RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 SAFBQ15424 915 aaKnown RBP eCLIP5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 TRADDQ15628 312 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 MTHFSDQ2M296 383 aaKnown RBP5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 RILPL1Q5EBL4 403 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 FIGNQ5HY92 759 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 KLHDC7AQ5VTJ3 777 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 RRAGBQ5VZM2 374 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 TBC1D9BQ66K14 1250 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 CHST3Q7LGC8 479 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 NME9Q86XW9 330 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 NOSTRINQ8IVI9 506 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 ZSCAN29Q8IWY8 852 aaPredicted RBP5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNF511Q8NB15 262 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 TBC1D16Q8TBP0 767 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 HELQQ8TDG4 1101 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 UCMAQ8WVF2 138 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 ZNF775Q96BV0 537 aaPredicted RBP5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 MS4A14Q96JA4 679 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 MAML3Q96JK9 1138 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 C8orf37Q96NL8 207 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 ARPC5LQ9BPX5 153 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 CENPKQ9BS16 269 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 TTYH3Q9C0H2 523 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 LRMDAQ9H2I8 198 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 ESF1Q9H501 851 aaKnown RBP5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 MLXIPQ9HAP2 919 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 INTS9Q9NV88 658 aaKnown RBP5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 RHBDL2Q9NX52 303 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 TLR7Q9NYK1 1049 aaKnown RBP5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 C9orf78Q9NZ63 289 aaPredicted RBP5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 EHD2Q9NZN4 543 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 NDUFA13Q9P0J0 144 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 HSFX1Q9UBD0 423 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 TMEM59LQ9UK28 342 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 TMED5Q9Y3A6 229 aa5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 XIRP1Q702N8 1843 aaKnown RBP5.15□□□□□ -1.58
SNRNP40-206ENST00000489853 PI4KAP2A4QPH2 592 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 TMEM247A6NEH6 219 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 CCDC169A6NNP5 214 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 DCDC2CA8MYV0 355 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 ZNF263O14978 683 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 BIRC5O15392 142 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 ATP9AO75110 1047 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 GFPT2O94808 682 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 UNC5CO95185 931 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 HSPD1P10809 573 aaKnown RBP5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 HARSP12081 509 aaKnown RBP5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 KCNA3P22001 575 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 SMARCA1P28370 1054 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 AFMP43652 599 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 OXCT1P55809 520 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 ERVK-9P63128 1117 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 RCN2Q14257 317 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 CLPPQ16740 277 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 SLC44A4Q53GD3 710 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 FAM26DQ5JW98 314 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 C6orf118Q5T5N4 469 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 RNF43Q68DV7 783 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 KLC3Q6P597 504 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 COL23A1Q86Y22 540 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 IRF2BP1Q8IU81 584 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 PI4KAP1Q8N8J0 262 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 ATP11CQ8NB49 1132 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 ERMNQ8TAM6 284 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 NELFBQ8WX92 580 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 SCG3Q8WXD2 468 aaKnown RBP5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 INPP5DQ92835 1189 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 FERMT2Q96AC1 680 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 LENG1Q96BZ8 264 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 HAUS1Q96CS2 278 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 CLMNQ96JQ2 1002 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 OLFM3Q96PB7 478 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 HAUS7Q99871 368 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 DDX23Q9BUQ8 820 aaKnown RBP5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 OXCT2Q9BYC2 517 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 STMN4Q9H169 189 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 TSPAN10Q9H1Z9 355 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 ADAM7Q9H2U9 754 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 ETNK1Q9HBU6 452 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 AGPAT5Q9NUQ2 364 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 DDX43Q9NXZ2 648 aaKnown RBP5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 TUBA8Q9NY65 449 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 PRKAG3Q9UGI9 489 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 PNMA2Q9UL42 364 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 INTUQ9ULD6 942 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 CHMP2BQ9UQN3 213 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 USP20Q9Y2K6 914 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 MYH7P12883 1935 aa5.15□□□□□ -1.59
SNRNP40-206ENST00000489853 CPS1P31327 1500 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 PDS5AQ29RF7 1337 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 MYH13Q9UKX3 1938 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 BCL9LQ86UU0 1499 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 LAMA4Q16363 1823 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 TMEM94Q12767 1356 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 GOLGA8AA7E2F4 631 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 WNT7AO00755 349 aa5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 WDR46O15213 610 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 HNRNPRO43390 633 aaKnown RBP5.14□□□□□ -1.59
SNRNP40-206ENST00000489853 FOXO3O43524 673 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms