RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 C3orf20Q8ND61 904 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 FAM46AQ96IP4 442 aaKnown RBP6.46□□□□□ -1.38
VPS41-214ENST00000490924 ALS2CR12Q96Q35 445 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 PNKPQ96T60 521 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 NAP1L4Q99733 375 aaKnown RBP6.46□□□□□ -1.38
VPS41-214ENST00000490924 RUSC1Q9BVN2 902 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 PBX4Q9BYU1 374 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 NYXQ9GZU5 481 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 ZMYND12Q9H0C1 365 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 GLT8D2Q9H1C3 349 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 OSGEPQ9NPF4 335 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 RIC8AQ9NPQ8 531 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 ST7Q9NRC1 585 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 TOMM22Q9NS69 142 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 GGA2Q9UJY4 613 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 LEMD3Q9Y2U8 911 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 REXO2Q9Y3B8 237 aaKnown RBP6.46□□□□□ -1.38
VPS41-214ENST00000490924 DAAM1Q9Y4D1 1078 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 LAMB1P07942 1786 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 AHDC1Q5TGY3 1603 aaPredicted RBP6.46□□□□□ -1.38
VPS41-214ENST00000490924 AFF2P51816 1311 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 MYO3BQ8WXR4 1341 aa6.46□□□□□ -1.38
VPS41-214ENST00000490924 PLIN4Q96Q06 1357 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 PHLPP1O60346 1717 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 GRID2IPA4D2P6 1211 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 WDR64B1ANS9 1081 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 GOLGA8KD6RF30 607 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 MYO1CO00159 1063 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 OPA1O60313 960 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 PRMT3O60678 531 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 TACC1O75410 805 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 PRPF6O94906 941 aaKnown RBP6.45□□□□□ -1.38
VPS41-214ENST00000490924 PLEKHA8P1O95397 391 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 GNA14O95837 355 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 CAPN2P17655 700 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 MAGEA9P43362 315 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 LMAN1P49257 510 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 EPHB4P54760 987 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 ATP11AP98196 1134 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 SPA17Q15506 151 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 EARS2Q5JPH6 523 aaKnown RBP6.45□□□□□ -1.38
VPS41-214ENST00000490924 CCDC122Q5T0U0 273 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 C10orf76Q5T2E6 689 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 MCTP2Q6DN12 878 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 CENPPQ6IPU0 288 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 KLHL10Q6JEL2 608 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 WDR59Q6PJI9 974 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 CCNI2Q6ZMN8 369 aaPredicted RBP6.45□□□□□ -1.38
VPS41-214ENST00000490924 CD302Q8IX05 232 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 EFCAB13Q8IY85 973 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 GRAMD1CQ8IYS0 662 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 SYNE4Q8N205 404 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 ARMC10Q8N2F6 343 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 MREGQ8N565 214 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 SHKBP1Q8TBC3 707 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 WDR66Q8TBY9 1149 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 AFAP1L1Q8TED9 768 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 AENQ8WTP8 325 aaKnown RBP6.45□□□□□ -1.38
VPS41-214ENST00000490924 PPM1EQ8WY54 764 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 DDX17Q92841 729 aaKnown RBP6.45□□□□□ -1.38
VPS41-214ENST00000490924 SECISBP2LQ93073 1101 aaKnown RBP6.45□□□□□ -1.38
VPS41-214ENST00000490924 P2RX5Q93086 422 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 CAVIN3Q969G5 261 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 COL26A1Q96A83 441 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 FAM84BQ96KN1 310 aaPredicted RBP6.45□□□□□ -1.38
VPS41-214ENST00000490924 SH3GL2Q99962 352 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 TUBGCP2Q9BSJ2 902 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 CRACR2AQ9BSW2 395 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 PAGR1Q9BTK6 254 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 YIPF2Q9BWQ6 316 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 OSBPL1AQ9BXW6 950 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 RAB34Q9BZG1 259 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 TRIM9Q9C026 710 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 KAT14Q9H8E8 782 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 TMEM51Q9NW97 253 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 FEZ2Q9UHY8 353 aaPredicted RBP6.45□□□□□ -1.38
VPS41-214ENST00000490924 HPCAL4Q9UM19 191 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 SNX12Q9UMY4 172 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 CNTNAP4Q9C0A0 1308 aa6.45□□□□□ -1.38
VPS41-214ENST00000490924 MINDY4BA8MYZ0 360 aa6.44□□□□□ -1.38
VPS41-214ENST00000490924 UBE2Q2LH0YL09 131 aa6.44□□□□□ -1.38
VPS41-214ENST00000490924 H3BRJ5 948 aa6.44□□□□□ -1.38
VPS41-214ENST00000490924 POLR3GO15318 223 aaPredicted RBP6.44□□□□□ -1.38
VPS41-214ENST00000490924 BAG3O95817 575 aa6.44□□□□□ -1.38
VPS41-214ENST00000490924 LDHCP07864 332 aa6.44□□□□□ -1.38
VPS41-214ENST00000490924 OR52Z1P0C646 297 aa6.44□□□□□ -1.38
VPS41-214ENST00000490924 TRIM21P19474 475 aaKnown RBP6.44□□□□□ -1.38
VPS41-214ENST00000490924 CCT6AP40227 531 aaKnown RBP6.44□□□□□ -1.38
VPS41-214ENST00000490924 CRKLP46109 303 aaKnown RBP6.44□□□□□ -1.38
VPS41-214ENST00000490924 STX17P56962 302 aa6.44□□□□□ -1.38
VPS41-214ENST00000490924 CORO7P57737 925 aa6.44□□□□□ -1.38
VPS41-214ENST00000490924 HERVK_113P62684 666 aa6.44□□□□□ -1.38
VPS41-214ENST00000490924 ST5P78524 1137 aa6.44□□□□□ -1.38
VPS41-214ENST00000490924 EHHADHQ08426 723 aa6.44□□□□□ -1.38
VPS41-214ENST00000490924 GOLGA8FQ08AF8 430 aa6.44□□□□□ -1.38
VPS41-214ENST00000490924 GOLGA8DPQ0D2H9 430 aa6.44□□□□□ -1.38
VPS41-214ENST00000490924 ZNF174Q15697 407 aa6.44□□□□□ -1.38
VPS41-214ENST00000490924 IL17AQ16552 155 aa6.44□□□□□ -1.38
VPS41-214ENST00000490924 DNAJC21Q5F1R6 531 aaKnown RBP6.44□□□□□ -1.38
VPS41-214ENST00000490924 C12orf60Q5U649 245 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms