RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 ST3GAL5Q9UNP4 418 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 TTC3P53804 2025 aa17.18■□□□□ 0.34
VPS26A-207ENST00000490696 A0A087WWV3 80 aa17.17■□□□□ 0.34
VPS26A-207ENST00000490696 LCHNA4D1U4 455 aa17.17■□□□□ 0.34
VPS26A-207ENST00000490696 XRCC6P12956 609 aaKnown RBP eCLIP17.17■□□□□ 0.34
VPS26A-207ENST00000490696 RARRES1P49788 294 aa17.17■□□□□ 0.34
VPS26A-207ENST00000490696 POLGP54098 1239 aaPredicted RBP17.17■□□□□ 0.34
VPS26A-207ENST00000490696 CDC42EP1Q00587 391 aa17.17■□□□□ 0.34
VPS26A-207ENST00000490696 NFX1Q12986 1120 aaKnown RBP17.17■□□□□ 0.34
VPS26A-207ENST00000490696 EMC2Q15006 297 aa17.17■□□□□ 0.34
VPS26A-207ENST00000490696 PPP2R2DQ66LE6 453 aa17.17■□□□□ 0.34
VPS26A-207ENST00000490696 FAM117BQ6P1L5 589 aa17.17■□□□□ 0.34
VPS26A-207ENST00000490696 FAM43BQ6ZT52 329 aaPredicted RBP17.17■□□□□ 0.34
VPS26A-207ENST00000490696 PIGOQ8TEQ8 1089 aa17.17■□□□□ 0.34
VPS26A-207ENST00000490696 CDX2Q99626 313 aaPredicted RBP17.17■□□□□ 0.34
VPS26A-207ENST00000490696 ZBED2Q9BTP6 218 aa17.17■□□□□ 0.34
VPS26A-207ENST00000490696 XPNPEP1Q9NQW7 623 aa17.17■□□□□ 0.34
VPS26A-207ENST00000490696 LRWD1Q9UFC0 647 aa17.17■□□□□ 0.34
VPS26A-207ENST00000490696 ARID2Q68CP9 1835 aa17.17■□□□□ 0.34
VPS26A-207ENST00000490696 GPR182O15218 404 aa17.16■□□□□ 0.34
VPS26A-207ENST00000490696 GAS2O43903 313 aaKnown RBP17.16■□□□□ 0.34
VPS26A-207ENST00000490696 DARSP14868 501 aaKnown RBP17.16■□□□□ 0.34
VPS26A-207ENST00000490696 MUTP22033 750 aa17.16■□□□□ 0.34
VPS26A-207ENST00000490696 HTRA4P83105 476 aaPredicted RBP17.16■□□□□ 0.34
VPS26A-207ENST00000490696 TAP1Q03518 808 aa17.16■□□□□ 0.34
VPS26A-207ENST00000490696 RESTQ13127 1097 aa17.16■□□□□ 0.34
VPS26A-207ENST00000490696 ODR4Q5SWX8 454 aa17.16■□□□□ 0.34
VPS26A-207ENST00000490696 HAUS3Q68CZ6 603 aa17.16■□□□□ 0.34
VPS26A-207ENST00000490696 POTEGQ6S5H5 508 aa17.16■□□□□ 0.34
VPS26A-207ENST00000490696 DTHD1Q6ZMT9 781 aa17.16■□□□□ 0.34
VPS26A-207ENST00000490696 RHPN2Q8IUC4 686 aa17.16■□□□□ 0.34
VPS26A-207ENST00000490696 NLRP7Q8WX94 980 aa17.16■□□□□ 0.34
VPS26A-207ENST00000490696 TMEM143Q96AN5 459 aa17.16■□□□□ 0.34
VPS26A-207ENST00000490696 RAB34Q9BZG1 259 aa17.16■□□□□ 0.34
VPS26A-207ENST00000490696 BMP2KQ9NSY1 1161 aaPredicted RBP17.16■□□□□ 0.34
VPS26A-207ENST00000490696 MTMR6Q9Y217 621 aa17.16■□□□□ 0.34
VPS26A-207ENST00000490696 MGEA5O60502 916 aa17.15■□□□□ 0.34
VPS26A-207ENST00000490696 DGAT1O75907 488 aa17.15■□□□□ 0.34
VPS26A-207ENST00000490696 UPP2O95045 317 aa17.15■□□□□ 0.34
VPS26A-207ENST00000490696 ECM1Q16610 540 aa17.15■□□□□ 0.34
VPS26A-207ENST00000490696 ARL6IP4Q66PJ3 421 aaKnown RBP17.15■□□□□ 0.34
VPS26A-207ENST00000490696 ZNF410Q86VK4 478 aa17.15■□□□□ 0.34
VPS26A-207ENST00000490696 KSR1Q8IVT5 923 aa17.15■□□□□ 0.34
VPS26A-207ENST00000490696 CRIPAKQ8N1N5 446 aa17.15■□□□□ 0.34
VPS26A-207ENST00000490696 PSPC1Q8WXF1 523 aaKnown RBP17.15■□□□□ 0.34
VPS26A-207ENST00000490696 SCLT1Q96NL6 688 aa17.15■□□□□ 0.34
VPS26A-207ENST00000490696 NACC1Q96RE7 527 aa17.15■□□□□ 0.34
VPS26A-207ENST00000490696 MTRQ99707 1265 aa17.15■□□□□ 0.34
VPS26A-207ENST00000490696 DBR1Q9UK59 544 aaKnown RBP17.15■□□□□ 0.34
VPS26A-207ENST00000490696 INSL6Q9Y581 213 aa17.15■□□□□ 0.34
VPS26A-207ENST00000490696 COL4A3BPQ9Y5P4 624 aa17.15■□□□□ 0.34
VPS26A-207ENST00000490696 A0A087WZ62 844 aa17.14■□□□□ 0.33
VPS26A-207ENST00000490696 PP2D1A8MPX8 630 aa17.14■□□□□ 0.33
VPS26A-207ENST00000490696 STX6O43752 255 aa17.14■□□□□ 0.33
VPS26A-207ENST00000490696 CCT6AP40227 531 aaKnown RBP17.14■□□□□ 0.33
VPS26A-207ENST00000490696 DSC3Q14574 896 aa17.14■□□□□ 0.33
VPS26A-207ENST00000490696 SP7Q8TDD2 431 aaPredicted RBP17.14■□□□□ 0.33
VPS26A-207ENST00000490696 TCP11Q8WWU5 503 aa17.14■□□□□ 0.33
VPS26A-207ENST00000490696 PRPF31Q8WWY3 499 aaKnown RBP17.14■□□□□ 0.33
VPS26A-207ENST00000490696 FDXACB1Q9BRP7 624 aaPredicted RBP17.14■□□□□ 0.33
VPS26A-207ENST00000490696 MMTAG2Q9BU76 263 aaKnown RBP17.14■□□□□ 0.33
VPS26A-207ENST00000490696 GCOM2Q9BZD3 368 aaPredicted RBP17.14■□□□□ 0.33
VPS26A-207ENST00000490696 ATP6V0A4Q9HBG4 840 aa17.14■□□□□ 0.33
VPS26A-207ENST00000490696 STXBP5LQ9Y2K9 1186 aa17.14■□□□□ 0.33
VPS26A-207ENST00000490696 STK24Q9Y6E0 443 aa17.14■□□□□ 0.33
VPS26A-207ENST00000490696 CSDE1O75534 798 aaKnown RBP17.13■□□□□ 0.33
VPS26A-207ENST00000490696 BMP15O95972 392 aa17.13■□□□□ 0.33
VPS26A-207ENST00000490696 CDC25AP30304 524 aa17.13■□□□□ 0.33
VPS26A-207ENST00000490696 LAMTOR4Q0VGL1 99 aa17.13■□□□□ 0.33
VPS26A-207ENST00000490696 SPRED2Q7Z698 418 aa17.13■□□□□ 0.33
VPS26A-207ENST00000490696 SNX29Q8TEQ0 813 aa17.13■□□□□ 0.33
VPS26A-207ENST00000490696 MYLIPQ8WY64 445 aa17.13■□□□□ 0.33
VPS26A-207ENST00000490696 NLRP4Q96MN2 994 aa17.13■□□□□ 0.33
VPS26A-207ENST00000490696 CCDC43Q96MW1 224 aaKnown RBP17.13■□□□□ 0.33
VPS26A-207ENST00000490696 ADAM2Q99965 735 aa17.13■□□□□ 0.33
VPS26A-207ENST00000490696 PRDM12Q9H4Q4 367 aa17.13■□□□□ 0.33
VPS26A-207ENST00000490696 RC3H2Q9HBD1 1191 aaKnown RBP17.13■□□□□ 0.33
VPS26A-207ENST00000490696 IFT122Q9HBG6 1241 aa17.13■□□□□ 0.33
VPS26A-207ENST00000490696 RGS18Q9NS28 235 aa17.13■□□□□ 0.33
VPS26A-207ENST00000490696 DENND3A2RUS2 1198 aa17.12■□□□□ 0.33
VPS26A-207ENST00000490696 LINC01553A4QN01 128 aa17.12■□□□□ 0.33
VPS26A-207ENST00000490696 VWA3AA6NCI4 1184 aa17.12■□□□□ 0.33
VPS26A-207ENST00000490696 C9IYK1 514 aa17.12■□□□□ 0.33
VPS26A-207ENST00000490696 ASAP2O43150 1006 aa17.12■□□□□ 0.33
VPS26A-207ENST00000490696 USO1O60763 962 aaKnown RBP17.12■□□□□ 0.33
VPS26A-207ENST00000490696 FGFR4P22455 802 aa17.12■□□□□ 0.33
VPS26A-207ENST00000490696 ARL2P36404 184 aa17.12■□□□□ 0.33
VPS26A-207ENST00000490696 SARSP49591 514 aaKnown RBP17.12■□□□□ 0.33
VPS26A-207ENST00000490696 SF3A1Q15459 793 aaKnown RBP17.12■□□□□ 0.33
VPS26A-207ENST00000490696 KRT79Q5XKE5 535 aa17.12■□□□□ 0.33
VPS26A-207ENST00000490696 FAM173BQ6P4H8 233 aa17.12■□□□□ 0.33
VPS26A-207ENST00000490696 NPAS4Q8IUM7 802 aa17.12■□□□□ 0.33
VPS26A-207ENST00000490696 YME1L1Q96TA2 773 aa17.12■□□□□ 0.33
VPS26A-207ENST00000490696 C1orf112Q9NSG2 853 aa17.12■□□□□ 0.33
VPS26A-207ENST00000490696 KIAA1024Q9UPX6 916 aa17.12■□□□□ 0.33
VPS26A-207ENST00000490696 COL4A6Q14031 1691 aa17.12■□□□□ 0.33
VPS26A-207ENST00000490696 EPOPA6NHQ4 379 aa17.11■□□□□ 0.33
VPS26A-207ENST00000490696 HSP90AA1P07900 732 aaKnown RBP17.11■□□□□ 0.33
VPS26A-207ENST00000490696 SRGAP2CP0DJJ0 459 aa17.11■□□□□ 0.33
VPS26A-207ENST00000490696 FAM189BP81408 668 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms