RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 TTC12Q9H892 705 aaPredicted RBP22.12■■□□□ 1.13
SMC4-222ENST00000490207 RNF216Q9NWF9 866 aaPredicted RBP22.12■■□□□ 1.13
SMC4-222ENST00000490207 PCDHA12Q9UN75 941 aa22.12■■□□□ 1.13
SMC4-222ENST00000490207 PPME1Q9Y570 386 aa22.12■■□□□ 1.13
SMC4-222ENST00000490207 DARSP14868 501 aaKnown RBP22.11■■□□□ 1.13
SMC4-222ENST00000490207 YWHABP31946 246 aaKnown RBP22.11■■□□□ 1.13
SMC4-222ENST00000490207 MCM7P33993 719 aa22.11■■□□□ 1.13
SMC4-222ENST00000490207 TXKP42681 527 aa22.11■■□□□ 1.13
SMC4-222ENST00000490207 NPEPPSP55786 919 aa22.11■■□□□ 1.13
SMC4-222ENST00000490207 GNL2Q13823 731 aaKnown RBP22.11■■□□□ 1.13
SMC4-222ENST00000490207 CTTNQ14247 550 aaKnown RBP22.11■■□□□ 1.13
SMC4-222ENST00000490207 DSC3Q14574 896 aa22.11■■□□□ 1.13
SMC4-222ENST00000490207 TJAP1Q5JTD0 557 aa22.11■■□□□ 1.13
SMC4-222ENST00000490207 SLC24A5Q71RS6 500 aa22.11■■□□□ 1.13
SMC4-222ENST00000490207 CLP1Q92989 425 aaKnown RBP22.11■■□□□ 1.13
SMC4-222ENST00000490207 CEP170P1Q96L14 293 aa22.11■■□□□ 1.13
SMC4-222ENST00000490207 ZSWIM4Q9H7M6 989 aa22.11■■□□□ 1.13
SMC4-222ENST00000490207 SUCLA2Q9P2R7 463 aaPredicted RBP22.11■■□□□ 1.13
SMC4-222ENST00000490207 PCDHB7Q9Y5E2 793 aa22.11■■□□□ 1.13
SMC4-222ENST00000490207 C9IYK1 514 aa22.1■■□□□ 1.13
SMC4-222ENST00000490207 C5orf67F2Z3F1 127 aa22.1■■□□□ 1.13
SMC4-222ENST00000490207 GATMP50440 423 aa22.1■■□□□ 1.13
SMC4-222ENST00000490207 POLGP54098 1239 aaPredicted RBP22.1■■□□□ 1.13
SMC4-222ENST00000490207 CDC42EP1Q00587 391 aa22.1■■□□□ 1.13
SMC4-222ENST00000490207 PTPROQ16827 1216 aa22.1■■□□□ 1.13
SMC4-222ENST00000490207 ZNF410Q86VK4 478 aa22.1■■□□□ 1.13
SMC4-222ENST00000490207 RHPN2Q8IUC4 686 aa22.1■■□□□ 1.13
SMC4-222ENST00000490207 IL27Q8NEV9 243 aa22.1■■□□□ 1.13
SMC4-222ENST00000490207 NEK9Q8TD19 979 aa22.1■■□□□ 1.13
SMC4-222ENST00000490207 SLC7A3Q8WY07 619 aa22.1■■□□□ 1.13
SMC4-222ENST00000490207 MTMR9Q96QG7 549 aa22.1■■□□□ 1.13
SMC4-222ENST00000490207 EIF2AK1Q9BQI3 630 aaKnown RBP22.1■■□□□ 1.13
SMC4-222ENST00000490207 GCOM2Q9BZD3 368 aaPredicted RBP22.1■■□□□ 1.13
SMC4-222ENST00000490207 TMEM60Q9H2L4 133 aa22.1■■□□□ 1.13
SMC4-222ENST00000490207 MRPL42Q9Y6G3 142 aaKnown RBP22.1■■□□□ 1.13
SMC4-222ENST00000490207 SPTBN5Q9NRC6 3674 aaKnown RBP22.1■■□□□ 1.13
SMC4-222ENST00000490207 RB1P06400 928 aa22.09■■□□□ 1.13
SMC4-222ENST00000490207 ZSCAN20P17040 1043 aaPredicted RBP22.09■■□□□ 1.13
SMC4-222ENST00000490207 BMPR1AP36894 532 aa22.09■■□□□ 1.13
SMC4-222ENST00000490207 RFC5P40937 340 aa22.09■■□□□ 1.13
SMC4-222ENST00000490207 ORC2Q13416 577 aaPredicted RBP22.09■■□□□ 1.13
SMC4-222ENST00000490207 OTUD6AQ7L8S5 288 aa22.09■■□□□ 1.13
SMC4-222ENST00000490207 TPH2Q8IWU9 490 aa22.09■■□□□ 1.13
SMC4-222ENST00000490207 ZNF579Q8NAF0 562 aaKnown RBP22.09■■□□□ 1.13
SMC4-222ENST00000490207 MRPL38Q96DV4 380 aaKnown RBP22.09■■□□□ 1.13
SMC4-222ENST00000490207 TBC1D32Q96NH3 1257 aa22.09■■□□□ 1.13
SMC4-222ENST00000490207 C11orf84Q9BUA3 381 aaPredicted RBP22.09■■□□□ 1.13
SMC4-222ENST00000490207 A0A087WZ62 844 aa22.08■■□□□ 1.13
SMC4-222ENST00000490207 POTEMA6NI47 508 aa22.08■■□□□ 1.13
SMC4-222ENST00000490207 FGFR4P22455 802 aa22.08■■□□□ 1.13
SMC4-222ENST00000490207 MRPS5P82675 430 aaKnown RBP22.08■■□□□ 1.13
SMC4-222ENST00000490207 TIGD5Q53EQ6 642 aa22.08■■□□□ 1.13
SMC4-222ENST00000490207 XKR9Q5GH70 373 aa22.08■■□□□ 1.13
SMC4-222ENST00000490207 NOSTRINQ8IVI9 506 aa22.08■■□□□ 1.13
SMC4-222ENST00000490207 EXOC8Q8IYI6 725 aa22.08■■□□□ 1.13
SMC4-222ENST00000490207 SYMPKQ92797 1274 aaKnown RBP22.08■■□□□ 1.13
SMC4-222ENST00000490207 ASB2Q96Q27 587 aa22.08■■□□□ 1.13
SMC4-222ENST00000490207 FDXACB1Q9BRP7 624 aaPredicted RBP22.08■■□□□ 1.13
SMC4-222ENST00000490207 DHX33Q9H6R0 707 aaKnown RBP22.08■■□□□ 1.13
SMC4-222ENST00000490207 BMP2KQ9NSY1 1161 aaPredicted RBP22.08■■□□□ 1.13
SMC4-222ENST00000490207 TMEM161AQ9NX61 479 aa22.08■■□□□ 1.13
SMC4-222ENST00000490207 KIF3AQ9Y496 699 aa22.08■■□□□ 1.13
SMC4-222ENST00000490207 SLITRK3O94933 977 aa22.07■■□□□ 1.12
SMC4-222ENST00000490207 CD2BP2O95400 341 aaKnown RBP22.07■■□□□ 1.12
SMC4-222ENST00000490207 SFPQP23246 707 aaKnown RBP eCLIP22.07■■□□□ 1.12
SMC4-222ENST00000490207 EMC2Q15006 297 aa22.07■■□□□ 1.12
SMC4-222ENST00000490207 TTC38Q5R3I4 469 aa22.07■■□□□ 1.12
SMC4-222ENST00000490207 TMX3Q96JJ7 454 aa22.07■■□□□ 1.12
SMC4-222ENST00000490207 NLRP4Q96MN2 994 aa22.07■■□□□ 1.12
SMC4-222ENST00000490207 ELAC1Q9H777 363 aaKnown RBP22.07■■□□□ 1.12
SMC4-222ENST00000490207 ATP6V0A4Q9HBG4 840 aa22.07■■□□□ 1.12
SMC4-222ENST00000490207 NOL7Q9UMY1 257 aaKnown RBP22.07■■□□□ 1.12
SMC4-222ENST00000490207 COG5Q9UP83 839 aa22.07■■□□□ 1.12
SMC4-222ENST00000490207 COL4A3BPQ9Y5P4 624 aa22.07■■□□□ 1.12
SMC4-222ENST00000490207 PLXNA4Q9HCM2 1894 aa22.07■■□□□ 1.12
SMC4-222ENST00000490207 TBKBP1A7MCY6 615 aa22.06■■□□□ 1.12
SMC4-222ENST00000490207 ZBTB39O15060 712 aa22.06■■□□□ 1.12
SMC4-222ENST00000490207 GAS2O43903 313 aaKnown RBP22.06■■□□□ 1.12
SMC4-222ENST00000490207 CSDE1O75534 798 aaKnown RBP22.06■■□□□ 1.12
SMC4-222ENST00000490207 LYPLA2O95372 231 aa22.06■■□□□ 1.12
SMC4-222ENST00000490207 OR52Z1P0C646 297 aa22.06■■□□□ 1.12
SMC4-222ENST00000490207 TFF2Q03403 129 aa22.06■■□□□ 1.12
SMC4-222ENST00000490207 ZNF174Q15697 407 aa22.06■■□□□ 1.12
SMC4-222ENST00000490207 FAM102BQ5T8I3 360 aa22.06■■□□□ 1.12
SMC4-222ENST00000490207 KSR1Q8IVT5 923 aa22.06■■□□□ 1.12
SMC4-222ENST00000490207 PSPC1Q8WXF1 523 aaKnown RBP22.06■■□□□ 1.12
SMC4-222ENST00000490207 CCDC43Q96MW1 224 aaKnown RBP22.06■■□□□ 1.12
SMC4-222ENST00000490207 HSD17B14Q9BPX1 270 aa22.06■■□□□ 1.12
SMC4-222ENST00000490207 PLVAPQ9BX97 442 aa22.06■■□□□ 1.12
SMC4-222ENST00000490207 INO80BQ9C086 356 aaPredicted RBP22.06■■□□□ 1.12
SMC4-222ENST00000490207 VCANP13611 3396 aa22.05■■□□□ 1.12
SMC4-222ENST00000490207 TRAPPC10P48553 1259 aa22.05■■□□□ 1.12
SMC4-222ENST00000490207 MCM2P49736 904 aa22.05■■□□□ 1.12
SMC4-222ENST00000490207 FAM189BP81408 668 aa22.05■■□□□ 1.12
SMC4-222ENST00000490207 AAK1Q2M2I8 961 aa22.05■■□□□ 1.12
SMC4-222ENST00000490207 TCP11Q8WWU5 503 aa22.05■■□□□ 1.12
SMC4-222ENST00000490207 HLA-CQ95604 372 aa22.05■■□□□ 1.12
SMC4-222ENST00000490207 TMEM143Q96AN5 459 aa22.05■■□□□ 1.12
SMC4-222ENST00000490207 MTRQ99707 1265 aa22.05■■□□□ 1.12
SMC4-222ENST00000490207 LMAN2LQ9H0V9 348 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms