RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 SOX10P56693 466 aa17.11■□□□□ 0.33
BRD9-208ENST00000489816 GNGT1P63211 74 aa17.11■□□□□ 0.33
BRD9-208ENST00000489816 ZNF341Q9BYN7 854 aa17.11■□□□□ 0.33
BRD9-208ENST00000489816 GOPCQ9HD26 462 aa17.11■□□□□ 0.33
BRD9-208ENST00000489816 FRMD4BQ9Y2L6 1034 aa17.11■□□□□ 0.33
BRD9-208ENST00000489816 FOXN3O00409 490 aaPredicted RBP17.1■□□□□ 0.33
BRD9-208ENST00000489816 KRIT1O00522 736 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 ENTPD3O75355 529 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 FLT3P36888 993 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 ERVK-9P63128 1117 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 SLC20A1Q8WUM9 679 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 CBWD1Q9BRT8 395 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 RAVER2Q9HCJ3 691 aaKnown RBP17.1■□□□□ 0.33
BRD9-208ENST00000489816 CWC15Q9P013 229 aaKnown RBP17.1■□□□□ 0.33
BRD9-208ENST00000489816 SIPA1L1O43166 1804 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 SART1O43290 800 aaKnown RBP17.1■□□□□ 0.33
BRD9-208ENST00000489816 CALCAP01258 141 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 HDLBPQ00341 1268 aaKnown RBP17.1■□□□□ 0.33
BRD9-208ENST00000489816 EN1Q05925 392 aaPredicted RBP17.1■□□□□ 0.33
BRD9-208ENST00000489816 SF3A3Q12874 501 aaKnown RBP eCLIP17.1■□□□□ 0.333e-7■■■■□ 22.6
BRD9-208ENST00000489816 CCDC127Q96BQ5 260 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 ARHGEF26Q96DR7 871 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 METTL14Q9HCE5 456 aaKnown RBP17.1■□□□□ 0.33
BRD9-208ENST00000489816 KCNH7Q9NS40 1196 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 TMOD4Q9NZQ9 345 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 PPP1R9AQ9ULJ8 1098 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 USP20Q9Y2K6 914 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 PPP1R12BO60237 982 aaPredicted RBP17.1■□□□□ 0.33
BRD9-208ENST00000489816 BUB1BO60566 1050 aaPredicted RBP17.1■□□□□ 0.33
BRD9-208ENST00000489816 NNTQ13423 1086 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 PHLDB3Q6NSJ2 640 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 DAW1Q8N136 415 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 SLC35G2Q8TBE7 412 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 FIZ1Q96SL8 496 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 PLCB1Q9NQ66 1216 aa17.1■□□□□ 0.33
BRD9-208ENST00000489816 NOC2LQ9Y3T9 749 aaKnown RBP17.1■□□□□ 0.33
BRD9-208ENST00000489816 ZNF233A6NK53 670 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 IRAK1P51617 712 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 NPEPPSP55786 919 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 PDE4CQ08493 712 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 PADI6Q6TGC4 694 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 BTNL9Q6UXG8 535 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 VPS36Q86VN1 386 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 ZC3H3Q8IXZ2 948 aaKnown RBP17.09■□□□□ 0.33
BRD9-208ENST00000489816 CNKSR1Q969H4 720 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 NEUROG2Q9H2A3 272 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 UBE2TQ9NPD8 197 aaPredicted RBP17.09■□□□□ 0.33
BRD9-208ENST00000489816 DAPK3O43293 454 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 ATMINO43313 823 aaPredicted RBP17.09■□□□□ 0.33
BRD9-208ENST00000489816 GUCY1A3Q02108 690 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 MUM1L1Q5H9M0 696 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 MIER3Q7Z3K6 550 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 BCAS4Q8TDM0 211 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 NACC1Q96RE7 527 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 THAP2Q9H0W7 228 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 TSKSQ9UJT2 592 aa17.09■□□□□ 0.33
BRD9-208ENST00000489816 F8VZ95 297 aa17.08■□□□□ 0.33
BRD9-208ENST00000489816 TTI1O43156 1089 aa17.08■□□□□ 0.33
BRD9-208ENST00000489816 EGFRP00533 1210 aa17.08■□□□□ 0.33
BRD9-208ENST00000489816 MMP14P50281 582 aa17.08■□□□□ 0.33
BRD9-208ENST00000489816 PRAMEF18Q5VWM3 479 aa17.08■□□□□ 0.33
BRD9-208ENST00000489816 PLA2G4FQ68DD2 849 aa17.08■□□□□ 0.33
BRD9-208ENST00000489816 PHLDB2Q86SQ0 1253 aa17.08■□□□□ 0.33
BRD9-208ENST00000489816 LRRC57Q8N9N7 239 aa17.08■□□□□ 0.33
BRD9-208ENST00000489816 CHURC1Q8WUH1 139 aa17.08■□□□□ 0.33
BRD9-208ENST00000489816 POP1Q99575 1024 aaKnown RBP17.08■□□□□ 0.33
BRD9-208ENST00000489816 CAPS2Q9BXY5 557 aa17.08■□□□□ 0.33
BRD9-208ENST00000489816 VCPKMTQ9H867 229 aa17.08■□□□□ 0.33
BRD9-208ENST00000489816 OLFML3Q9NRN5 406 aa17.08■□□□□ 0.33
BRD9-208ENST00000489816 PPP1R1BQ9UD71 204 aaPredicted RBP17.08■□□□□ 0.33
BRD9-208ENST00000489816 BACH1O14867 736 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 FGGP02679 453 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 PAK2Q13177 524 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 CEP85LQ5SZL2 805 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 EMBQ6PCB8 327 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 ZNF572Q7Z3I7 529 aaPredicted RBP17.08■□□□□ 0.32
BRD9-208ENST00000489816 CPNE8Q86YQ8 564 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 MSL3Q8N5Y2 521 aaKnown RBP17.08■□□□□ 0.32
BRD9-208ENST00000489816 C7orf43Q8WVR3 580 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 SLC5A5Q92911 643 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 BORCS6Q96GS4 357 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 TRIM51Q9BSJ1 452 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 COL11A2P13942 1736 aaPredicted RBP17.08■□□□□ 0.32
BRD9-208ENST00000489816 EMSYQ7Z589 1322 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 LRRC37AA6NMS7 1700 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 CYP3A4P08684 503 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 SOX5P35711 763 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 SRLQ86TD4 932 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 TEKT3Q9BXF9 490 aa17.08■□□□□ 0.32
BRD9-208ENST00000489816 INTS2Q9H0H0 1204 aaKnown RBP17.08■□□□□ 0.32
BRD9-208ENST00000489816 SLC16A4O15374 487 aa17.07■□□□□ 0.32
BRD9-208ENST00000489816 TNFAIP3P21580 790 aa17.07■□□□□ 0.32
BRD9-208ENST00000489816 TNNC1P63316 161 aa17.07■□□□□ 0.32
BRD9-208ENST00000489816 MYL7Q01449 175 aa17.07■□□□□ 0.32
BRD9-208ENST00000489816 ITIH3Q06033 890 aa17.07■□□□□ 0.32
BRD9-208ENST00000489816 RSBN1LQ6PCB5 846 aaPredicted RBP17.07■□□□□ 0.32
BRD9-208ENST00000489816 FOXR2Q6PJQ5 311 aa17.07■□□□□ 0.32
BRD9-208ENST00000489816 NSMFQ6X4W1 530 aa17.07■□□□□ 0.32
BRD9-208ENST00000489816 MRIQ9BWK5 157 aa17.07■□□□□ 0.32
BRD9-208ENST00000489816 GDF3Q9NR23 364 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms