RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 DPF3Q92784 378 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 DVL3Q92997 716 aaPredicted RBP5.57□□□□□ -1.52
RBM39-235ENST00000490354 RCC1LQ96I51 464 aaKnown RBP5.57□□□□□ -1.52
RBM39-235ENST00000490354 SCAND2PQ9GZW5 306 aaPredicted RBP5.57□□□□□ -1.52
RBM39-235ENST00000490354 DCTPP1Q9H773 170 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 PCDH18Q9HCL0 1135 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 CWC25Q9NXE8 425 aaPredicted RBP5.57□□□□□ -1.52
RBM39-235ENST00000490354 MARCH2Q9P0N8 246 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 CLEC1BQ9P126 229 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 SUGT1Q9Y2Z0 365 aa5.57□□□□□ -1.52
RBM39-235ENST00000490354 LRRFIP2Q9Y608 721 aaKnown RBP5.57□□□□□ -1.52
RBM39-235ENST00000490354 THSD7AQ9UPZ6 1657 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 A0A1W2PQH9 124 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 CAMTA2O94983 1202 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 C6P13671 934 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 CASP7P55210 303 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 ITGA1P56199 1179 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 RACK1P63244 317 aaKnown RBP5.56□□□□□ -1.52
RBM39-235ENST00000490354 NUCB1Q02818 461 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 HLFQ16534 295 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 PRR31Q5SQ13 230 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 GLB1LQ6UWU2 654 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 CLEC4GQ6UXB4 293 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 SPRED1Q7Z699 444 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 FAM124AQ86V42 546 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 MIB1Q86YT6 1006 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 ZNF34Q8IZ26 560 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 SSH3Q8TE77 659 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 KAZALD1Q96I82 304 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 SORCS2Q96PQ0 1159 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 BACH2Q9BYV9 841 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 AP5M1Q9H0R1 490 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 GINM1Q9NU53 330 aa5.56□□□□□ -1.52
RBM39-235ENST00000490354 COL15A1P39059 1388 aa5.55□□□□□ -1.52
RBM39-235ENST00000490354 KDM3BQ7LBC6 1761 aa5.55□□□□□ -1.52
RBM39-235ENST00000490354 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.55□□□□□ -1.52
RBM39-235ENST00000490354 DDX3XO00571 662 aaKnown RBP eCLIP5.55□□□□□ -1.52
RBM39-235ENST00000490354 PCCAP05165 728 aaPredicted RBP5.55□□□□□ -1.52
RBM39-235ENST00000490354 PLS3P13797 630 aa5.55□□□□□ -1.52
RBM39-235ENST00000490354 TXNRD1Q16881 649 aa5.55□□□□□ -1.52
RBM39-235ENST00000490354 RABL6Q3YEC7 729 aaPredicted RBP5.55□□□□□ -1.52
RBM39-235ENST00000490354 PPP1R42Q7Z4L9 355 aa5.55□□□□□ -1.52
RBM39-235ENST00000490354 NLRP10Q86W26 655 aa5.55□□□□□ -1.52
RBM39-235ENST00000490354 TEX2Q8IWB9 1127 aa5.55□□□□□ -1.52
RBM39-235ENST00000490354 TTLL6Q8N841 843 aa5.55□□□□□ -1.52
RBM39-235ENST00000490354 ZBTB38Q8NAP3 1195 aaPredicted RBP5.55□□□□□ -1.52
RBM39-235ENST00000490354 SH3RF3Q8TEJ3 882 aaPredicted RBP5.55□□□□□ -1.52
RBM39-235ENST00000490354 SUCLG2Q96I99 432 aa5.55□□□□□ -1.52
RBM39-235ENST00000490354 MMP19Q99542 508 aa5.55□□□□□ -1.52
RBM39-235ENST00000490354 GPRC5CQ9NQ84 441 aa5.55□□□□□ -1.52
RBM39-235ENST00000490354 APEX2Q9UBZ4 518 aa5.55□□□□□ -1.52
RBM39-235ENST00000490354 NARFQ9UHQ1 456 aa5.55□□□□□ -1.52
RBM39-235ENST00000490354 ZNF652Q9Y2D9 606 aa5.55□□□□□ -1.52
RBM39-235ENST00000490354 PNMA6EA0A0J9YXQ4 647 aa5.54□□□□□ -1.52
RBM39-235ENST00000490354 EIF6P56537 245 aaKnown RBP5.54□□□□□ -1.52
RBM39-235ENST00000490354 SCRN1Q12765 414 aa5.54□□□□□ -1.52
RBM39-235ENST00000490354 COL9A2Q14055 689 aaPredicted RBP5.54□□□□□ -1.52
RBM39-235ENST00000490354 CDSNQ15517 529 aa5.54□□□□□ -1.52
RBM39-235ENST00000490354 PARP10Q53GL7 1025 aa5.54□□□□□ -1.52
RBM39-235ENST00000490354 HSP90AB4PQ58FF6 505 aa5.54□□□□□ -1.52
RBM39-235ENST00000490354 UBE3BQ7Z3V4 1068 aa5.54□□□□□ -1.52
RBM39-235ENST00000490354 ZC3H18Q86VM9 953 aaKnown RBP5.54□□□□□ -1.52
RBM39-235ENST00000490354 CHD1LQ86WJ1 897 aa5.54□□□□□ -1.52
RBM39-235ENST00000490354 Q8N1X5 172 aa5.54□□□□□ -1.52
RBM39-235ENST00000490354 ZNF513Q8N8E2 541 aaPredicted RBP5.54□□□□□ -1.52
RBM39-235ENST00000490354 C19orf47Q8N9M1 422 aaKnown RBP5.54□□□□□ -1.52
RBM39-235ENST00000490354 COPS5Q92905 334 aa5.54□□□□□ -1.52
RBM39-235ENST00000490354 PLA2G12BQ9BX93 195 aa5.54□□□□□ -1.52
RBM39-235ENST00000490354 BICC1Q9H694 974 aaKnown RBP5.54□□□□□ -1.52
RBM39-235ENST00000490354 AKT3Q9Y243 479 aa5.54□□□□□ -1.52
RBM39-235ENST00000490354 NOP58Q9Y2X3 529 aaKnown RBP5.54□□□□□ -1.52
RBM39-235ENST00000490354 DLG5Q8TDM6 1919 aa5.54□□□□□ -1.52
RBM39-235ENST00000490354 SHANK3Q9BYB0 1731 aa5.54□□□□□ -1.52
RBM39-235ENST00000490354 SCN11AQ9UI33 1791 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 B4GALT3O60512 393 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 RAB11FIP3O75154 756 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 KCNH1O95259 989 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 THBDP07204 575 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 CSF1RP07333 972 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 HSP90B1P14625 803 aaKnown RBP5.53□□□□□ -1.52
RBM39-235ENST00000490354 TACR2P21452 398 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 GPTP24298 496 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 RFC4P35249 363 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 STAT5AP42229 794 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 GIPRP48546 466 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 PAK2Q13177 524 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 INF2Q27J81 1249 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 EPHA10Q5JZY3 1008 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 ANKRD45Q5TZF3 282 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 SEC14L1Q92503 715 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 LCORQ96JN0 433 aaPredicted RBP5.53□□□□□ -1.52
RBM39-235ENST00000490354 UTP14AQ9BVJ6 771 aaKnown RBP5.53□□□□□ -1.52
RBM39-235ENST00000490354 METTL5Q9NRN9 209 aaKnown RBP5.53□□□□□ -1.52
RBM39-235ENST00000490354 PPP4R1LQ9P1A2 415 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 TRMT112Q9UI30 125 aaKnown RBP5.53□□□□□ -1.52
RBM39-235ENST00000490354 DDX41Q9UJV9 622 aaKnown RBP5.53□□□□□ -1.52
RBM39-235ENST00000490354 NIP7Q9Y221 180 aaKnown RBP eCLIP5.53□□□□□ -1.52
RBM39-235ENST00000490354 EFR3BQ9Y2G0 817 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 TOGARAM1Q9Y4F4 1720 aa5.53□□□□□ -1.52
RBM39-235ENST00000490354 SIPA1L3O60292 1781 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms