RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 MVKQ03426 396 aa6.35□□□□□ -1.39
SSX2IP-208ENST00000490476 NFE2Q16621 373 aaPredicted RBP6.35□□□□□ -1.39
SSX2IP-208ENST00000490476 MROH9Q5TGP6 573 aa6.35□□□□□ -1.39
SSX2IP-208ENST00000490476 CREB3L3Q68CJ9 461 aa6.35□□□□□ -1.39
SSX2IP-208ENST00000490476 BICRALQ6AI39 1079 aa6.35□□□□□ -1.39
SSX2IP-208ENST00000490476 OTOP1Q7RTM1 612 aa6.35□□□□□ -1.39
SSX2IP-208ENST00000490476 EFHBQ8N7U6 833 aa6.35□□□□□ -1.39
SSX2IP-208ENST00000490476 KIAA1958Q8N8K9 716 aa6.35□□□□□ -1.39
SSX2IP-208ENST00000490476 ANKS4BQ8N8V4 417 aa6.35□□□□□ -1.39
SSX2IP-208ENST00000490476 FLCNQ8NFG4 579 aa6.35□□□□□ -1.39
SSX2IP-208ENST00000490476 SH3RF2Q8TEC5 729 aa6.35□□□□□ -1.39
SSX2IP-208ENST00000490476 MS4A5Q9H3V2 200 aa6.35□□□□□ -1.39
SSX2IP-208ENST00000490476 PDLIM7Q9NR12 457 aa6.35□□□□□ -1.39
SSX2IP-208ENST00000490476 SPATA31E1Q6ZUB1 1445 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 DVL2O14641 736 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 SLC27A2O14975 620 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 AKAP10O43572 662 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 TSPAN6O43657 245 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 FBXO21O94952 628 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 SCGB1D2O95969 90 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 ZBTB48P10074 688 aaPredicted RBP6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 VEGFAP15692 232 aaPredicted RBP6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 SSTR4P31391 388 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 GALK1P51570 392 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 SCAND1P57086 179 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 SESN3P58005 492 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 ERVFC1P60507 584 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 TMEM132BQ14DG7 1078 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 STEAP3Q658P3 488 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 INTS5Q6P9B9 1019 aaKnown RBP6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 HHIPL2Q6UWX4 724 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 CABP7Q86V35 215 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 SPPL2CQ8IUH8 684 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 SIRT2Q8IXJ6 389 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 Q8N1Y9 231 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 OXR1Q8N573 874 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 CHMP4CQ96CF2 233 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 ASIC4Q96FT7 647 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 ELF4Q99607 663 aaPredicted RBP6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 SP110Q9HB58 689 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 RXFP1Q9HBX9 757 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 SLC6A20Q9NP91 592 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 C14orf119Q9NWQ9 140 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 NOB1Q9ULX3 412 aaKnown RBP6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 SRPK3Q9UPE1 567 aa6.34□□□□□ -1.39
SSX2IP-208ENST00000490476 ITSN1Q15811 1721 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 RANBP2P49792 3224 aaKnown RBP6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 USP54Q70EL1 1684 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 WASHC2AQ641Q2 1341 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 PTX3P26022 381 aaPredicted RBP6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 TRHRP34981 398 aaPredicted RBP6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 CORO7P57737 925 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 CYP4F8P98187 520 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 CHRNEQ04844 493 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 ARTNQ5T4W7 220 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 PGM2L1Q6PCE3 622 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 NOSTRINQ8IVI9 506 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 CHPFQ8IZ52 775 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 PDZD8Q8NEN9 1154 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 KRTAP4-8Q9BYQ9 185 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 GABBR1Q9UBS5 961 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 IP6K2Q9UHH9 426 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 GPR160Q9UJ42 338 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 SIT1Q9Y3P8 196 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 NOC2LQ9Y3T9 749 aaKnown RBP6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 SPO11Q9Y5K1 396 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 ATP23Q9Y6H3 246 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 LMO7Q8WWI1 1683 aa6.33□□□□□ -1.4
SSX2IP-208ENST00000490476 WDR33Q9C0J8 1336 aaKnown RBP6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 SCO2A0A1W2PP80 73 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 LCHNA4D1U4 455 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 NRDCO43847 1150 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 PSPNO60542 156 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 MED26O95402 600 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 LTFP02788 710 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 LSP1P33241 339 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 ERVK-21P61565 698 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 FAPQ12884 760 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 KLF1Q13351 362 aaPredicted RBP6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 PIN1Q13526 163 aaPredicted RBP6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 TERF2Q15554 542 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 FIGNQ5HY92 759 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 RIOX2Q8IUF8 465 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 CMIPQ8IY22 773 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 NLGN4XQ8N0W4 816 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 UHMK1Q8TAS1 419 aaKnown RBP6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 FUBP3Q96I24 572 aaKnown RBP eCLIP6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 SCYL1Q96KG9 808 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 MENTQ9BUN1 341 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 TOPORSQ9NS56 1045 aaPredicted RBP6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 RIC8BQ9NVN3 520 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 TFCP2L1Q9NZI6 479 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 RNF181Q9P0P0 153 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 CCDC39Q9UFE4 941 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 ZNF180Q9UJW8 692 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 ANGEL1Q9UNK9 670 aaKnown RBP6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 LUC7L2Q9Y383 392 aaKnown RBP6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 NAIPQ13075 1403 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 CLTCL1P53675 1640 aa6.32□□□□□ -1.4
SSX2IP-208ENST00000490476 KIAA0232Q92628 1395 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms