RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 POLR3CQ9BUI4 534 aaPredicted RBP25.06■■□□□ 1.6
USF3-203ENST00000491165 CCDC151A5D8V7 595 aa25.06■■□□□ 1.6
USF3-203ENST00000491165 SFNP31947 248 aa25.06■■□□□ 1.6
USF3-203ENST00000491165 JAK3P52333 1124 aa25.06■■□□□ 1.6
USF3-203ENST00000491165 ARHGEF6Q15052 776 aa25.06■■□□□ 1.6
USF3-203ENST00000491165 BRD3Q15059 726 aa25.06■■□□□ 1.6
USF3-203ENST00000491165 TRMT1LQ7Z2T5 733 aaKnown RBP25.06■■□□□ 1.6
USF3-203ENST00000491165 PTPN22Q9Y2R2 807 aa25.06■■□□□ 1.6
USF3-203ENST00000491165 GDAQ9Y2T3 454 aa25.06■■□□□ 1.6
USF3-203ENST00000491165 E9PMD0 336 aa25.05■■□□□ 1.6
USF3-203ENST00000491165 GH1P01241 217 aa25.05■■□□□ 1.6
USF3-203ENST00000491165 TCF7P36402 384 aaPredicted RBP25.05■■□□□ 1.6
USF3-203ENST00000491165 PRCPP42785 496 aa25.05■■□□□ 1.6
USF3-203ENST00000491165 SWSAP1Q6NVH7 229 aa25.05■■□□□ 1.6
USF3-203ENST00000491165 ERMNQ8TAM6 284 aa25.05■■□□□ 1.6
USF3-203ENST00000491165 SH3TC2Q8TF17 1288 aa25.05■■□□□ 1.6
USF3-203ENST00000491165 AFG1LQ8WV93 481 aa25.05■■□□□ 1.6
USF3-203ENST00000491165 CALML4Q96GE6 196 aa25.05■■□□□ 1.6
USF3-203ENST00000491165 ZSWIM4Q9H7M6 989 aa25.05■■□□□ 1.6
USF3-203ENST00000491165 ZNF862O60290 1169 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 SUPT20HL2P0C7V6 817 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 CNGA1P29973 690 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 GRK4P32298 578 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 TUBB4BP68371 445 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 TRIM50Q86XT4 487 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 SLC35F6Q8N357 371 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 PIGOQ8TEQ8 1089 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 EMID1Q96A84 441 aaPredicted RBP25.04■■□□□ 1.6
USF3-203ENST00000491165 MYO1AQ9UBC5 1043 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 GABBR1Q9UBS5 961 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 IGKV6D-21A0A0A0MT36 114 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 TMEM150BA6NC51 233 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 INHAP05111 366 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 P4HBP07237 508 aaKnown RBP25.04■■□□□ 1.6
USF3-203ENST00000491165 AKR1A1P14550 325 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 PRMT2P55345 433 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 TCEAL9Q9UHQ7 104 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 PUF60Q9UHX1 559 aaKnown RBP25.04■■□□□ 1.6
USF3-203ENST00000491165 FAM184BQ9ULE4 1060 aa25.04■■□□□ 1.6
USF3-203ENST00000491165 DYNC1LI2O43237 492 aaPredicted RBP25.03■■□□□ 1.6
USF3-203ENST00000491165 UBXN1Q04323 297 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 LAMC2Q13753 1193 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 TLK2Q86UE8 772 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 SEPT1Q8WYJ6 367 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 CDK5RAP3Q96JB5 506 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 FUT8Q9BYC5 575 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 TUFT1Q9NNX1 390 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 MAPK8IP1Q9UQF2 711 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 KDM3AQ9Y4C1 1321 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 RNF225M0QZC1 329 aaPredicted RBP25.03■■□□□ 1.6
USF3-203ENST00000491165 NOP56O00567 594 aaKnown RBP25.03■■□□□ 1.6
USF3-203ENST00000491165 POLR3GO15318 223 aaPredicted RBP25.03■■□□□ 1.6
USF3-203ENST00000491165 ATP4AP20648 1035 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 KRT9P35527 623 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 SMC1AQ14683 1233 aaKnown RBP25.03■■□□□ 1.6
USF3-203ENST00000491165 ADSSL1Q8N142 457 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 SLAIN1Q8ND83 568 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 RDM1Q8NG50 284 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 OR6J1Q8NGC5 347 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 NAPGQ99747 312 aaPredicted RBP25.03■■□□□ 1.6
USF3-203ENST00000491165 SH2D3AQ9BRG2 576 aa25.03■■□□□ 1.6
USF3-203ENST00000491165 SEPT4O43236 478 aa25.02■■□□□ 1.6
USF3-203ENST00000491165 PSAPP07602 524 aa25.02■■□□□ 1.6
USF3-203ENST00000491165 OAS2P29728 719 aaKnown RBP25.02■■□□□ 1.6
USF3-203ENST00000491165 QARSP47897 775 aaKnown RBP25.02■■□□□ 1.6
USF3-203ENST00000491165 LONRF2Q1L5Z9 754 aa25.02■■□□□ 1.6
USF3-203ENST00000491165 PPTC7Q8NI37 304 aa25.02■■□□□ 1.6
USF3-203ENST00000491165 IGSF9BQ9UPX0 1349 aa25.02■■□□□ 1.6
USF3-203ENST00000491165 ERICH4A6NGS2 130 aa25.01■■□□□ 1.59
USF3-203ENST00000491165 NKRFO15226 690 aaKnown RBP eCLIP25.01■■□□□ 1.59
USF3-203ENST00000491165 MIS18BP1Q6P0N0 1132 aa25.01■■□□□ 1.59
USF3-203ENST00000491165 NT5C3AQ9H0P0 336 aa25.01■■□□□ 1.59
USF3-203ENST00000491165 ANKZF1Q9H8Y5 726 aa25.01■■□□□ 1.59
USF3-203ENST00000491165 MYADML2A6NDP7 307 aa25.01■■□□□ 1.59
USF3-203ENST00000491165 MYL1P05976 194 aa25.01■■□□□ 1.59
USF3-203ENST00000491165 ARHGAP25P42331 645 aa25.01■■□□□ 1.59
USF3-203ENST00000491165 MCM6Q14566 821 aa25.01■■□□□ 1.59
USF3-203ENST00000491165 KCNB1Q14721 858 aa25.01■■□□□ 1.59
USF3-203ENST00000491165 MAFBQ9Y5Q3 323 aaPredicted RBP25.01■■□□□ 1.59
USF3-203ENST00000491165 BACH1O14867 736 aa25■■□□□ 1.59
USF3-203ENST00000491165 STBD1O95210 358 aa25■■□□□ 1.59
USF3-203ENST00000491165 MMP3P08254 477 aa25■■□□□ 1.59
USF3-203ENST00000491165 IRF2BP1Q8IU81 584 aa25■■□□□ 1.59
USF3-203ENST00000491165 HNRNPLLQ8WVV9 542 aaKnown RBP25■■□□□ 1.59
USF3-203ENST00000491165 LARP4BQ92615 738 aaKnown RBP25■■□□□ 1.59
USF3-203ENST00000491165 RAD54LQ92698 747 aa25■■□□□ 1.59
USF3-203ENST00000491165 ZKSCAN7Q9P0L1 754 aaPredicted RBP25■■□□□ 1.59
USF3-203ENST00000491165 ARID2Q68CP9 1835 aa25■■□□□ 1.59
USF3-203ENST00000491165 PSMC5P62195 406 aa25■■□□□ 1.59
USF3-203ENST00000491165 BEX3Q00994 111 aa25■■□□□ 1.59
USF3-203ENST00000491165 STIM1Q13586 685 aa25■■□□□ 1.59
USF3-203ENST00000491165 WHAMMP3Q1A5X7 153 aa25■■□□□ 1.59
USF3-203ENST00000491165 MSANTD4Q8NCY6 345 aa25■■□□□ 1.59
USF3-203ENST00000491165 NEK9Q8TD19 979 aa25■■□□□ 1.59
USF3-203ENST00000491165 ZNF302Q9NR11 478 aa25■■□□□ 1.59
USF3-203ENST00000491165 FRMPD3Q5JV73 1810 aa25■■□□□ 1.59
USF3-203ENST00000491165 TRIM49BA6NDI0 452 aa24.99■■□□□ 1.59
USF3-203ENST00000491165 LGALS16A8MUM7 142 aa24.99■■□□□ 1.59
USF3-203ENST00000491165 ZNF286BP0CG31 522 aa24.99■■□□□ 1.59
USF3-203ENST00000491165 EEF1GP26641 437 aaKnown RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms