RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 PNMA1Q8ND90 353 aa16.83■□□□□ 0.28
SDHAF3-204ENST00000489852 TRAPPC12Q8WVT3 735 aa16.83■□□□□ 0.28
SDHAF3-204ENST00000489852 TMEM40Q8WWA1 233 aa16.83■□□□□ 0.28
SDHAF3-204ENST00000489852 BBXQ8WY36 941 aaPredicted RBP16.83■□□□□ 0.28
SDHAF3-204ENST00000489852 MYL10Q9BUA6 226 aa16.83■□□□□ 0.28
SDHAF3-204ENST00000489852 LRRCC1Q9C099 1032 aa16.83■□□□□ 0.28
SDHAF3-204ENST00000489852 CDHR5Q9HBB8 845 aa16.83■□□□□ 0.28
SDHAF3-204ENST00000489852 FLNBO75369 2602 aaKnown RBP16.82■□□□□ 0.28
SDHAF3-204ENST00000489852 SRRM3A6NNA2 597 aaPredicted RBP16.82■□□□□ 0.28
SDHAF3-204ENST00000489852 KLRC2P26717 231 aa16.82■□□□□ 0.28
SDHAF3-204ENST00000489852 CLCN4P51793 760 aa16.82■□□□□ 0.28
SDHAF3-204ENST00000489852 WTAPQ15007 396 aa16.82■□□□□ 0.28
SDHAF3-204ENST00000489852 TSHZ3Q63HK5 1081 aa16.82■□□□□ 0.28
SDHAF3-204ENST00000489852 PRR23BQ6ZRT6 265 aa16.82■□□□□ 0.28
SDHAF3-204ENST00000489852 TNPO1Q92973 898 aaKnown RBP16.82■□□□□ 0.28
SDHAF3-204ENST00000489852 GPATCH3Q96I76 525 aa16.82■□□□□ 0.28
SDHAF3-204ENST00000489852 ZKSCAN3Q9BRR0 538 aa16.82■□□□□ 0.28
SDHAF3-204ENST00000489852 NUMBLQ9Y6R0 609 aa16.82■□□□□ 0.28
SDHAF3-204ENST00000489852 CCDC195A0A1B0GUA6 201 aa16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 TRIM6-TRIM34B2RNG4 842 aa16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 ANHXE9PGG2 379 aa16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 FOXD2O60548 495 aaPredicted RBP16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 PPP1R11O60927 126 aaPredicted RBP16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 LAMP2P13473 410 aa16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 GPC5P78333 572 aa16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 PRKCQQ04759 706 aa16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 HTR4Q13639 388 aa16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 PLCB4Q15147 1175 aa16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 MLF2Q15773 248 aaPredicted RBP16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 VPS53Q5VIR6 699 aa16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 DDX53Q86TM3 631 aaKnown RBP16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 DGKHQ86XP1 1220 aa16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 ST13P5Q8NFI4 369 aaPredicted RBP16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 CMASQ8NFW8 434 aaPredicted RBP16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 EMILIN2Q9BXX0 1053 aa16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 PRMT8Q9NR22 394 aaPredicted RBP16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 LAMA4Q16363 1823 aa16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 COL4A3Q01955 1670 aa16.81■□□□□ 0.28
SDHAF3-204ENST00000489852 TMEM8BA6NDV4 472 aa16.8■□□□□ 0.28
SDHAF3-204ENST00000489852 PARP1P09874 1014 aaKnown RBP16.8■□□□□ 0.28
SDHAF3-204ENST00000489852 NRLP54845 237 aa16.8■□□□□ 0.28
SDHAF3-204ENST00000489852 DSC3Q14574 896 aa16.8■□□□□ 0.28
SDHAF3-204ENST00000489852 CLLU1OSQ5K130 101 aa16.8■□□□□ 0.28
SDHAF3-204ENST00000489852 ZBTB41Q5SVQ8 909 aa16.8■□□□□ 0.28
SDHAF3-204ENST00000489852 CYP26C1Q6V0L0 522 aa16.8■□□□□ 0.28
SDHAF3-204ENST00000489852 TMEM173Q86WV6 379 aaPredicted RBP16.8■□□□□ 0.28
SDHAF3-204ENST00000489852 RNF169Q8NCN4 708 aa16.8■□□□□ 0.28
SDHAF3-204ENST00000489852 KLHL5Q96PQ7 755 aa16.8■□□□□ 0.28
SDHAF3-204ENST00000489852 KAT14Q9H8E8 782 aa16.8■□□□□ 0.28
SDHAF3-204ENST00000489852 LTB4R2Q9NPC1 389 aa16.8■□□□□ 0.28
SDHAF3-204ENST00000489852 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.8■□□□□ 0.28
SDHAF3-204ENST00000489852 RALGAPA1Q6GYQ0 2036 aa16.8■□□□□ 0.28
SDHAF3-204ENST00000489852 WDFY3Q8IZQ1 3526 aa16.8■□□□□ 0.28
SDHAF3-204ENST00000489852 DOCK8Q8NF50 2099 aa16.79■□□□□ 0.28
SDHAF3-204ENST00000489852 FRMPD4Q14CM0 1322 aa16.79■□□□□ 0.28
SDHAF3-204ENST00000489852 TAF4O00268 1085 aa16.79■□□□□ 0.28
SDHAF3-204ENST00000489852 TM4SF5O14894 197 aa16.79■□□□□ 0.28
SDHAF3-204ENST00000489852 ALX1Q15699 326 aa16.79■□□□□ 0.28
SDHAF3-204ENST00000489852 SLC44A4Q53GD3 710 aa16.79■□□□□ 0.28
SDHAF3-204ENST00000489852 MTHFD1LQ6UB35 978 aa16.79■□□□□ 0.28
SDHAF3-204ENST00000489852 NLRX1Q86UT6 975 aa16.79■□□□□ 0.28
SDHAF3-204ENST00000489852 FAM228AQ86W67 206 aa16.79■□□□□ 0.28
SDHAF3-204ENST00000489852 MAN1C1Q9NR34 630 aa16.79■□□□□ 0.28
SDHAF3-204ENST00000489852 ASH1LQ9NR48 2969 aaKnown RBP16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 ZBTB5O15062 677 aa16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 NCAM2O15394 837 aa16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 ATP9AO75110 1047 aa16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 CD72P21854 359 aa16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 LIMK1P53667 647 aa16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 RSPO2Q6UXX9 243 aaPredicted RBP16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 MFSD6Q6ZSS7 791 aa16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 ECHDC2Q86YB7 292 aa16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 HELQQ8TDG4 1101 aa16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 MAP4K1Q92918 833 aa16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 CLDN23Q96B33 292 aa16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 IGSF21Q96ID5 467 aa16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 RPP25Q9BUL9 199 aaKnown RBP16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 MRPL9Q9BYD2 267 aaKnown RBP16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 RHOBTB2Q9BYZ6 727 aa16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 NBEAQ8NFP9 2946 aa16.78■□□□□ 0.28
SDHAF3-204ENST00000489852 INPPL1O15357 1258 aa16.77■□□□□ 0.28
SDHAF3-204ENST00000489852 ZC3H11AO75152 810 aaKnown RBP eCLIP16.77■□□□□ 0.28
SDHAF3-204ENST00000489852 KCNK5O95279 499 aa16.77■□□□□ 0.28
SDHAF3-204ENST00000489852 FGAP02671 866 aa16.77■□□□□ 0.28
SDHAF3-204ENST00000489852 CNPP09543 421 aaKnown RBP16.77■□□□□ 0.28
SDHAF3-204ENST00000489852 KCNA2P16389 499 aa16.77■□□□□ 0.28
SDHAF3-204ENST00000489852 AASDHQ4L235 1098 aaPredicted RBP16.77■□□□□ 0.28
SDHAF3-204ENST00000489852 GET4Q7L5D6 327 aaPredicted RBP16.77■□□□□ 0.28
SDHAF3-204ENST00000489852 SMG7Q92540 1137 aaKnown RBP16.77■□□□□ 0.28
SDHAF3-204ENST00000489852 PCYT2Q99447 389 aa16.77■□□□□ 0.28
SDHAF3-204ENST00000489852 OSMRQ99650 979 aa16.77■□□□□ 0.28
SDHAF3-204ENST00000489852 AZI2Q9H6S1 392 aa16.77■□□□□ 0.28
SDHAF3-204ENST00000489852 ZSCAN20P17040 1043 aaPredicted RBP16.76■□□□□ 0.27
SDHAF3-204ENST00000489852 KLRC1P26715 233 aa16.76■□□□□ 0.27
SDHAF3-204ENST00000489852 RPS9P46781 194 aaKnown RBP16.76■□□□□ 0.27
SDHAF3-204ENST00000489852 CRYBB1P53674 252 aaPredicted RBP16.76■□□□□ 0.27
SDHAF3-204ENST00000489852 HAND2P61296 217 aa16.76■□□□□ 0.27
SDHAF3-204ENST00000489852 TRAF1Q13077 416 aa16.76■□□□□ 0.27
SDHAF3-204ENST00000489852 MTAPQ13126 283 aa16.76■□□□□ 0.27
SDHAF3-204ENST00000489852 SIM2Q14190 667 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms