RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 NR2E1Q9Y466 385 aa20.98■□□□□ 0.95
SNAPC3-206ENST00000490969 MAST2Q6P0Q8 1798 aa20.98■□□□□ 0.95
SNAPC3-206ENST00000490969 TDP2O95551 362 aa20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 H2AFZP0C0S5 128 aa20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 UCHL3P15374 230 aa20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 NQO1P15559 274 aaKnown RBP20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 SLC9A1P19634 815 aa20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 KCNJ2P63252 427 aa20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 SLMAPQ14BN4 828 aa20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 ECM1Q16610 540 aa20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 DPY19L2P1Q6NXN4 242 aa20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 H2AFVQ71UI9 128 aa20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 SPDL1Q96EA4 605 aa20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 NENFQ9UMX5 172 aa20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 A0A0A6YYK5 440 aaPredicted RBP20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 SPDYE3A6NKU9 549 aa20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 RGS16O15492 202 aaPredicted RBP20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 NT5C2P49902 561 aa20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 IFI35P80217 286 aaPredicted RBP20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 ADAM9Q13443 819 aa20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 DUPD1Q68J44 220 aa20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 RTFDC1Q9BY42 306 aaPredicted RBP20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 NSRP1Q9H0G5 558 aaKnown RBP20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 TTC7AQ9ULT0 858 aaPredicted RBP20.97■□□□□ 0.95
SNAPC3-206ENST00000490969 SMIM23A6NLE4 172 aa20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 H0YIN7 160 aa20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 GCKP35557 465 aa20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 PRKCIP41743 596 aa20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 PTENP60484 403 aa20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 RNF25Q96BH1 459 aaPredicted RBP20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 ZNF570Q96NI8 536 aa20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 ATP8B3O60423 1300 aa20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 UBOX5O94941 541 aa20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 NCALDP61601 193 aa20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 DR1Q01658 176 aa20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 C11orf91Q3C1V1 193 aa20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 RBM46Q8TBY0 533 aaKnown RBP20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 ERP44Q9BS26 406 aa20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 KCTD10Q9H3F6 313 aa20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 DBNDD1Q9H9R9 158 aa20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 SEC63Q9UGP8 760 aaKnown RBP20.96■□□□□ 0.95
SNAPC3-206ENST00000490969 KIF13BQ9NQT8 1826 aa20.95■□□□□ 0.95
SNAPC3-206ENST00000490969 BAG6P46379 1132 aa20.95■□□□□ 0.94
SNAPC3-206ENST00000490969 KLRC3Q07444 240 aa20.95■□□□□ 0.94
SNAPC3-206ENST00000490969 ARMC2Q8NEN0 867 aa20.95■□□□□ 0.94
SNAPC3-206ENST00000490969 TGFBRAP1Q8WUH2 860 aa20.95■□□□□ 0.94
SNAPC3-206ENST00000490969 ZC3H12CQ9C0D7 883 aaKnown RBP20.95■□□□□ 0.94
SNAPC3-206ENST00000490969 HDAC9Q9UKV0 1011 aa20.95■□□□□ 0.94
SNAPC3-206ENST00000490969 AMFRQ9UKV5 643 aa20.95■□□□□ 0.94
SNAPC3-206ENST00000490969 PCDHA2Q9Y5H9 948 aa20.95■□□□□ 0.94
SNAPC3-206ENST00000490969 RARAP10276 462 aa20.95■□□□□ 0.94
SNAPC3-206ENST00000490969 ALDH5A1P51649 535 aaPredicted RBP20.95■□□□□ 0.94
SNAPC3-206ENST00000490969 NPEPPSP55786 919 aa20.95■□□□□ 0.94
SNAPC3-206ENST00000490969 ZC3H3Q8IXZ2 948 aaKnown RBP20.95■□□□□ 0.94
SNAPC3-206ENST00000490969 SCFD1Q8WVM8 642 aa20.95■□□□□ 0.94
SNAPC3-206ENST00000490969 VAT1LQ9HCJ6 419 aa20.95■□□□□ 0.94
SNAPC3-206ENST00000490969 DAAM1Q9Y4D1 1078 aa20.95■□□□□ 0.94
SNAPC3-206ENST00000490969 DIAPH2O60879 1101 aa20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 AGTP01019 485 aa20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 ANXA13P27216 316 aa20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 IFNAR2P48551 515 aa20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 ZNF444Q8N0Y2 327 aaPredicted RBP20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 BMP2KQ9NSY1 1161 aaPredicted RBP20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 CETN3O15182 167 aa20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 EDIL3O43854 480 aa20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 BTDP43251 543 aa20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 PLTPP55058 493 aa20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 SLC29A2Q14542 456 aa20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 VPS36Q86VN1 386 aa20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 DHX37Q8IY37 1157 aaKnown RBP20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 CEP120Q8N960 986 aa20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 SLC44A5Q8NCS7 719 aa20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 PIGSQ96S52 555 aa20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 INTUQ9ULD6 942 aa20.94■□□□□ 0.94
SNAPC3-206ENST00000490969 SNX3O60493 162 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 CCND1P24385 295 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 C6orf118Q5T5N4 469 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 CDCA2Q69YH5 1023 aaPredicted RBP20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 MAPKAPK5Q8IW41 473 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 CCDC65Q8IXS2 484 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 ECT2Q9H8V3 914 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 SAP30BPQ9UHR5 308 aaKnown RBP20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 CD2APQ9Y5K6 639 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 ESYT2A0FGR8 921 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 IGF2BP3O00425 579 aaKnown RBP eCLIP20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 PON1P27169 355 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 COPB2P35606 906 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 ADCY2Q08462 1091 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 PRPF4BQ13523 1007 aaKnown RBP20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 PPP2R5EQ16537 467 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 EXOC3L4Q17RC7 722 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 DCAF12L1Q5VU92 463 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 USP17L2Q6R6M4 530 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 ZNF483Q8TF39 744 aaPredicted RBP20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 GLG1Q92896 1179 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 EMILIN3Q9NT22 766 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 ROBO3Q96MS0 1386 aa20.93■□□□□ 0.94
SNAPC3-206ENST00000490969 CDK5RAP2Q96SN8 1893 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 FAM187AA6NFU0 413 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 DDX3XO00571 662 aaKnown RBP eCLIP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms