RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 MAP7D2Q96T17 732 aa14.66□□□□□ -0.06
SNX12-205ENST00000490561 POLR3FQ9H1D9 316 aaPredicted RBP14.66□□□□□ -0.06
SNX12-205ENST00000490561 XPNPEP1Q9NQW7 623 aa14.66□□□□□ -0.06
SNX12-205ENST00000490561 STARD7Q9NQZ5 370 aa14.66□□□□□ -0.06
SNX12-205ENST00000490561 OLFML3Q9NRN5 406 aa14.66□□□□□ -0.06
SNX12-205ENST00000490561 SETD4Q9NVD3 440 aa14.66□□□□□ -0.06
SNX12-205ENST00000490561 ANO10Q9NW15 660 aa14.66□□□□□ -0.06
SNX12-205ENST00000490561 HDAC6Q9UBN7 1215 aa14.66□□□□□ -0.06
SNX12-205ENST00000490561 DACH1Q9UI36 760 aa14.66□□□□□ -0.06
SNX12-205ENST00000490561 MAN1B1Q9UKM7 699 aa14.66□□□□□ -0.06
SNX12-205ENST00000490561 PCDHA2Q9Y5H9 948 aa14.66□□□□□ -0.06
SNX12-205ENST00000490561 SCN10AQ9Y5Y9 1956 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 NPHP3-ACAD11A0A0J9YXS1 232 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 SMIM35A0A1B0GVV1 85 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 SYCE3A1L190 88 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 KLRC1P26715 233 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 CASP1P29466 404 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 NLRP12P59046 1061 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 RAD51AP2Q09MP3 1159 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 ITGA7Q13683 1181 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 MORC3Q14149 939 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 TFDP1Q14186 410 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 STX1AQ16623 288 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 HERC4Q5GLZ8 1057 aaPredicted RBP14.65□□□□□ -0.06
SNX12-205ENST00000490561 FAM47CQ5HY64 1035 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 CT47A1Q5JQC4 288 aaPredicted RBP14.65□□□□□ -0.06
SNX12-205ENST00000490561 FAM26FQ5R3K3 315 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 ZNF658Q5TYW1 1059 aaPredicted RBP14.65□□□□□ -0.06
SNX12-205ENST00000490561 EFCAB12Q6NXP0 572 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 MYCT1Q8N699 235 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 METTL13Q8N6R0 699 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 SPIRE2Q8WWL2 714 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 PSPC1Q8WXF1 523 aaKnown RBP14.65□□□□□ -0.06
SNX12-205ENST00000490561 SH2D3AQ9BRG2 576 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 ZHX3Q9H4I2 956 aa14.65□□□□□ -0.06
SNX12-205ENST00000490561 CAVIN2O95810 425 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 ARL2P36404 184 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 ZNF445P59923 1031 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 ADAM17P78536 824 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 EHHADHQ08426 723 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 MAPK7Q13164 816 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 STIM1Q13586 685 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 COBLL1Q53SF7 1204 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 ODR4Q5SWX8 454 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 MARCH8Q5T0T0 291 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 RSPH3Q86UC2 560 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 DAW1Q8N136 415 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 NME8Q8N427 588 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 LINC01465Q8N7H1 131 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 MLKLQ8NB16 471 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 SLC43A3Q8NBI5 491 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 TRAPPC12Q8WVT3 735 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 SUGCTQ9HAC7 445 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 SUCLA2Q9P2R7 463 aaPredicted RBP14.64□□□□□ -0.07
SNX12-205ENST00000490561 UBE4BO95155 1302 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 MROH7Q68CQ1 1323 aa14.64□□□□□ -0.07
SNX12-205ENST00000490561 RSPH10B2B2RC85 870 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 ARVCFO00192 962 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 RSPH10BP0C881 870 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 CYP2C9P11712 490 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 NAMPTP43490 491 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
SNX12-205ENST00000490561 POU5F1BQ06416 359 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 TYRO3Q06418 890 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 MAEAQ7L5Y9 396 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 SFR1Q86XK3 245 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 FAM178BQ8IXR5 827 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 ERCC4Q92889 916 aaPredicted RBP14.63□□□□□ -0.07
SNX12-205ENST00000490561 KCNN1Q92952 543 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 TMEM143Q96AN5 459 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 HVCN1Q96D96 273 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 NAT10Q9H0A0 1025 aaKnown RBP14.63□□□□□ -0.07
SNX12-205ENST00000490561 GZF1Q9H116 711 aaPredicted RBP14.63□□□□□ -0.07
SNX12-205ENST00000490561 C2orf40Q9H1Z8 148 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 ST6GALNAC4Q9H4F1 302 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 MRPL44Q9H9J2 332 aaKnown RBP14.63□□□□□ -0.07
SNX12-205ENST00000490561 PCDHB13Q9Y5F0 798 aa14.63□□□□□ -0.07
SNX12-205ENST00000490561 EIF3DO15371 548 aaKnown RBP eCLIP14.62□□□□□ -0.07
SNX12-205ENST00000490561 CAND2O75155 1236 aa14.62□□□□□ -0.07
SNX12-205ENST00000490561 LRSAM1Q6UWE0 723 aa14.62□□□□□ -0.07
SNX12-205ENST00000490561 RPAINQ86UA6 219 aa14.62□□□□□ -0.07
SNX12-205ENST00000490561 ZNF410Q86VK4 478 aa14.62□□□□□ -0.07
SNX12-205ENST00000490561 LRRC71Q8N4P6 559 aa14.62□□□□□ -0.07
SNX12-205ENST00000490561 PRPF31Q8WWY3 499 aaKnown RBP14.62□□□□□ -0.07
SNX12-205ENST00000490561 NTPCRQ9BSD7 190 aaKnown RBP14.62□□□□□ -0.07
SNX12-205ENST00000490561 GPRC5CQ9NQ84 441 aa14.62□□□□□ -0.07
SNX12-205ENST00000490561 KMT5AQ9NQR1 393 aa14.62□□□□□ -0.07
SNX12-205ENST00000490561 NOD1Q9Y239 953 aa14.62□□□□□ -0.07
SNX12-205ENST00000490561 AKT3Q9Y243 479 aa14.62□□□□□ -0.07
SNX12-205ENST00000490561 GRIN2DO15399 1336 aa14.62□□□□□ -0.07
SNX12-205ENST00000490561 CCDC169A6NNP5 214 aa14.61□□□□□ -0.07
SNX12-205ENST00000490561 K7ENM7 598 aa14.61□□□□□ -0.07
SNX12-205ENST00000490561 BIN1O00499 593 aa14.61□□□□□ -0.07
SNX12-205ENST00000490561 TLR3O15455 904 aaKnown RBP14.61□□□□□ -0.07
SNX12-205ENST00000490561 TREHO43280 583 aa14.61□□□□□ -0.07
SNX12-205ENST00000490561 GLRA2P23416 452 aa14.61□□□□□ -0.07
SNX12-205ENST00000490561 NPTX2P47972 431 aa14.61□□□□□ -0.07
SNX12-205ENST00000490561 CLCN3P51790 818 aa14.61□□□□□ -0.07
SNX12-205ENST00000490561 EFNA5P52803 228 aa14.61□□□□□ -0.07
SNX12-205ENST00000490561 NCKAP1LP55160 1127 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms