RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 MUC3AQ02505 3323 aa20.22■□□□□ 0.83
HMGN1-219ENST00000491183 BTBD18B2RXH4 712 aa20.21■□□□□ 0.83
HMGN1-219ENST00000491183 MAFO75444 373 aaPredicted RBP20.21■□□□□ 0.83
HMGN1-219ENST00000491183 MMP1P03956 469 aa20.21■□□□□ 0.83
HMGN1-219ENST00000491183 DARSP14868 501 aaKnown RBP20.21■□□□□ 0.83
HMGN1-219ENST00000491183 FGFR4P22455 802 aa20.21■□□□□ 0.83
HMGN1-219ENST00000491183 KCNA5P22460 613 aa20.21■□□□□ 0.83
HMGN1-219ENST00000491183 DNAJB1P25685 340 aa20.21■□□□□ 0.83
HMGN1-219ENST00000491183 QARSP47897 775 aaKnown RBP20.21■□□□□ 0.83
HMGN1-219ENST00000491183 FOSBP53539 338 aa20.21■□□□□ 0.83
HMGN1-219ENST00000491183 PLA2G4FQ68DD2 849 aa20.21■□□□□ 0.83
HMGN1-219ENST00000491183 ZNF579Q8NAF0 562 aaKnown RBP20.21■□□□□ 0.83
HMGN1-219ENST00000491183 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.21■□□□□ 0.83
HMGN1-219ENST00000491183 ELAC1Q9H777 363 aaKnown RBP20.21■□□□□ 0.83
HMGN1-219ENST00000491183 TMEM161AQ9NX61 479 aa20.21■□□□□ 0.83
HMGN1-219ENST00000491183 TBKBP1A7MCY6 615 aa20.2■□□□□ 0.82
HMGN1-219ENST00000491183 CSDE1O75534 798 aaKnown RBP20.2■□□□□ 0.82
HMGN1-219ENST00000491183 ITGB1P05556 798 aa20.2■□□□□ 0.82
HMGN1-219ENST00000491183 P4HBP07237 508 aaKnown RBP20.2■□□□□ 0.82
HMGN1-219ENST00000491183 FGFR1P11362 822 aa20.2■□□□□ 0.82
HMGN1-219ENST00000491183 NPEPPSP55786 919 aa20.2■□□□□ 0.82
HMGN1-219ENST00000491183 SPIRE1Q08AE8 756 aa20.2■□□□□ 0.82
HMGN1-219ENST00000491183 COL19A1Q14993 1142 aa20.2■□□□□ 0.82
HMGN1-219ENST00000491183 EPHA7Q15375 998 aa20.2■□□□□ 0.82
HMGN1-219ENST00000491183 LEXMQ3ZCV2 418 aa20.2■□□□□ 0.82
HMGN1-219ENST00000491183 KLHL23Q8NBE8 558 aa20.2■□□□□ 0.82
HMGN1-219ENST00000491183 SPPL3Q8TCT6 385 aa20.2■□□□□ 0.82
HMGN1-219ENST00000491183 KIF2CQ99661 725 aa20.2■□□□□ 0.82
HMGN1-219ENST00000491183 ATP6V0A4Q9HBG4 840 aa20.2■□□□□ 0.82
HMGN1-219ENST00000491183 BRMS1Q9HCU9 246 aa20.2■□□□□ 0.82
HMGN1-219ENST00000491183 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-219ENST00000491183 WNT7AO00755 349 aa20.19■□□□□ 0.82
HMGN1-219ENST00000491183 MARCH6O60337 910 aa20.19■□□□□ 0.82
HMGN1-219ENST00000491183 C8orf34Q49A92 452 aa20.19■□□□□ 0.82
HMGN1-219ENST00000491183 NAALADL2Q58DX5 795 aa20.19■□□□□ 0.82
HMGN1-219ENST00000491183 DIS3L2Q8IYB7 885 aaKnown RBP20.19■□□□□ 0.82
HMGN1-219ENST00000491183 NEK9Q8TD19 979 aa20.19■□□□□ 0.82
HMGN1-219ENST00000491183 NLRP7Q8WX94 980 aa20.19■□□□□ 0.82
HMGN1-219ENST00000491183 PABPC5Q96DU9 382 aaKnown RBP20.19■□□□□ 0.82
HMGN1-219ENST00000491183 CYP26B1Q9NR63 512 aa20.19■□□□□ 0.82
HMGN1-219ENST00000491183 RNF19AQ9NV58 838 aa20.19■□□□□ 0.82
HMGN1-219ENST00000491183 RGL1Q9NZL6 768 aa20.19■□□□□ 0.82
HMGN1-219ENST00000491183 SUCLA2Q9P2R7 463 aaPredicted RBP20.19■□□□□ 0.82
HMGN1-219ENST00000491183 HCSTQ9UBK5 93 aa20.19■□□□□ 0.82
HMGN1-219ENST00000491183 LIMCH1Q9UPQ0 1083 aa20.19■□□□□ 0.82
HMGN1-219ENST00000491183 PLXNA4Q9HCM2 1894 aa20.18■□□□□ 0.82
HMGN1-219ENST00000491183 A0A087WZ62 844 aa20.18■□□□□ 0.82
HMGN1-219ENST00000491183 CSPG5O95196 566 aa20.18■□□□□ 0.82
HMGN1-219ENST00000491183 ZSCAN20P17040 1043 aaPredicted RBP20.18■□□□□ 0.82
HMGN1-219ENST00000491183 DNM2P50570 870 aa20.18■□□□□ 0.82
HMGN1-219ENST00000491183 HYAL1Q12794 435 aa20.18■□□□□ 0.82
HMGN1-219ENST00000491183 NCAPH2Q6IBW4 605 aa20.18■□□□□ 0.82
HMGN1-219ENST00000491183 ECHDC2Q86YB7 292 aa20.18■□□□□ 0.82
HMGN1-219ENST00000491183 KSR1Q8IVT5 923 aa20.18■□□□□ 0.82
HMGN1-219ENST00000491183 C4orf19Q8IY42 314 aa20.18■□□□□ 0.82
HMGN1-219ENST00000491183 SCLT1Q96NL6 688 aa20.18■□□□□ 0.82
HMGN1-219ENST00000491183 FDXACB1Q9BRP7 624 aaPredicted RBP20.18■□□□□ 0.82
HMGN1-219ENST00000491183 TYW1Q9NV66 732 aaKnown RBP20.18■□□□□ 0.82
HMGN1-219ENST00000491183 NCOR1O75376 2440 aa20.18■□□□□ 0.82
HMGN1-219ENST00000491183 H3BQ06 376 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-219ENST00000491183 ZBTB39O15060 712 aa20.17■□□□□ 0.82
HMGN1-219ENST00000491183 DKC1O60832 514 aaKnown RBP eCLIP20.17■□□□□ 0.82
HMGN1-219ENST00000491183 BAG4O95429 457 aaKnown RBP20.17■□□□□ 0.82
HMGN1-219ENST00000491183 LTBRP36941 435 aa20.17■□□□□ 0.82
HMGN1-219ENST00000491183 CDC42EP1Q00587 391 aa20.17■□□□□ 0.82
HMGN1-219ENST00000491183 TRIM29Q14134 588 aa20.17■□□□□ 0.82
HMGN1-219ENST00000491183 RHPN2Q8IUC4 686 aa20.17■□□□□ 0.82
HMGN1-219ENST00000491183 CCDC83Q8IWF9 413 aa20.17■□□□□ 0.82
HMGN1-219ENST00000491183 SLFN12Q8IYM2 578 aa20.17■□□□□ 0.82
HMGN1-219ENST00000491183 DYDC2Q96IM9 177 aa20.17■□□□□ 0.82
HMGN1-219ENST00000491183 LXNQ9BS40 222 aa20.17■□□□□ 0.82
HMGN1-219ENST00000491183 GCOM2Q9BZD3 368 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-219ENST00000491183 CWH43Q9H720 699 aa20.17■□□□□ 0.82
HMGN1-219ENST00000491183 SLITRK3O94933 977 aa20.16■□□□□ 0.82
HMGN1-219ENST00000491183 GTF2F1P35269 517 aaKnown RBP eCLIP20.16■□□□□ 0.82
HMGN1-219ENST00000491183 IRS1P35568 1242 aa20.16■□□□□ 0.82
HMGN1-219ENST00000491183 GUCY1B3Q02153 619 aa20.16■□□□□ 0.82
HMGN1-219ENST00000491183 CTTNQ14247 550 aaKnown RBP20.16■□□□□ 0.82
HMGN1-219ENST00000491183 CTC1Q2NKJ3 1217 aa20.16■□□□□ 0.82
HMGN1-219ENST00000491183 LRRC55Q6ZSA7 311 aa20.16■□□□□ 0.82
HMGN1-219ENST00000491183 POF1BQ8WVV4 589 aa20.16■□□□□ 0.82
HMGN1-219ENST00000491183 CEP170P1Q96L14 293 aa20.16■□□□□ 0.82
HMGN1-219ENST00000491183 CASD1Q96PB1 797 aa20.16■□□□□ 0.82
HMGN1-219ENST00000491183 DHX33Q9H6R0 707 aaKnown RBP20.16■□□□□ 0.82
HMGN1-219ENST00000491183 PCDHA12Q9UN75 941 aa20.16■□□□□ 0.82
HMGN1-219ENST00000491183 A0A0U1RQF3 1178 aa20.15■□□□□ 0.82
HMGN1-219ENST00000491183 GRXCR2A6NFK2 248 aa20.15■□□□□ 0.82
HMGN1-219ENST00000491183 IL9P15248 144 aa20.15■□□□□ 0.82
HMGN1-219ENST00000491183 YWHABP31946 246 aaKnown RBP20.15■□□□□ 0.82
HMGN1-219ENST00000491183 CALCRLQ16602 461 aa20.15■□□□□ 0.82
HMGN1-219ENST00000491183 SPOUT1Q5T280 376 aaKnown RBP20.15■□□□□ 0.82
HMGN1-219ENST00000491183 PTCRAQ6ISU1 281 aaPredicted RBP20.15■□□□□ 0.82
HMGN1-219ENST00000491183 EP400NLQ6ZTU2 488 aa20.15■□□□□ 0.82
HMGN1-219ENST00000491183 ZNF598Q86UK7 904 aaKnown RBP20.15■□□□□ 0.82
HMGN1-219ENST00000491183 ZNF410Q86VK4 478 aa20.15■□□□□ 0.82
HMGN1-219ENST00000491183 MTMR9Q96QG7 549 aa20.15■□□□□ 0.82
HMGN1-219ENST00000491183 JPH2Q9BR39 696 aaPredicted RBP20.15■□□□□ 0.82
HMGN1-219ENST00000491183 TMEM117Q9H0C3 514 aa20.15■□□□□ 0.82
HMGN1-219ENST00000491183 CD320Q9NPF0 282 aa20.15■□□□□ 0.82
HMGN1-219ENST00000491183 CLDND1Q9NY35 253 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms