RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 C8orf34Q49A92 452 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 FAM102BQ5T8I3 360 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 NCAPH2Q6IBW4 605 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 EP400NLQ6ZTU2 488 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 ANO5Q75V66 913 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 CCDC83Q8IWF9 413 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 DIS3L2Q8IYB7 885 aaKnown RBP11.62□□□□□ -0.55
RBM39-236ENST00000490484 CEP89Q96ST8 783 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 LXNQ9BS40 222 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 PLVAPQ9BX97 442 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 ALG13Q9NP73 1137 aaKnown RBP11.62□□□□□ -0.55
RBM39-236ENST00000490484 BMP2KQ9NSY1 1161 aaPredicted RBP11.62□□□□□ -0.55
RBM39-236ENST00000490484 WRAP73Q9P2S5 460 aaPredicted RBP11.62□□□□□ -0.55
RBM39-236ENST00000490484 HCSTQ9UBK5 93 aa11.62□□□□□ -0.55
RBM39-236ENST00000490484 FNDC1Q4ZHG4 1894 aaPredicted RBP11.61□□□□□ -0.55
RBM39-236ENST00000490484 ARID2Q68CP9 1835 aa11.61□□□□□ -0.55
RBM39-236ENST00000490484 CSDE1O75534 798 aaKnown RBP11.61□□□□□ -0.55
RBM39-236ENST00000490484 DARSP14868 501 aaKnown RBP11.61□□□□□ -0.55
RBM39-236ENST00000490484 CYP4A11Q02928 519 aa11.61□□□□□ -0.55
RBM39-236ENST00000490484 DSC3Q14574 896 aa11.61□□□□□ -0.55
RBM39-236ENST00000490484 SPOUT1Q5T280 376 aaKnown RBP11.61□□□□□ -0.55
RBM39-236ENST00000490484 RHPN2Q8IUC4 686 aa11.61□□□□□ -0.55
RBM39-236ENST00000490484 SLFN12Q8IYM2 578 aa11.61□□□□□ -0.55
RBM39-236ENST00000490484 ZNF710Q8N1W2 664 aa11.61□□□□□ -0.55
RBM39-236ENST00000490484 KLHL23Q8NBE8 558 aa11.61□□□□□ -0.55
RBM39-236ENST00000490484 RNF169Q8NCN4 708 aa11.61□□□□□ -0.55
RBM39-236ENST00000490484 NLRP4Q96MN2 994 aa11.61□□□□□ -0.55
RBM39-236ENST00000490484 LMAN2LQ9H0V9 348 aa11.61□□□□□ -0.55
RBM39-236ENST00000490484 ATP6V0A4Q9HBG4 840 aa11.61□□□□□ -0.55
RBM39-236ENST00000490484 CYP26B1Q9NR63 512 aa11.61□□□□□ -0.55
RBM39-236ENST00000490484 RNF216Q9NWF9 866 aaPredicted RBP11.61□□□□□ -0.55
RBM39-236ENST00000490484 TMEM161AQ9NX61 479 aa11.61□□□□□ -0.55
RBM39-236ENST00000490484 PLAGL2Q9UPG8 496 aa11.61□□□□□ -0.55
RBM39-236ENST00000490484 LIMCH1Q9UPQ0 1083 aa11.61□□□□□ -0.55
RBM39-236ENST00000490484 MYO7AQ13402 2215 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 PLXNA4Q9HCM2 1894 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 A0A087WZ62 844 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 IGKV6-21A0A0C4DH24 114 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 H3BQ06 376 aaPredicted RBP11.6□□□□□ -0.55
RBM39-236ENST00000490484 WNT7AO00755 349 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 NEMFO60524 1076 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 DKC1O60832 514 aaKnown RBP eCLIP11.6□□□□□ -0.55
RBM39-236ENST00000490484 MAFO75444 373 aaPredicted RBP11.6□□□□□ -0.55
RBM39-236ENST00000490484 BAG4O95429 457 aaKnown RBP11.6□□□□□ -0.55
RBM39-236ENST00000490484 ITGB1P05556 798 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 P4HBP07237 508 aaKnown RBP11.6□□□□□ -0.55
RBM39-236ENST00000490484 ZSCAN20P17040 1043 aaPredicted RBP11.6□□□□□ -0.55
RBM39-236ENST00000490484 YWHABP31946 246 aaKnown RBP11.6□□□□□ -0.55
RBM39-236ENST00000490484 DNM2P50570 870 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 POLGP54098 1239 aaPredicted RBP11.6□□□□□ -0.55
RBM39-236ENST00000490484 NPEPPSP55786 919 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 GUCY1B3Q02153 619 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 SPIRE1Q08AE8 756 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 CTTNQ14247 550 aaKnown RBP11.6□□□□□ -0.55
RBM39-236ENST00000490484 CALCRLQ16602 461 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 FAM43BQ6ZT52 329 aaPredicted RBP11.6□□□□□ -0.55
RBM39-236ENST00000490484 KSR1Q8IVT5 923 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 SLC7A3Q8WY07 619 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 CEP170P1Q96L14 293 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 FDXACB1Q9BRP7 624 aaPredicted RBP11.6□□□□□ -0.55
RBM39-236ENST00000490484 GCOM2Q9BZD3 368 aaPredicted RBP11.6□□□□□ -0.55
RBM39-236ENST00000490484 CLDND1Q9NY35 253 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 RGL1Q9NZL6 768 aa11.6□□□□□ -0.55
RBM39-236ENST00000490484 SUCLA2Q9P2R7 463 aaPredicted RBP11.6□□□□□ -0.55
RBM39-236ENST00000490484 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.59□□□□□ -0.55
RBM39-236ENST00000490484 SFPQP23246 707 aaKnown RBP eCLIP11.59□□□□□ -0.55
RBM39-236ENST00000490484 DNAJB1P25685 340 aa11.59□□□□□ -0.55
RBM39-236ENST00000490484 CAMK1Q14012 370 aa11.59□□□□□ -0.55
RBM39-236ENST00000490484 EPHA7Q15375 998 aa11.59□□□□□ -0.55
RBM39-236ENST00000490484 SAFBQ15424 915 aaKnown RBP eCLIP11.59□□□□□ -0.55
RBM39-236ENST00000490484 LEXMQ3ZCV2 418 aa11.59□□□□□ -0.55
RBM39-236ENST00000490484 ZNF410Q86VK4 478 aa11.59□□□□□ -0.55
RBM39-236ENST00000490484 ABI1Q8IZP0 508 aa11.59□□□□□ -0.55
RBM39-236ENST00000490484 LRRC43Q8N309 656 aa11.59□□□□□ -0.55
RBM39-236ENST00000490484 ZNF579Q8NAF0 562 aaKnown RBP11.59□□□□□ -0.55
RBM39-236ENST00000490484 P2RX5Q93086 422 aa11.59□□□□□ -0.55
RBM39-236ENST00000490484 PABPC5Q96DU9 382 aaKnown RBP11.59□□□□□ -0.55
RBM39-236ENST00000490484 DYDC2Q96IM9 177 aa11.59□□□□□ -0.55
RBM39-236ENST00000490484 C8orf76Q96K31 380 aa11.59□□□□□ -0.55
RBM39-236ENST00000490484 KIF2CQ99661 725 aa11.59□□□□□ -0.55
RBM39-236ENST00000490484 JPH2Q9BR39 696 aaPredicted RBP11.59□□□□□ -0.55
RBM39-236ENST00000490484 ELAC1Q9H777 363 aaKnown RBP11.59□□□□□ -0.55
RBM39-236ENST00000490484 C5orf42Q9H799 3197 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 HOXA2O43364 376 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 IL9P15248 144 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 ATP2B1P20020 1258 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 MCM7P33993 719 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 GTF2F1P35269 517 aaKnown RBP eCLIP11.58□□□□□ -0.56
RBM39-236ENST00000490484 IRS1P35568 1242 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 RFC5P40937 340 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 TXKP42681 527 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 FAM189BP81408 668 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 HYAL1Q12794 435 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 EMC2Q15006 297 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 NAALADL2Q58DX5 795 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 XKR9Q5GH70 373 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 PTCRAQ6ISU1 281 aaPredicted RBP11.58□□□□□ -0.56
RBM39-236ENST00000490484 ECHDC2Q86YB7 292 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 TPH2Q8IWU9 490 aa11.58□□□□□ -0.56
RBM39-236ENST00000490484 C4orf19Q8IY42 314 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms