6ZSA7 311 aa17.67■□□□□ 0.42
SMPD4-220ENST00000491319 ECHDC2Q86YB7 292 aa17.67■□□□□ 0.42
SMPD4-220ENST00000491319 ZNF710Q8N1W2 664 aa17.67■□□□□ 0.42
SMPD4-220ENST00000491319 MICAL1Q8TDZ2 1067 aa17.67■□□□□ 0.42
SMPD4-220ENST00000491319 NIFKQ9BYG3 293 aaKnown RBP17.67■□□□□ 0.42
SMPD4-220ENST00000491319 SLKQ9H2G2 1235 aaPredicted RBP17.67■□□□□ 0.42
SMPD4-220ENST00000491319 GJB4Q9NTQ9 266 aa17.67■□□□□ 0.42
SMPD4-220ENST00000491319 TPCN1Q9ULQ1 816 aa17.67■□□□□ 0.42
SMPD4-220ENST00000491319 HCN4Q9Y3Q4 1203 aa17.67■□□□□ 0.42
SMPD4-220ENST00000491319 STK36Q9NRP7 1315 aa17.67■□□□□ 0.42
SMPD4-220ENST00000491319 IGKV6-21A0A0C4DH24 114 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 CCDC194A0A1B0GVG4 234 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 EML1O00423 815 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 PER2O15055 1255 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 HOXA2O43364 376 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 DCXO43602 365 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 CDKL5O76039 1030 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 NEFLP07196 543 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 ALADP13716 330 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 PBX3P40426 434 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 ERVFC1P60507 584 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 RBM10P98175 930 aaKnown RBP17.66■□□□□ 0.42
SMPD4-220ENST00000491319 CSPP1Q1MSJ5 1256 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 CLLU1OSQ5K130 101 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 PLA2G4FQ68DD2 849 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 LRRC43Q8N309 656 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 RNF169Q8NCN4 708 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 SMRP1Q8NCR6 262 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 TLE6Q9H808 572 aa17.66■□□□□ 0.42
SMPD4-220ENST00000491319 TECTAO75443 2155 aa17.65■□□□□ 0.42
SMPD4-220ENST00000491319 FSCN2O14926 492 aa17.65■□□□□ 0.42
SMPD4-220ENST00000491319 PFKFB2O60825 505 aa17.65■□□□□ 0.42
SMPD4-220ENST00000491319 EYA4O95677 639 aa17.65■□□□□ 0.42
SMPD4-220ENST00000491319 ATF7P17544 494 aaPredicted RBP17.65■□□□□ 0.42
SMPD4-220ENST00000491319 PLPP4Q5VZY2 271 aa17.65■□□□□ 0.42
SMPD4-220ENST00000491319 ANO5Q75V66 913 aa17.65■□□□□ 0.42
SMPD4-220ENST00000491319 ABI1Q8IZP0 508 aa17.65■□□□□ 0.42
SMPD4-220ENST00000491319 VN1R2Q8NFZ6 395 aa17.65■□□□□ 0.42
SMPD4-220ENST00000491319 OXER1Q8TDS5 423 aa17.65■□□□□ 0.42
SMPD4-220ENST00000491319 POP1Q99575 1024 aaKnown RBP17.65■□□□□ 0.42
SMPD4-220ENST00000491319 KCNMB3Q9NPA1 279 aa17.65■□□□□ 0.42
SMPD4-220ENST00000491319 VAV3Q9UKW4 847 aa17.65■□□□□ 0.42
SMPD4-220ENST00000491319 ZNF318Q5VUA4 2279 aa17.64■□□□□ 0.41
SMPD4-220ENST00000491319 A0A087WZ62 844 aa17.64■□□□□ 0.41
SMPD4-220ENST00000491319 A0A0U1RQF3 1178 aa17.64■□□□□ 0.41
SMPD4-220ENST00000491319 DDX11L8A8MPP1 907 aa17.64■□□□□ 0.41
SMPD4-220ENST00000491319 PRR33A8MZF0 331 aa17.64■□□□□ 0.41
SMPD4-220ENST00000491319 CTDNEP1O95476 244 aa17.64■□□□□ 0.41
SMPD4-220ENST00000491319 PSMC5P62195 406 aa17.64■□□□□ 0.41
SMPD4-220ENST00000491319 COASYQ13057 564 aa17.64■□□□□ 0.41
SMPD4-220ENST00000491319 PPP2R5CQ13362 524 aa17.64■□□□□ 0.41
SMPD4-220ENST00000491319 KCNT2Q6UVM3 1135 aa17.64■□□□□ 0.41
SMPD4-220ENST00000491319 PIK3AP1Q6ZUJ8 805 aa17.64■□□□□ 0.41
SMPD4-220ENST00000491319 NEK8Q86SG6 692 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms